GenBank-Updates@genbank.bio.net (05/22/91)
LOCUS CRETOC1 5662 bp ds-DNA PLN 22-MAY-1991 DEFINITION C. reinhardtii transposon ACCESSION X56231 KEYWORDS Transposon. SOURCE Chlamydomonas reinhardtii DNA. ORGANISM Chlamydomonas reinhardtii Eukaryota; Plantae; Thallobionta; Chlorophycota; Chlorophyceae; Volvocales; Chlamydomonadaceae. REFERENCE 1 (bases 1 to 5662) AUTHORS Day,A. JOURNAL Unpublished (1990) STANDARD full automatic REFERENCE 2 (bases 1 to 5662) AUTHORS Day,A. and Rochaix,J.D. TITLE A transposon with an unusual LTR arrangement from Chlamydomonas reinhardtii contains an internal tandem array of 76 bp repeats JOURNAL Nucleic Acids Res. 19, 1259-1266 (1991) STANDARD full automatic COMMENT See also X12503. From EMBL 26 entry CRTOC1; dated 25-MAR-1991. FEATURES Location/Qualifiers repeat_unit 1..217 /rpt_type=terminal mRNA 165..5648 /evidence=EXPERIMENTAL repeat_region 813..1705 /rpt_type=tandem CDS 1418..1708 /note="no ATG start codon" /codon_start=1418 CDS 1699..2241 /note="no ATG start codon" /codon_start=1699 CDS 2242..2523 /note="no ATG start codon" /codon_start=2242 CDS 2762..3235 /note="no ATG start codon" /codon_start=2762 CDS 2827..2970 /note="no ATG start codon" /codon_start=2827 CDS 3003..3530 /note="no ATG start codon" /codon_start=3003 CDS 3613..3960 /note="no ATG start codon" /codon_start=3613 CDS 3936..4349 /note="no ATG start codon" /codon_start=3936 repeat_unit 4849..5085 /rpt_type=terminal repeat_unit 5086..5302 /rpt_type=terminal misc_feature 5303..5425 /note="unique region" CDS 5339..5596 /note="no ATG start codon" /codon_start=5339 repeat_region 5426..5662 polyA_signal 5631..5635 BASE COUNT 1015 a 1685 c 1655 g 1307 t ORIGIN 1 gcgctgactt atcgcagcgc agtggagata agtctagtta ttgcgacgta actgccgtgt 61 tgcgttagag tcacgcacgg cgcaggacgc tcgggtacgt gcctgtgcat ggggccgaac 121 cgagctgggt cttgtacgcg tcaggagcac acggcgcctt atctgccgtt gtgcttctgt 181 actgtatttc ggatcgtccc tctgccggga cggtgacctc agtgtgtcgc acttaaacgt 241 tccctacatt tctggacttt ctttgcaatc ctatacctgg ttctaactat acttgaccat 301 gtatggaccg aataagcgtt taatatatac tcagacggag ttgcagcgtt ttgttgcgcg 361 atcctgctca atggaacccc ttagcttgat cacgctcgct ctctgatcgt aagggaatgc 421 ccttcgaagc ttctctggcg ctttgaacca cgctttggtt cgggggccgc attcgggagc 481 aaatcggagc agagcggagc tttcaagcgg agcaaaggcg cgcgaagcgt tgcggacaag 541 gcgttcggca agtcactgaa agcaaaaggg catgcacagc tgtgcgggcg ggctacttgc 601 ttgccatgcg cggtcctgct tgccgtgcct tcgtgtctac ccgtcgcttt acagttcaca 661 gctttgtgca atacctttcc acatcttcca ttgtgccacc cccacctccc caagaccctc 721 aggacttttg gcgcggtact tctcctgtct gcctatccag gccgcagggc ccgcgtgccc 781 ttggggaagg ggcgtgtgtg ccgttgggat ccggcctgtg cgccgcaagc aacgggcttt 841 gcgcccttgc cttatggaca atggacggca tacgtgccct tatgatacgg cctgtgtgcc 901 gcaagcaatg ggctccgcgc ccttgcttta tggacaatgg acggcatacg tgcccttatg 961 atacggcctg tgcgccgcaa gcaacgggct ccgcgccctt gctttatgga caatggacgg 1021 catacgtgcc cttatgatac ggcctgtgtg ccgcaagcaa cgggctccgc gcccttgctt 1081 tatggacaat ggacggcata cgtgccccta tgatacggcc tgtgcgccgc tagcaacggg 1141 ctccgcgccc ttgctttatg gacaatggac ggcatacgtg cccttatgat acggcctgtg 1201 cgccgcaagc aatgggctcc gtgcccttgc tttatggaca atggacggca tacgtgcccc 1261 tatgatacgg cctgtgcgcc gcaagcaacg ggctccgcgc cctggcttca tggacaattt 1321 acggcgtacg tgccctcatg atacagcctg tgcgccgcag gcaacgggct ccgcgccctt 1381 gctccatgga cacttcacgg cgtacgtgcc ctcatgatac ggcctgtgtg ccgcaggcaa 1441 cgggctccgc gcccttgctt catggacaat gcgccgcgta cgtgttctta tgatacggcc 1501 tgtgcgccgc aagcaacggg ctccgcaccc ttgttttatg gacaattcac ggcatacgtg 1561 cccgtatgat gtgacctgtg tgccgcaagc aacggcttcg cacccttgct tttgggtaat 1621 agatggcata cgtgccctta tgatacgacc tgtgtgccgc aagcaacggg ctccacactc 1681 ttgcgttgtg gattatagac ggcattgaaa tgcttacgtg ccttcgttgt acatgccttt 1741 gcgttgtgga caatgtgtgg tctgagcgcc acgttcggat acggcgtgtg tgccgccagc 1801 aacaggcttt gcgcctcgca tcatgtgtct tgcgatatgg cctgtgtgcc gcatgcaatt 1861 atgctgcctg ccctgtcgtt atggacgctt cgacttgttg cgtgccctgc tgcgtgccct 1921 gtcgcaatac gccttgagtg taccgtgcac ggcaagcctg cgcctcgcta ttgcttcgtg 1981 ttgacaacgg agcgggctta cgtgatcatg cgtcaccctg tacgtcttga ggtccgcacg 2041 cacatcatac tatcacgcgg caccaccctt gtagtttggc tgacgcaccc caagccaacc 2101 tatatgcatt cgatgtgtgc actaggccca agtgccgaat ttgtttttcc ggatatttcg 2161 ccctcagtga gcgatgtgga gttttgtgca gttcggccag catgctatgc ccagccaata 2221 acaataccgc atgacgcata actataccgc atgacgcata aacatgcctt cgtgccctgc 2281 accaggcatc ggacgctgtg tcacgcagtg agcccgaccc tgcgcaacca acattttgtt 2341 gcgagatacg gtcggagctg ggattacagc ctgcctggtg ggtttggatg gcgcccgtgt 2401 gttgggctgg gctgttgctg ctcgcggtgg ggcccaccac caagtcacgg cacccatccg 2461 ccctcccctc ttgttggccc acccgcctgt acacatgcca gtcacccgct cgccatcctg 2521 tgaaagcggg tagccgactt ggcaagcgct tttcctgaca cttggcgcag gtttgagtgg 2581 gataccagaa tggtctgaat gtagttgttg gataaccagt acactgcggt gtgtagctgg 2641 ttagcgggag tgccgtgcat gaaacacgct actcgacccg ccatgcccgc gcgatggtac 2701 caccaaccgt tcaacccaga tccatgccgg ggtagcatcg accccacagt cagactgata 2761 gctcctatcc aggtgtcagg cgccatgtat gtatctgtgg acgcgtcaag ctggcttgtg 2821 ccgtagcgtt ggccgcctgt atggcacggc atctgtgtca cgttatggcc tcatgcttac 2881 cgtagtcacg cggcttgcgt gctgtgcggc acgctccctg ccaatccttc aggacatgta 2941 tgcatacatg ttacttcgtc agagccatag caggggcagc gtgttctgtc aatgcctcat 3001 gaacccagag acccaagcca acgtacgcat tagttccgca acgcacgtca atgccaactg 3061 tatgtgtcgc ctgcccactc gcgagtggac gcctagggaa ccaaccttgg ttcctttcag 3121 ccccggcctt acttcacccg gcggggcaat tacttatcac cgaagtgcta ggagcagtgt 3181 gctatatgtc attactatta agagcgtatg gcgacacagg ctcacatgtg ggtagccagg 3241 cttggcaggc atcccaactc agcccggcct cctcacagca gtaccacgac gtgcccgtac 3301 gtggtcgagt gcggagtttg gctgccggcg tggctgtatc atctctcaca ttggatgacc 3361 catccgccac tgctgttcac tactggcacg tccctcgagt cgctcaccca ccggctccgc 3421 ccagcgttcg ctccctttgg ctgggccggg gcccgtggcg catccaaccc gccatcgcgg 3481 ccccgagtgc tccttatttc ctcccatcac tacgccttct atcactatag atacattgcg 3541 cgttccacgc gtgccgggta tccttcaccc ctccgcgccg ctcgaccagg ccagccttgc 3601 tggggttgct gaggtgttac ccttcatgtt gccctccctg ctattacggt acaccccaca 3661 gctgccgtgg cgtccggtat cggcacgtac gggacattgt gtgcatgcat ccccgcggcg 3721 tttggaggca aacattcacg tgcgcgcctg tcctgcgtcc gccggggtga tgctatctat 3781 gggtgtacct actgcttgat tggtagtgac tcttatgcaa gacactgcaa atctcaagca 3841 tggcacctag ctagcaagaa agaaattagt gttcgtggcc atgctgcacg gctgggcatg 3901 gctgcccgca tcctacacca cgacggcgcg ggtgaacgaa gggcaggttg ccgcgcgtga 3961 ctcgcgtacg taaaaccgct ctagtgttgc aactcgcgcc ttctcctgcg tggcgcatgt 4021 tggctagcct gtcccagctt cgagtcacga cgttgttatt attcccaagg ttgttccgag 4081 cagcctacaa cgtcaacacg tgttatggca tggccctggg ggccggtaga gagtaccgag 4141 gtctccagtg gttcgtgcca acacgtgcca acacgcactg ttacctttcc tgggcacacg 4201 gacggccaca gctgcccaca agccacacac ctgaacaagg atgcatgtgt ttccctgtaa 4261 cgccccggcg tcgtctgcat ggctggcgca cgcgggataa cgcatgtgtg tttctgtcgt 4321 ggccattggt gcacctgata cgtttgtgag tctggtatca tggcccttgc aaagccagtc 4381 gtgttcctat tgctgcttgt cttctggtag tgaccattgg ccgcccatga ccgacggagt 4441 gtggcgctgt caggccccgc gttggcgtcg ccctgcgcct gcagcaggtg ccggcggcgc 4501 ctccggcggc gctcatcccc gcgtgatggt gctgctcgtg cagccaatat ccccaagcac 4561 gaagctcgtt ctattgaccg ctgttgagtg tgcaactagg accgtacgtt cgtgcgcaag 4621 ctaggcgatg ggcggagcgc tccgcggtgt tcgagacaca tgatttcggt agcgcaaggg 4681 cacgaacgcc accgccatca ccgccgaccg caccttggtt tgcatgaccg gccgttgggc 4741 caagcgcttt gcgagaagag ctgcatacgc gaagccaatc aagcccagcc actagggctg 4801 ccgtcgcccg caccatgacc tcccggcgtt gaggactact accaaactct ggcagcactt 4861 tcggccacta gtgcaacctc aacacgggcg ggctggggcg ggcacggcgg acttggtggg 4921 gttatcggga gctgcgaggc cggaggtagg aggccgctga gggccacgaa tgagttgcta 4981 ggccgcttga ggcatgagtg gaggctattg tcggtttgag agattgggat tgtcgtttgg 5041 ggccgtggcg gtttgtaacg ctacacggca gtaaggagtc aataagcgct gacttatcgc 5101 agcgcagtgg agataagtct agttattgcg acgtaactgc cgtgttgcgt tagagtcacg 5161 cacggcgcag gacgctcggg tacgtgcctg tgcatggggc cgaaccgagc tgggtcttgt 5221 acgcgtcagg agcacacggc gccttatctg ccgttgtgct tctgtactgt atttcggatc 5281 gtccctctgc cgggacggtg acaacccacc cgccccccct ggtgccgccg cggattaatg 5341 tggtggcacc cgtgggcgct gcggcgtgcg tggttgtctg gactctgctg ctatcaggca 5401 cttcatacat gcgacacacc cagtactggc agcactttcg gccactagtg caacctcaac 5461 acgggcgggc tggggcgggc acggcggact tggtggggtt atcgggagct gcgaggccgg 5521 aggtaggagg ccgctgaggg ccacgaatga gttgctaggc cgcttgaggc atgagtggag 5581 gctattgtcg gtttgagaga ttgggattgt cgtttggggc cgtggcggtt tgtaacgcta 5641 cacggcagta aggagtcaat aa //