GenBank-Updates@genbank.bio.net (05/22/91)
LOCUS CHLCERR23 1387 bp ds-DNA ORG 22-MAY-1991
DEFINITION Chlorella ellipsoidea plastid DNA for 23S RNA upstream region with
tRNA-Ala and tRNA-Ser (part.) genes
ACCESSION X05693
KEYWORDS 23S ribosomal RNA; alpha repetitive sequence; repetitive sequence;
ribosomal RNA; transfer RNA; transfer RNA-Ala; transfer RNA-Ser.
SOURCE Chloroplast Chlorella ellipsoidea DNA.
ORGANISM Chloroplast Chlorella ellipsoidea
Eukaryota; Plantae; Thallobionta; Chlorophycota; Chlorophyceae;
Chlorococcales; Oocystaceae.
REFERENCE 1 (bases 1 to 1387)
AUTHORS Yamada,T. and Shimaji,M.
TITLE Splitting of the ribosomal RNA operon on chloroplast DNA from
Chlorella ellipsoidea
JOURNAL Mol. Gen. Genet. 208, 377-383 (1987)
STANDARD full automatic
COMMENT *source: strain=C87;
Data kindly reviewed (29-Apr-88) by Yamada T.
From EMBL 26 entry CHCERR23; dated 18-MAR-1991.
FEATURES Location/Qualifiers
tRNA <1..63
/note="tRNA-Ser"
misc_feature 70..74
/note="sigma-element"
misc_feature 365..810
/note="pot. transposon-like seq."
repeat_region 365..375
/note="direct repeat 1"
misc_feature 368..381
/note="alpha-element"
repeat_unit 381..396
/note="inverted repeat A"
repeat_unit 400..415
/note="inverted repeat A'"
promoter 634..639
/note="-35 region"
promoter 658..663
/note="-10 region"
precursor_RNA 668..>1387
/note="primary transcript"
RBS 668..672
/note="Shine Dalgarno sequence"
repeat_unit 763..777
/note="inverted repeat B"
repeat_unit 784..798
/note="inverted repeat B'"
repeat_region 799..810
/note="direct repeat 1"
tRNA 1054..1126
/note="tRNA-Ala"
rRNA 1261..>1387
/note="23 S rRNA"
BASE COUNT 440 a 260 c 272 g 415 t
ORIGIN
1 gagctcgatt gctaatcgag tatacagctc cctgtaccga gggttcgaat ccctctcact
61 ccgtacttgt aacccgggag cctaagtata aatcacactc tccattgttt gaatacaaag
121 tattcaaaat gtgaaaatat ttatacaaag ttgtgtgctt cgccctttgt accaaagggt
181 aaagacacaa agcctaggtt cctaactatt gttgccaagg gtatacgaac aaagttcgtc
241 aaccttacta ccaacgcaga agactttttt tctgcgctgc gctacgttgg agtttaggca
301 acaatataaa gttttaacaa gctacgagcc cccttgccat tgctttctaa gttttgcaaa
361 gcacaaactt agaaaacttg gtataaataa aaacactttg tgtttttatt tatacttagc
421 aagggcaatg gggactacgg gttagcaagc ttcgcttgct caccaagggg tatgcgagtt
481 agtaatttat ttataaatta cttactcgcc aaccttacta ccaacaaagt tggtagttta
541 ggcaaccaat actccaaggt taccaaacga agtttggtaa ccaaggtctt ccacgaagtt
601 aaacaaagta gaattagaga gaggcggact ggattgacgt aaataagctc tgtaggatat
661 tcttgaagga agataaaaag tttaaaataa tttgaaaccc ggggtcgaga gaagacttcc
721 ctaaaacttt gttcctagcg aatcttgttc aagttttcct aagtacaaat aaaaaacgtt
781 tttgtttttt atttatacaa acttaggaaa gcctaaatat tttgcgtaag cagaaaaatt
841 ggcttcgttt gtaatttaga aatcctttaa agctttgccc attgctttac aaacgtagtt
901 tgtaaaactt cattataaac gcagtttata atttaggttt atgcattcgc ataaacttta
961 agactattcc aaagttacta aacgtagttt agtcaccaag gttttacaag cgtagcttgt
1021 aaaacgtcct acggacaaat tctaattaag caagggagta tagctcagtt ggtagagcgc
1081 tgcctttgca aggcagatgt cagcggttcg agtccgctta cttccaccag cttcttaatt
1141 attagctggt tttctaacta aatgttatta ttacctaagc ttaaaagctt tgcttttaaa
1201 ttgaaggctt ttcaagcgta gcttgaaaac tcttaacaag ctttgcttgt tttggtagag
1261 atcaaatgaa gaaaacgtta cggtggatac ctaggcatct agagacgatg aagggcgtgg
1321 aaaccaacga aatgcttcga ggagctggaa acaagctatg attcggagat tcccgaatag
1381 ggcaacc
//