GenBank-Updates@genbank.bio.net (05/22/91)
LOCUS ATH3RRNA 4310 bp ds-DNA PLN 22-MAY-1991
DEFINITION Arabidopsis thaliana genes for 5.8S rRNA and 25S rRNA with 18S rRNA
fragment
ACCESSION X52320
KEYWORDS 25S ribosomal RNA; 5.8S ribosomal RNA; ribosomal RNA.
SOURCE Arabidopsis thaliana DNA.
ORGANISM Arabidopsis thaliana
Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida;
Dilleniidae; Capparales; Brassicaceae.
REFERENCE 1 (bases 1 to 4310)
AUTHORS Unfried,I.
JOURNAL Unpublished (1990)
STANDARD full automatic
REFERENCE 2 (bases 1 to 4310)
AUTHORS Unfried,I. and Gruendler,P.
TITLE Nucleotide sequence of the 5.8S and 25S rRNA genes and of the
internal transcribed spacers from Arabidopsis thaliana
JOURNAL Nucleic Acids Res. 18, 4011-4011 (1990)
STANDARD full automatic
COMMENT *source: strain=Co10; developmental stage=6-8 week old plants;
*source: tissue type=leaf; library=EMBL3; clone=ATR3; Bases 1-239
[1] overlap with X16077 (ATRRN18) 1664-1902. Bases 3738-4310 [1]
overlap with X15550 (ATRDNAI) 1-573.
Data kindly reviewed (20-JUL-1990) by Unfried I.
From EMBL 26 entry AT3RRNA; dated 18-MAR-1991.
FEATURES Location/Qualifiers
rRNA <1..228
/note="18S rRNA 3' region"
misc_feature 229..496
/note="ITS1 (intrageneic spacer)"
rRNA 497..660
/note="5.8S rRNA"
misc_feature 661..847
/note="ITS2 (intragenic spacer)"
rRNA 848..4222
/note="25S rRNA"
misc_feature 4223..4310
/note="IGR 5' region"
BASE COUNT 1020 a 1088 c 1296 g 906 t
ORIGIN
1 gaattcctag taagcgcgag tcatcagctc gcgttgacta cgtccctgcc ctttgtacac
61 accgcccgtc gctcctaccg attgaatgat ccggtgaagt gttcggatcg cggcgacgtg
121 ggtggttcgc cgcccgcgac gtcgcgagaa gtccactaaa ccttatcatt tagaggaagg
181 agaagtcgta acaaggtttc cgtaggtgaa cctgcggaag gatcattgtc gatacctgtc
241 caaaacagaa cgacccgcga accaaagatc accactctcg gtgggccggt ttcttagccg
301 attccttgcc cgccggatcc gtggtttcgc gtatcggcat gatcgggagc ttttatctcg
361 gtcttgtcgt gcgcgttgct tccggatatc acaaaacccc ggcacgaaaa gtgtcaagga
421 acatgcaaac gaacggctgg cattcgcctc cccggagacg gagtgtgggc ggatgctgtg
481 ctgcgaactg aagtctaaaa cgactctcgg caacggatat ctcggctctc gcatcgatga
541 agaacgtagc gaaatgcgat acttggtgtg aattgcagaa tcccgtgaac catcgagtct
601 ttgaacgcaa gttgcgcccc aagccttctg gccgagggca cgtctgcctg ggtgtcacaa
661 atcgtcgtcc ctcaccatcc tttgctgatg cgggacggaa gctggtctcc cgtgtgttac
721 cgcacgcgtt ggcctaaatc cgagccaagg acgcctggag cgtaccgaca tgcggtggtg
781 aacttgatcc attacatttt atcggtcgct cttgtccgga agctgtagat gacccaaagt
841 ccatatagcg accccaggtc aggcgggatt acccgctgag tttaagcata tcaataagcg
901 gaggaaaaga aactaacaag gattccctta gtaacggcga gcgaaccggg aagagcccag
961 cttgaaaatc ggacgtcttc ggcgttcgaa ttgtagtctg gagaagcgtc ctcagcgacg
1021 gaccgggcct aagttccctg gaaaggggcg ccagagaggg tgagagcccg tcgtgcccgg
1081 accctgtcgc accacgaggc gctgtctacg agtcgggttg tttgggaatg cagccccaat
1141 cgggcggtaa attccgtcca aggctaaata cgggcgagag accgatagcg aacaagtacc
1201 gcgaggtaaa gatgaaaagg actttgaaaa gagagtcaaa gagtgcttga aattgtcggg
1261 agggaagcgg atgggggccg gcgatgcgtc ctggtcggat gcggaacgga gcaatccggt
1321 ccgccgatcg attcggggcg tggaccgacg cggattacgg tggcggccta agcccgggct
1381 tttgatacgc ttgtggagac gtcgctgccg tgatcgtggt ctgcagcacg cgcctaacgg
1441 cgtgcctcgg catcagcgtg ctccgggcgt cggcctgtgg gctccccatt cgacccgtct
1501 tgaaacacgg accaaggagt ctgacatgtg tgcgagtcaa cgggtgagta aacccgtaag
1561 gcgcaaggaa gctgattggc gggatcctcg cgggtgcacc gccgaccgac cttgatcttc
1621 tgagaagggt tcgagtgtga gcatgcctgt cgggacccga aagatggtga actatgcctg
1681 agcggggtaa agccagagga aactctggtg gaagcccgca gcgatactga cgtgcaaatc
1741 gttcgtctga cttgggtata ggggcgaaag actaatcgaa ccatctagta gctggttccc
1801 tccgaagttt ccctcaggat agctggagct cggacgcgag ttctatcggg taaagccaat
1861 gattagaggc attgggggcg caacgcctcg acctattctc aaactttaaa taggtaggac
1921 gtgtcggctg ctttgttgag ccgtcacacg gaatcgagag ctccaagtgg gccatttttg
1981 gtaagcagaa ctggcgatgc gggatgaacc ggaagccggg ttacggtgcc caactgcgcg
2041 ctaacctaga acccacaaag ggtgttggtc gattaagaca gcaggacggt ggtcatggaa
2101 gtcgaaatcc gctaaggagt gtgtaacaac tcacctgccg aatcaactag ccccgaaaat
2161 ggatggcgct taagcgcgac ctatacccgg ccgtcggggc aagagccagg cctcgatgag
2221 taggagggcg cggcggtcgc tgcaaaacct agggcgcgag gcgcggagcg gccgtcggtg
2281 cagatcttgg tggtagtagc aaatattcaa atgagaactt tgaaggccga agaggggaaa
2341 ggttccatgt gaacggcact tgcacatggg ttagtcgatc ctaagagtcg ggggaaaccc
2401 gtctgatagc gcttaagcga acttcgaaag gggatccggt taaaattccg gaaccgggac
2461 gtggcggttg acggcaacgt tagggagtcc ggagacgtcg gcgggggcct cgggaagagt
2521 tatcttttct gtttaacagc ctgcccaccc tggaaacggc tcagccggag gtagggtcca
2581 gcggctggaa gagcaccgca cgtcgcgtgg tgtccggtgc gcccccgggc gcccttgaaa
2641 atccggagga ccgagtgccg ctcacgcccg gtcgtactca taaccgcatc aggtctccaa
2701 ggtgaacagc ctctggtcga tggaacaatg taggcaaggg aagtcggcaa aatggatccg
2761 taacttcggg aaaaggattg gctctgaggg ctgggctcgg gggtcccagt tccgaacccg
2821 tcggctgtca gcggactgct cgagctgctt ccgcggcgag agcgggtcgc cggctgccgg
2881 ccgggggacg actgggaacg gctctctcgg gagctttccc cgggcgtcga acagtcagct
2941 cagaactggt acggacaagg ggaatccgac tgtttaatta aaacaaagca ttgcgatggt
3001 ccctgcggat gctaacgcaa tgtgatttct gcccagtgct ctgaatgtca aagtgaagaa
3061 attcaaccaa gcgcgggtaa acggcgggag taactatgac tctcttaagg tagccaaatg
3121 cctcgtcatc taattagtga cgcgcatgaa tggattaacg agattcccac tgtccctgtc
3181 tactatccag cgaaaccaca gccaagggaa cgggcttggc agaatcagcg gggaaagaag
3241 accctgttga gcttgactct agtccgactt tgtgaaatga cttgagaggt gtaggataag
3301 tgggagcttc ggcgcaagtg aaataccact acttttaacg ttattttact tactccgtga
3361 atcggaggcc ggggtacaac ccctgttttt ggtcccaagg ctcgcttcgg cgggtcgatc
3421 cgggcggagg acattgtcag gtggggagtt tggctggggc ggcacatctg ttaaaagata
3481 acgcaggtgt cctaagatga gctcaacgag aacagaaatc tcgtgtggaa caaaagggta
3541 aaagctcgtt tgattctgat tttcagtacg aatacgaacc gtgaaagcgt ggcctatcga
3601 tcctttagac ttcggaattt gaagctagag gtgtcagaaa agttaccaca gggataactg
3661 gcttgtggca gccaagcgtt catagcgacg ttgctttttg atccttcgat gtcggctctt
3721 cctatcattg tgaagcagaa ttcaccaagt gttggattgt tcacccacca atagggaacg
3781 tgagctgggt ttagaccgtc gtgagacagg ttagttttac cctactgatg cccgcgtcgc
3841 gatagtaatt caacctagta cgagaggaac cgttgattcg cacaattggt catcgcgctt
3901 ggttgaaaag ccagtggcgc gaagctaccg tgcgctggat tatgactgaa cgcctctaag
3961 tcagaatccg ggctagaagc gacgcatgcg cccgccgccc gattgccgac cctcagtagg
4021 agcttaggct ccaaaggcac gtgtcgttgg ctaagtccgt tcggcggaac ggtcgttcgg
4081 accgccttga attataatta ccaccgagcg gcgggtagaa tcctttgcag acgacttaaa
4141 tacgcgacgg ggtattgtaa gtggcagagt ggccttgctg ccacgatcca ctgagattca
4201 gccctttgtc gctaagattc gaccctcccc taaatcactc caaaaaaaac aatccccaat
4261 tctacacaag tgtttctaca ctaacaaagc aacagctcct taacgaattc
//