GenBank-Updates@genbank.bio.net (05/22/91)
LOCUS SHPSAT01 816 bp ds-DNA MAM 22-MAY-1991
DEFINITION Sheep 1.714 satellite DNA repeat unit
ACCESSION X01839
KEYWORDS direct repeat; inverted repeat; satellite DNA; tandem repeat.
SOURCE Ovis sp. DNA.
ORGANISM Ovis sp.
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Artiodactyla; Ruminantia; Pecora; Bovidae.
REFERENCE 1 (bases 1 to 816)
AUTHORS Reisner,A.H. and Bucholtz,C.A.
TITLE Apparent relatedness of the main component of ovine 1.714 satellite
DNA to bovine 1.715 satellite DNA
JOURNAL EMBO J. 2, 1145-1149 (1983)
STANDARD full automatic
COMMENT From EMBL 26 entry OASAT01; dated 06-JUL-1989.
FEATURES Location/Qualifiers
repeat_region 1..816
/note="1.714 satellite DNA repeat unit"
repeat_region 4..18
/note="15 bp repeat"
repeat_region 34..48
/note="15 bp repeat"
misc_feature 61..80
/note="20 bp reverse complementary sequence"
misc_feature 63..92
/note="sequence homologous to bovine 1.715 satellite DNA"
repeat_region 64..78
/note="15 bp repeat"
misc_feature 75..141
/note="sequence homologous to bovine 1.715 sat. DNA"
repeat_region 95..109
/note="15 bp repeat"
repeat_region 219..233
/note="15 bp repeat"
repeat_region 395..409
/note="15 bp repeat"
misc_feature 435..471
/note="pot. hairpin structure"
misc_feature 455..474
/note="20 bp reverse complementary sequence"
misc_feature 456..471
/note="pot. hairpin structure"
repeat_region 457..471
/note="15 bp repeat"
misc_feature 548..612
/note="tandem 13 bp pentameric repeat"
misc_feature 654..678
/note="pot. hairpin structure"
misc_feature 755..813
/note="sequence homologous to bovine 1.715 sat. DNA"
repeat_region 758..772
/note="15 bp repeat"
BASE COUNT 152 a 217 c 247 g 200 t
ORIGIN
1 ccctcatctc gagctacgag gcggaaacgg ggctcctctc gatgtgcgcg ggaccctcgt
61 gcttcctctc gagtggagac gggtatgtcg gggaacttct tgagttgcag caagggtgtg
121 aaggagcttt tttaagttcc agaggttagg tgtaattagc ctcgagaagc ctcagtggaa
181 atgggcctca tttcacctgg agggcaaaac ctcctggatt ttcttgagtt ggggcaggtg
241 ttctcgactt acgatgggga cctcacggac cccctctggt ggcctcagga ctggccaatc
301 cccattcgag ttgctcgggg gactctcggg attcctctcg catccatgca gggaccgaag
361 accttgtgtg gagtcgggcc cggaacctga ggattcctct ccagtgctga cttggacctt
421 ggggtactta tagagtctcc ccaggggagt cagttctcct ctcgagaggg ggcatgcacg
481 tgcgctttcc tcccgaactt agcagcaatg tcatgcttcc gttcgcgtca gtcatgggat
541 ctgtggcttt ccctcgagga tttcccacga ggctttccca cgaggctttc ccacacggct
601 gttccacgtg ccatcgtggt gggagtcgat cctcggcgtg aaaatcgagg cagtgcaggg
661 aaaacagttt tctctggaat ggactgagac atctggggga cactgggaat gttggcacga
721 cgctggagtt cctctctcct ttcctgtgga gagcgcctcc tcttgagatg cgacgggaac
781 gcctggaatt ctttcccgac caataaggga aaggat
//