GenBank-Updates@genbank.bio.net (05/22/91)
LOCUS ECOLSPDAP 2696 bp ds-DNA BCT 22-MAY-1991
DEFINITION E. coli lsp-dapB interval.
ACCESSION X54945
KEYWORDS dapB gene; lsp gene.
SOURCE Escherichia coli DNA.
ORGANISM Escherichia coli
Prokaryota; Bacteria; Gracilicutes; Scotobacteria;
Facultatively anaerobic rods; Enterobacteriaceae.
REFERENCE 1 (bases 1 to 2696)
AUTHORS Stragier,P.
JOURNAL Unpublished (1990)
STANDARD full automatic
REFERENCE 2 (sites)
AUTHORS Bouvier,J. and Stragier,P.
TITLE Nucleotide sequence of the lsp-dapB interval in Escherichia coli
JOURNAL Nucleic Acids Res. 19, 180-180 (1991)
STANDARD full staff_review
COMMENT *source: strain=K12; **map: map position=0.6; See also <K01990> and
<M10661>.
From EMBL 26 entry ECLSPDAP; dated 18-MAR-1991.
FEATURES Location/Qualifiers
mRNA <1..>21
/gene="lsp"
mat_peptide <1..18
/codon_start=1
/gene="lsp"
mRNA <1613..>2527
/gene="ORF 3"
mRNA <2663..>2696
/gene="dapB"
CDS <1..21
/codon_start=1
/gene="lsp"
/codon_start=1
misc_feature 30..61
/note="REP sequence 1"
misc_feature 86..115
/note="REP sequence 2"
mat_peptide 146..592
/gene="ORF 1"
CDS 146..595
/gene="ORF 1"
/codon_start=146
mat_peptide 597..1544
/gene="ORF 2"
CDS 597..1547
/gene="ORF 2"
/codon_start=597
terminator 1572..1601
mat_peptide 1613..2524
/note="product appears to be membrane bound"
/gene="ORF 3"
CDS 1613..2527
/note="product appears to be membrane bound"
/gene="ORF 3"
/codon_start=1613
mat_peptide 2694..>2696
/gene="dapB"
CDS 2694..>2696
/gene="dapB"
/codon_start=2694
BASE COUNT 608 a 695 c 757 g 636 t
ORIGIN
1 tctagagcga aaaaacaata ataaaccctg ccggatgcga tgctgacgca tcttatccgg
61 cctacagatt gctgcgaaat cgtaggccgg ataaggcgtt tacgccgcat ccggcaaaaa
121 tccttaaata taagagcaaa cctgcatgtc tgaatctgta cagagcaata gcgccgtcct
181 ggtgcacttc acgctaaaac tcgacgatgg caccaccgcc gagtctaccc gcaacaacgg
241 taaaccggcg ctgttccgcc tgggtgatgc ttctctttct gaagggctgg agcaacacct
301 gttggggctg aaagtgggcg ataaaaccac cttctcgttg gagccagatg cggcgtttgg
361 cgtgccgtca ccggacctga ttcagtactt ctcccgccgt gaatttatgg atgcaggcga
421 gccagaaatt ggcgcaatca tgctttttac cgcaatggat ggcagtgaga tgcctggcgt
481 gatccgcgaa attaacggcg actccattac cgttgatttc aaccatccgc tggccgggca
541 gaccgttcat tttgatattg aagtgctgga aatcgatccg gcactggagg cgtaacatgc
601 agatcctgtt ggccaacccg cgtggttttt gtgccggggt agaccgcgct atcagcattg
661 ttgaaaacgc gctggccatt tacggcgcac cgatatatgt ccgtcacgaa gtggtacata
721 accgctatgt ggtcgatagc ttgcgtgagc gtggggctat ctttattgag cagattagcg
781 aagtaccgga cggcgcgatc ctgattttct ccgcacacgg tgtttctcag gcggtacgta
841 acgaagcaaa aagtcgcgat ttgacggtgt ttgatgccac ctgtccgctg gtgaccaaag
901 tgcatatgga agtcgcccgc gccagtcgcc gtggcgaaga atctattctc atcggtcacg
961 ccgggcaccc ggaagtggaa gggacaatgg gccagtacag taacccggaa gggggaatgt
1021 atctggtcga atcgccggac gatgtgtgga aactgacggt caaaaacgaa gagaagctct
1081 cctttatgac ccagaccacg ctgtcggtgg atgacacgtc tgatgtgatc gacgcgctgc
1141 gtaaacgctt cccgaaaatt gtcggtccgc gcaaagatga catctgctac gccacgacta
1201 accgtcagga agcggtacgc gccctggcag aacaggcgga agttgtgttg gtggtcggtt
1261 cgaaaaactc ctccaactcc aaccgtctgg cggagctggc ccagcgtatg ggcaaacgcg
1321 cgtttttgat tgacgatgcg aaagacatcc aggaagagtg ggtgaaagag gttaaatgcg
1381 tcggcgtgac tgcgggcgca tcggctccgg atattctggt gcagaatgtg gtggcacgtt
1441 tgcagcagct gggcggtggt gaagccattc cgctggaagg ccgtgaagaa aacattgttt
1501 tcgaagtgcc gaaagagctg cgtgtcgata ttcgtgaagt cgattaagtc attagcagcc
1561 taagttatgc gaaaatgccg gtcttgttac cggcattttt tatggagaaa acatgcgttt
1621 acctatcttc ctcgatactg accccggcat tgacgatgcc gtcgccattg ccgccgcgat
1681 ttttgcaccc gaactcgacc tgcaactgat gaccaccgtc gcgggtaatg tctcggttga
1741 gaaaactacc cgcaatgccc tgcaactgct gcatttctgg aatgcggaga ttccgctcgc
1801 ccaaggggcc gctgtgccac tggtacgcgc accgcgtgat gcggcatctg tgcacggcga
1861 atcgggaatg gctggctacg actttgttga gcacaaccga aagccgctcg ggataccggc
1921 gtttctggcg attcgggatg ccctgatgcg tgcaccagag cctgttaccc tggtggccat
1981 cggcccgtta accaatattg cgctgttact ttcacaatgc ccggaatgca agccgtatat
2041 tcgccgtctg gtgatcatgg gtggttctgc cggacgcggc aactgtacgc caaacgccga
2101 gtttaatatt gctgccgatc cagaagctgc tgcctgtgtc ttccgcagtg gtattgaaat
2161 cgtcatgtgc ggtttggatg tcaccaatca ggcaatatta actcctgact atctctctac
2221 actgccgcag ttaaaccgta ccgggaaaat gcttcacgcc ctgtttagcc actaccgtag
2281 cggcagtatg caaagcggct tgcgaatgca cgatctctgc gccatcgcct ggctggtgcg
2341 cccggacctg ttcactctca aaccctgttt tgtggcagtg gaaactcagg gcgaatttac
2401 ctcaggcacg acggtggttg atatcgacgg ttgcctgggc aagccagcca atgtacaggt
2461 ggcattggat ctggatgtga aaggcttcca gcagtgggtg gctgaggtgc tggctctggc
2521 gtcgtaacct gtcacatgtt attggcatgc agtcattcat cgactcatgc ctttcactga
2581 tatccctccc tgtttatcat taatttctaa ttatcagcgt ttttggctgg cggcgtagcg
2641 atgcgctggt tactctgaaa acggtctatg caaattaaca aaagagaata gctatg
//