GenBank-Updates@genbank.bio.net (05/22/91)
LOCUS CRETOC1 5662 bp ds-DNA PLN 22-MAY-1991
DEFINITION C. reinhardtii transposon
ACCESSION X56231
KEYWORDS Transposon.
SOURCE Chlamydomonas reinhardtii DNA.
ORGANISM Chlamydomonas reinhardtii
Eukaryota; Plantae; Thallobionta; Chlorophycota; Chlorophyceae;
Volvocales; Chlamydomonadaceae.
REFERENCE 1 (bases 1 to 5662)
AUTHORS Day,A.
JOURNAL Unpublished (1990)
STANDARD full automatic
REFERENCE 2 (bases 1 to 5662)
AUTHORS Day,A. and Rochaix,J.D.
TITLE A transposon with an unusual LTR arrangement from Chlamydomonas
reinhardtii contains an internal tandem array of 76 bp repeats
JOURNAL Nucleic Acids Res. 19, 1259-1266 (1991)
STANDARD full automatic
COMMENT See also X12503.
From EMBL 26 entry CRTOC1; dated 25-MAR-1991.
FEATURES Location/Qualifiers
repeat_unit 1..217
/rpt_type=terminal
mRNA 165..5648
/evidence=EXPERIMENTAL
repeat_region 813..1705
/rpt_type=tandem
CDS 1418..1708
/note="no ATG start codon"
/codon_start=1418
CDS 1699..2241
/note="no ATG start codon"
/codon_start=1699
CDS 2242..2523
/note="no ATG start codon"
/codon_start=2242
CDS 2762..3235
/note="no ATG start codon"
/codon_start=2762
CDS 2827..2970
/note="no ATG start codon"
/codon_start=2827
CDS 3003..3530
/note="no ATG start codon"
/codon_start=3003
CDS 3613..3960
/note="no ATG start codon"
/codon_start=3613
CDS 3936..4349
/note="no ATG start codon"
/codon_start=3936
repeat_unit 4849..5085
/rpt_type=terminal
repeat_unit 5086..5302
/rpt_type=terminal
misc_feature 5303..5425
/note="unique region"
CDS 5339..5596
/note="no ATG start codon"
/codon_start=5339
repeat_region 5426..5662
polyA_signal 5631..5635
BASE COUNT 1015 a 1685 c 1655 g 1307 t
ORIGIN
1 gcgctgactt atcgcagcgc agtggagata agtctagtta ttgcgacgta actgccgtgt
61 tgcgttagag tcacgcacgg cgcaggacgc tcgggtacgt gcctgtgcat ggggccgaac
121 cgagctgggt cttgtacgcg tcaggagcac acggcgcctt atctgccgtt gtgcttctgt
181 actgtatttc ggatcgtccc tctgccggga cggtgacctc agtgtgtcgc acttaaacgt
241 tccctacatt tctggacttt ctttgcaatc ctatacctgg ttctaactat acttgaccat
301 gtatggaccg aataagcgtt taatatatac tcagacggag ttgcagcgtt ttgttgcgcg
361 atcctgctca atggaacccc ttagcttgat cacgctcgct ctctgatcgt aagggaatgc
421 ccttcgaagc ttctctggcg ctttgaacca cgctttggtt cgggggccgc attcgggagc
481 aaatcggagc agagcggagc tttcaagcgg agcaaaggcg cgcgaagcgt tgcggacaag
541 gcgttcggca agtcactgaa agcaaaaggg catgcacagc tgtgcgggcg ggctacttgc
601 ttgccatgcg cggtcctgct tgccgtgcct tcgtgtctac ccgtcgcttt acagttcaca
661 gctttgtgca atacctttcc acatcttcca ttgtgccacc cccacctccc caagaccctc
721 aggacttttg gcgcggtact tctcctgtct gcctatccag gccgcagggc ccgcgtgccc
781 ttggggaagg ggcgtgtgtg ccgttgggat ccggcctgtg cgccgcaagc aacgggcttt
841 gcgcccttgc cttatggaca atggacggca tacgtgccct tatgatacgg cctgtgtgcc
901 gcaagcaatg ggctccgcgc ccttgcttta tggacaatgg acggcatacg tgcccttatg
961 atacggcctg tgcgccgcaa gcaacgggct ccgcgccctt gctttatgga caatggacgg
1021 catacgtgcc cttatgatac ggcctgtgtg ccgcaagcaa cgggctccgc gcccttgctt
1081 tatggacaat ggacggcata cgtgccccta tgatacggcc tgtgcgccgc tagcaacggg
1141 ctccgcgccc ttgctttatg gacaatggac ggcatacgtg cccttatgat acggcctgtg
1201 cgccgcaagc aatgggctcc gtgcccttgc tttatggaca atggacggca tacgtgcccc
1261 tatgatacgg cctgtgcgcc gcaagcaacg ggctccgcgc cctggcttca tggacaattt
1321 acggcgtacg tgccctcatg atacagcctg tgcgccgcag gcaacgggct ccgcgccctt
1381 gctccatgga cacttcacgg cgtacgtgcc ctcatgatac ggcctgtgtg ccgcaggcaa
1441 cgggctccgc gcccttgctt catggacaat gcgccgcgta cgtgttctta tgatacggcc
1501 tgtgcgccgc aagcaacggg ctccgcaccc ttgttttatg gacaattcac ggcatacgtg
1561 cccgtatgat gtgacctgtg tgccgcaagc aacggcttcg cacccttgct tttgggtaat
1621 agatggcata cgtgccctta tgatacgacc tgtgtgccgc aagcaacggg ctccacactc
1681 ttgcgttgtg gattatagac ggcattgaaa tgcttacgtg ccttcgttgt acatgccttt
1741 gcgttgtgga caatgtgtgg tctgagcgcc acgttcggat acggcgtgtg tgccgccagc
1801 aacaggcttt gcgcctcgca tcatgtgtct tgcgatatgg cctgtgtgcc gcatgcaatt
1861 atgctgcctg ccctgtcgtt atggacgctt cgacttgttg cgtgccctgc tgcgtgccct
1921 gtcgcaatac gccttgagtg taccgtgcac ggcaagcctg cgcctcgcta ttgcttcgtg
1981 ttgacaacgg agcgggctta cgtgatcatg cgtcaccctg tacgtcttga ggtccgcacg
2041 cacatcatac tatcacgcgg caccaccctt gtagtttggc tgacgcaccc caagccaacc
2101 tatatgcatt cgatgtgtgc actaggccca agtgccgaat ttgtttttcc ggatatttcg
2161 ccctcagtga gcgatgtgga gttttgtgca gttcggccag catgctatgc ccagccaata
2221 acaataccgc atgacgcata actataccgc atgacgcata aacatgcctt cgtgccctgc
2281 accaggcatc ggacgctgtg tcacgcagtg agcccgaccc tgcgcaacca acattttgtt
2341 gcgagatacg gtcggagctg ggattacagc ctgcctggtg ggtttggatg gcgcccgtgt
2401 gttgggctgg gctgttgctg ctcgcggtgg ggcccaccac caagtcacgg cacccatccg
2461 ccctcccctc ttgttggccc acccgcctgt acacatgcca gtcacccgct cgccatcctg
2521 tgaaagcggg tagccgactt ggcaagcgct tttcctgaca cttggcgcag gtttgagtgg
2581 gataccagaa tggtctgaat gtagttgttg gataaccagt acactgcggt gtgtagctgg
2641 ttagcgggag tgccgtgcat gaaacacgct actcgacccg ccatgcccgc gcgatggtac
2701 caccaaccgt tcaacccaga tccatgccgg ggtagcatcg accccacagt cagactgata
2761 gctcctatcc aggtgtcagg cgccatgtat gtatctgtgg acgcgtcaag ctggcttgtg
2821 ccgtagcgtt ggccgcctgt atggcacggc atctgtgtca cgttatggcc tcatgcttac
2881 cgtagtcacg cggcttgcgt gctgtgcggc acgctccctg ccaatccttc aggacatgta
2941 tgcatacatg ttacttcgtc agagccatag caggggcagc gtgttctgtc aatgcctcat
3001 gaacccagag acccaagcca acgtacgcat tagttccgca acgcacgtca atgccaactg
3061 tatgtgtcgc ctgcccactc gcgagtggac gcctagggaa ccaaccttgg ttcctttcag
3121 ccccggcctt acttcacccg gcggggcaat tacttatcac cgaagtgcta ggagcagtgt
3181 gctatatgtc attactatta agagcgtatg gcgacacagg ctcacatgtg ggtagccagg
3241 cttggcaggc atcccaactc agcccggcct cctcacagca gtaccacgac gtgcccgtac
3301 gtggtcgagt gcggagtttg gctgccggcg tggctgtatc atctctcaca ttggatgacc
3361 catccgccac tgctgttcac tactggcacg tccctcgagt cgctcaccca ccggctccgc
3421 ccagcgttcg ctccctttgg ctgggccggg gcccgtggcg catccaaccc gccatcgcgg
3481 ccccgagtgc tccttatttc ctcccatcac tacgccttct atcactatag atacattgcg
3541 cgttccacgc gtgccgggta tccttcaccc ctccgcgccg ctcgaccagg ccagccttgc
3601 tggggttgct gaggtgttac ccttcatgtt gccctccctg ctattacggt acaccccaca
3661 gctgccgtgg cgtccggtat cggcacgtac gggacattgt gtgcatgcat ccccgcggcg
3721 tttggaggca aacattcacg tgcgcgcctg tcctgcgtcc gccggggtga tgctatctat
3781 gggtgtacct actgcttgat tggtagtgac tcttatgcaa gacactgcaa atctcaagca
3841 tggcacctag ctagcaagaa agaaattagt gttcgtggcc atgctgcacg gctgggcatg
3901 gctgcccgca tcctacacca cgacggcgcg ggtgaacgaa gggcaggttg ccgcgcgtga
3961 ctcgcgtacg taaaaccgct ctagtgttgc aactcgcgcc ttctcctgcg tggcgcatgt
4021 tggctagcct gtcccagctt cgagtcacga cgttgttatt attcccaagg ttgttccgag
4081 cagcctacaa cgtcaacacg tgttatggca tggccctggg ggccggtaga gagtaccgag
4141 gtctccagtg gttcgtgcca acacgtgcca acacgcactg ttacctttcc tgggcacacg
4201 gacggccaca gctgcccaca agccacacac ctgaacaagg atgcatgtgt ttccctgtaa
4261 cgccccggcg tcgtctgcat ggctggcgca cgcgggataa cgcatgtgtg tttctgtcgt
4321 ggccattggt gcacctgata cgtttgtgag tctggtatca tggcccttgc aaagccagtc
4381 gtgttcctat tgctgcttgt cttctggtag tgaccattgg ccgcccatga ccgacggagt
4441 gtggcgctgt caggccccgc gttggcgtcg ccctgcgcct gcagcaggtg ccggcggcgc
4501 ctccggcggc gctcatcccc gcgtgatggt gctgctcgtg cagccaatat ccccaagcac
4561 gaagctcgtt ctattgaccg ctgttgagtg tgcaactagg accgtacgtt cgtgcgcaag
4621 ctaggcgatg ggcggagcgc tccgcggtgt tcgagacaca tgatttcggt agcgcaaggg
4681 cacgaacgcc accgccatca ccgccgaccg caccttggtt tgcatgaccg gccgttgggc
4741 caagcgcttt gcgagaagag ctgcatacgc gaagccaatc aagcccagcc actagggctg
4801 ccgtcgcccg caccatgacc tcccggcgtt gaggactact accaaactct ggcagcactt
4861 tcggccacta gtgcaacctc aacacgggcg ggctggggcg ggcacggcgg acttggtggg
4921 gttatcggga gctgcgaggc cggaggtagg aggccgctga gggccacgaa tgagttgcta
4981 ggccgcttga ggcatgagtg gaggctattg tcggtttgag agattgggat tgtcgtttgg
5041 ggccgtggcg gtttgtaacg ctacacggca gtaaggagtc aataagcgct gacttatcgc
5101 agcgcagtgg agataagtct agttattgcg acgtaactgc cgtgttgcgt tagagtcacg
5161 cacggcgcag gacgctcggg tacgtgcctg tgcatggggc cgaaccgagc tgggtcttgt
5221 acgcgtcagg agcacacggc gccttatctg ccgttgtgct tctgtactgt atttcggatc
5281 gtccctctgc cgggacggtg acaacccacc cgccccccct ggtgccgccg cggattaatg
5341 tggtggcacc cgtgggcgct gcggcgtgcg tggttgtctg gactctgctg ctatcaggca
5401 cttcatacat gcgacacacc cagtactggc agcactttcg gccactagtg caacctcaac
5461 acgggcgggc tggggcgggc acggcggact tggtggggtt atcgggagct gcgaggccgg
5521 aggtaggagg ccgctgaggg ccacgaatga gttgctaggc cgcttgaggc atgagtggag
5581 gctattgtcg gtttgagaga ttgggattgt cgtttggggc cgtggcggtt tgtaacgcta
5641 cacggcagta aggagtcaat aa
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