GenBank-Updates@genbank.bio.net (05/25/91)
LOCUS BMOCHORIO 9454 bp ds-DNA INV 25-MAY-1991 DEFINITION Bombyx mori chorion locus sequence encompassing gene pairs A/B.L12 and A/B.L11, pseudogene PSI-A.L11 and retrotransposon BM-A.L11. ACCESSION X15557 KEYWORDS chorion protein; pseudogene; retrotransposon. SOURCE Bombyx mori DNA. ORGANISM Bombyx mori Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta; Pterygota; Neoptera; Holometabola; Lepidoptera; Ditrysia; Bombycoidea; Bombycidae. REFERENCE 1 (bases 1 to 9454) AUTHORS Spoerel,N., Nguyen,H.T. and Kafatos,F.C. TITLE Gene regulation and evolution in the chorion locus of Bombyx mori - sturctural and developmental characterization of four eggshell genes and their flanking DNA regions JOURNAL J. Mol. Biol. 190, 23-35 (1986) STANDARD full automatic REFERENCE 2 (sites) AUTHORS Mitsialis,S.A., Spoerel,N.A., Leviten,M. and Kafatos,F.C. TITLE A short 5'-flanking region is sufficient for developmentally correct expression of moth chorion genes in Drosophila JOURNAL Proc. Natl. Acad. Sci. U.S.A. 84, 7987-7991 (1987) STANDARD full staff_review REFERENCE 3 (sites) AUTHORS Spoerel,N. JOURNAL Unpublished (1989) STANDARD full staff_review COMMENT *source: strain=703 *source: clone=B2 From EMBL entry BMCHORIO; dated 16-FEB-1991. FEATURES Location/Qualifiers mRNA join(complement(976..1026),complement(464..866)) /gene="A.L12" mRNA join(1333..1409,1493..1995) /gene="B.L12" mRNA join(complement(7083..7165),complement(4379..4813)) /gene="A.L11" mRNA join(7443..7519,7939..8462) /gene="B.L11" CDS join(complement(976..1026),complement(519..866)) /gene="A.L12" /codon_start=1026 CDS join(1359..1409,1493..1927) /gene="B.L12" /codon_start=1359 CDS join(complement(7083..7133),complement(4481..4813)) /gene="A.L11" /codon_start=7133 CDS join(7469..7519,7939..8394) /gene="B.L11" /codon_start=7469 exon complement(464..866) /number=2 intron complement(867..975) /number=1 exon complement(976..1056) /number=1 TATA_signal complement(1081..1087) /note="TATA-Box of A.L12" misc_signal 1266..1271 /note="putative transcription signal" TATA_signal 1303..1309 /note="TATA-Box of B.L12" exon 1333..1409 /number=1 exon 1333..1409 intron 1410..1492 /number=1 exon 1493..1995 /number=2 exon 1493..1995 misc_feature complement(3972..4103) /pseudo /note="PSI-A.L11 pseudogene" exon complement(4379..4813) /number=2 intron complement(4814..7082) /number=1 repeat_unit 4916..4919 /note="insertion target site" repeat_unit 4920..5054 /rpt_type=terminal /note="LTR of transposon BM- A.L11" repeat_unit 6910..7044 /rpt_type=terminal /note="LTR of transposon BM- A.L11" repeat_unit 7045..7048 /note="insertion target site" exon complement(7083..7165) /number=1 TATA_signal complement(7190..7196) /note="TATA-Box of A.L11" misc_signal 7356..7361 /note="putative transcription signal" TATA_signal 7413..7419 /note="TATA-Box of B.L11" exon 7443..7519 /number=1 exon 7443..7519 intron 7520..7938 /number=1 exon 7939..8462 /number=2 exon 7939..8462 BASE COUNT 2979 a 1876 c 1933 g 2666 t ORIGIN 1 gaattcgtgg aactaacatt ccaaacccca gcatgtacaa gaataaagcc aacaaaagaa 61 ccatctagat ttttcggtac cgtagtcgcc cgaaaatatt aaaatctcac tcagggtcaa 121 aggaaatgtt ttatgcttca tttatatttt gtaccaagct ctgtagagat ttcttagagt 181 agtaattgat tgaggtgatc ggcatcacca gcggccgcga gaacatttct attacctgca 241 accactgtac ttcttcatag tagaccgaga catcacttta ctataatata atgtttcgcc 301 tactcaggga atccttcctg tcctcaatat tatcaaagaa tgtaggtact agacgtgtat 361 gttgttcaag atttttaatt aagtagcttt agttgaaacc aaattcttgg gaagaagtta 421 ttggaaagtc tcttaacaaa tcttaataaa aacagctacg cttgcatcga tcagagttta 481 attaatggag gattgccgta ttttctttct ttacattttc agtagtatcc accgaggcca 541 gcgcgtccac atccgcaggt gggagcgcag tgtccgcaga tggagacggc accagcggcg 601 caggcgggac ctccgtactc gacaccaccg atgatgggca cgcggccgcc gacagcggtg 661 acaccaccga cgggcagctc accggcgact ccaacgttac cgataccctc acctccgtat 721 gagccgcagc cggcgccgta tccaccgtcg atgccgttcc agccaacacc tagaccgttc 781 caaccaccac cgagtccgtt ccaaccattc cagccacctc cacaaccgca accgcctaga 841 ccacccaagt acaggccaca cacattctgt aacgagagcg aagattcacg tggacattcc 901 aatctatcag caaaaacaca aatgtagtag ttggtaattt caaatcagag agcacataaa 961 ataaacacta ctcacttgga tcaggcaggc ctgagcgcag aagagaagga aagcgaaggt 1021 agacatgttg ttgtattcag gtactagacg gagaatgcta ttactgcaca gcggcaatcc 1081 ttttatacga ataagtgtat tccaataagg gcgattacga caaagttttg aaatgtagaa 1141 ttgtgaaaaa aacttatttt tccttgattg acacgtatca tttagctgtc tccaaaagcc 1201 gcgccactag ttagggtaat ctcaatcaaa caaaatttca caaggtacag tgatgtaggt 1261 taaagtcacg tttttgagat aggacacttg agaaatattc cgtataaaac agacacaact 1321 gacatcgaac tcattctgaa gtcattcagt gaaacaacat ggccgctaaa ctcattctct 1381 tcgtctgcgc caccgccctc gtggcacagg tacgcctttt caattaaaac ttatatttaa 1441 tgtaaaacgc gttctaatat taatatattt aattatttca cattgttcac agtccgtttt 1501 gagcattggt tgtggttgcg gaggtcgtgg ttacggcggt ctgggctatg gtggtctggg 1561 ctacgggggt cttggaggtg gatgcggtcg tggtttcagc ggtggtggtc tccctgttgc 1621 tactgcctct gctgctccca ctgggcttgg gatagcttcc gagaacaggt atgagggtac 1681 cgtcggtgtc tgcggcaacc tgccgttcct tggtactgct gatgtcgctg gcgagttccc 1741 caccgccggt attggtgaaa tcgattacgg ctgcggaaac ggtgccgttg gtattacccg 1801 cgagggtgga ttcggctatg gagctggtta cggagacggc tacggtctcg gctttggagg 1861 ctacggaggc ggctacggtc tcggcaatgg aggctacggc ggatgcggat gtggctgggg 1921 ctactgaaca aattatcaac acgacgcttg tcattttata atcagaacac tcaaaatata 1981 ttttactcca gcatgacatt gtgtttcagt gtaataatga tgctccgtgt tgatacaata 2041 cagagataga atattactta ctgtcatcgt ggcttgtagg atgagatgcc cgggatactc 2101 gcaccaggcg atgcgaccac gccggtgctc gaatataaat tagtatccac attgaaaaaa 2161 gttataataa ttgaaaaggg taaattaaaa agaataattg cacagaactc cgaatatttt 2221 acaattgttt tatgtctgtg tttttgaact actaaggagt acaatataag cttaaacttt 2281 atgttctcag acgttgttgc aactaataat aatattgagg aagtagctct gtctgtttgt 2341 aaaatcttaa cacagaaatc ggtgtaaata gactttaaaa atttgtaaaa acagctcctt 2401 gatatttcta aactcatttg tacggaattt aactttaaca ttatttgtgt gcaacaattt 2461 ttttttctat actgcaactc agcaatctgt tacttctaaa acaataatct aatttgatgt 2521 cagattttca ttaggaaaag ttgagttagc tgagttgtgt ccccagtggt accattctca 2581 tctcctatct gcaaatctta ttgcgaggtc tggtatacta tttcttttta ggcgagagta 2641 tcttagactg cccctcctcc cctgcggctc tgcagccagc cgattaatgt gttggtcaag 2701 tcgtgtttgg taatttttgt tgtatatttc aatttcttcc ttcacttttc atagattcaa 2761 atccagattt acatatttgt tgcatatgta tggtggaata ttgaacatgg ttctcattat 2821 tttgctttga taccgctcta gtatttctag atatcaaaat taatcagtac aactaataaa 2881 acaaaaacaa tcagagatgc aataggaatt ttaaaagcgg tcaaaaaaat ggaaactttt 2941 acctcaaatg gggaagtgag cttcacgttc tagcggctac cacataataa cgaaagaata 3001 gctactataa aacagaacct caactctgcg acagaatcat cactataaca tttaactccc 3061 aacagaaata tgacacaata cacgaaatac taacggcatg accaaaccca acattgaagg 3121 cgaaccaaac attaagagaa acataccaga aaaatccagt gaattcccaa aaaaagatca 3181 acattaatca atataattaa taaaccaaat agtaacagag atgaaataaa aaataccagt 3241 agtcccgcag tagtcgaaat tcgactataa ttaattgtaa gtttgtacac tattatgatt 3301 gtattttata catcaataat cacaaatttc gccaagacta cactctacaa aatattaaca 3361 aagacaaatc atatttaatc tattctcaat atgacagcag tgtcaagaac aaaagtttga 3421 caataaatag tatgcatgcg tgtgtgcgtc aaatacatgg tatgtagtgt gtgtaatgtt 3481 ttctttattg atttaatgta tcttttatgc ataattttaa aaaatattag cattgtgcac 3541 ttcttctcta tattctctat aagtgtggaa aatttcatac tcctccgtcc acgcaatttt 3601 cgaaaaaggg atacaaagtt tttcttcacg tattaatata tagaaagata aggatgggac 3661 agaggttaat gaaatggaaa cttggaactc aaatggggag tggtattcac gttctggcgg 3721 ctataggtta agtactataa gtaagttaag taatataagt aactaagtaa gtacttagta 3781 ccagacaggt cgtgagtccg tctgcccatg aataggaaat atactgaacc ttgagtaatg 3841 aataaccaat gattttataa agtacggaaa atcagaaaat aataaacaaa gttttgatgc 3901 caagcgaact gtttattact taaatcaagt tatttgtatt tcaagatttt gtcattgatt 3961 tattgtcatt aataaccacc gcatccgcag tcgcaagtga gggcgaaacg tccgcagata 4021 gagacgcagc cgtcatcgca ggcaggacct ccaaagtcga caccatggaa gatgggcacg 4081 cggccaccga cagcagtgac accacagata tagaatgaaa tatatgaaat agacgtgtta 4141 cagtgctgaa gagacacact cgtcgtcatc cccaaggctc gctacactga tgggtcctgc 4201 aatgcccgaa tcagcggatt ctcatgacca ggttgtcggt agaaggccta ccctagctac 4261 gcctttcggt gttttatcac tactcgagaa ctttttgacc ccagccaaca cctgttctac 4321 tagcagttct gactgctgac agccacttca acctcacgat taaattaaac cagattttga 4381 tgcttgcaaa gatttatttt tcaatcaatt gtcaattttc aatgttaatg tttcatgaga 4441 acaggacctc gttgcatcat gccagttaat ttcttcagta atagagacca ccgtatccgc 4501 agccgcaggt aggggcgcaa tgtccgcaga tagagacgca gccgccagcg caggcgggac 4561 ctccgaactc gacaccaccg atgatgggca cgcggccacc gacagcggtg acaccaccga 4621 cgggcagcac accggcgaca cccacattac cgacgccctc gccgccatag ccaccgtagt 4681 aaccaccgcc gtatccgcca tagccatatc cgccgccgta tccacccaag ccgtagccga 4741 gtccgtagcc gcccaggccg cctccacagc cgcagcctcc cagtcctcta cccaggcact 4801 gtccgtacac gttctaaaat agtcacatag attaaaactt tggaaagaat cgcatactat 4861 ttcatcaaat agcaccgaga gagcagagga ctttacgtaa aataaaattt actttctgta 4921 gtttattaga gagggttctt gttctccttt taataaaagg attgctaagt gcgagttgca 4981 taaagataga cacacaatga actgatttgt tacccaacac atgtgctaag tcattattaa 5041 ataataaaac ataatattgg cgacgatcat aaaatactaa tatggagcgt aaatcaatca 5101 agagtttctt gtaaaatcgg ataattgagg cagttatatt gacagactaa aatattgttt 5161 tgaggtaaat gtaatcgaaa gtgttgctgt taaaaaggct aaattcttta ctgtgtgtgg 5221 ttctagaatg ttcgaaactg ttctcgcgtt aattacgcca agaaaatcta gtgatgcgac 5281 ttttgttgaa attgtaatca ttctaaccaa acattacagc ccgaaaccaa atgaaatttc 5341 tatgtcatac aaattctaca aacgagatca ggcaccaaac gaattggctt ttgattatat 5401 tgctactggc caaaacacca gacgagtttc caatagatgt tgctcaaata gtaatactac 5461 caaacgagac tcagttttgt ctcatgtacg gcatcatata ctctccggat ggccagctaa 5521 gataaataat gagtcgctac gtccatactg gcttcaccga aatgaatttt ccttgaatga 5581 agactgcatt ctaataggca ctcctgtaat aataccacca tcatttcggc agccagtttt 5641 agattgtttg aataaaactc atagtggcat cgttcaaatt aaagcgattg ctcgtagcaa 5701 cgtctggtgg ccacaaataa ataagatatt gaaaagtggt aaagaattgt aatcgctttt 5761 tggaaaatcg acatatgccc cttagaacaa cttatgaatg gataactcct accaaacctt 5821 ggtctcgtat tgacgtcgaa tttgcgagac tattccaaaa taaaatattc ctgattataa 5881 ttgacacgta ttcgcgatgg ccagaagtat tcatcgttaa caatacgact tcgtcgaccg 5941 ttgttaaaca ccttcgaaca atatttgcga cacacggatt gtatgaggta ttggtgtctg 6001 acaatggaac accatttgta tctgaagaaa cgagaaattt tctagagtct aataatatta 6061 gatatattac aacggcgcca catcatccgt ctactaacgg actggcagaa agaatgcttc 6121 aagcagtcaa ggacaagtta cggaagatgt acggtatctc ttgagttaca agacttccca 6181 atatattact aggacttcgc acaattttat gtgcaacaac aaataaaact ccatgggaat 6241 tattgatgaa caggcgtttg cgtaccttgt ttgatacact ccatccagac aatcttcaaa 6301 cgtgtaagac aaatgaacag aatgaaagaa atggcaacaa aaaaattaga ctcattgcgg 6361 ggcagaaagt gatgtacagg aactttggaa atggatcccg ttggttacca ggaacggtag 6421 tttacataaa tgggccagga aactatcaag tagaaactgg tgatggaaca gttgtgaata 6481 gacatataga tcaattactt aaaaaagaaa cagattctgg gcaggaaact gcagtaagag 6541 ggaaggaatt ggaattggaa tgtgaggcag tgaatgttga ggaacaagaa gatatgaaag 6601 gtatttctag tagtttggag gaacaggaaa ttatagagat accgagtccg gataaatggg 6661 cagaaatgtt aggaattcct cccgaaccaa aatcagaata ttctggtggt aaaatttacc 6721 ttatagtaga tttaactata attacattaa ttaaaacctt agatattatt cagtgtttaa 6781 tagtaaatat gtagaagatt atgattatga atctaatact ttaaattgtg actaagttgt 6841 aattgtgtct gtatttacgt gattaaatat tttgcaattt attatggata gtatatactt 6901 gggaagaaag tatgtagtgt attaatgagg gcacttgttc tccttttatt aaaaggatta 6961 ctaagtgcgg gttgcataaa gacagacaca caatgaactg atttgttacc caatacatgt 7021 gctaagtcat tattaaataa taaaacagaa tactttcaat ataaaataaa tgaaatactt 7081 acttggatca ggcaagcctg aacgcagagg aggaggaaag cgaaggtgga catgttgcaa 7141 tgtattcaga tacttgatct agaatgtttc caactacaga aaatccacct tatatagcag 7201 cggagggtcg tggtcacctt gggataacag aatttcataa tgaaaagttg tgaaactaca 7261 gtaatcctta ctgcgtttaa ctattttagt ttatttcaaa atttgacgag aatcagtgtt 7321 aactctgaag gttacaattt gaaaattctc ataagtcacg tcaatagttc attaagataa 7381 attctacgag aatgataagg caaatagttg tgtataaaag ctgaagcagc tcaagtgaac 7441 tcattctgaa gtcactcagt gaaacaacat ggccgctaaa ctcattctct tcgtctgcgc 7501 caccgccctc gtggcacagg tacgtcttta caattaaact tatatttaat gtaaaacgcg 7561 ttctaataat aatctatcta cgtggagtaa aactttgtac ccctttttac gaaaattgtg 7621 cagacggagg agtatcaaat ttcccagtag agaaggagtg cagaatgcta atatattttt 7681 tattatacat taaaaataca ttaaatcaat aaaaaaaaca tttcccacac taccatgtat 7741 ttgacacaca cacgcataaa tacttttttg tttatggcga aatctgtgaa tagagaagta 7801 taataaatag tctttgatag acccaatatt aatctagaac caatattaat gttcaaactt 7861 ataatgtcca ataattatag tcaaatttcg actactggga ggccactagt atatttaatt 7921 tcttcccatt gttcacagtc cgctttaggc atcggttgtg gttgtggttg tggaggtcgt 7981 ggctacggcg gtctgggcta tggtggtttg ggctatggtg gtctgggcta cgggggctat 8041 ggaggtggat gcggtcgtgg tttcagcggt ggtggtctcc ctgttgctac tgcctctgct 8101 gctcccactg ggcttgggat agcttccgag aacaggtacg agggtaccgt cggtgtctgt 8161 ggcaacctgc cgttccttgg tactgctgat gtcgctggcg agttccccac cgccggtatt 8221 ggtgaaatcc tctacggctg cggaaatggt gccgttggta ttacccgcga gggtggactc 8281 ggctttggag ctggttacgg aggcggctac ggtctcggct atggaggcta cggaggtggc 8341 tacggtctcg gctatggagg ctacggcgga tgcggatgtg gctgcggcta ctgaacgaat 8401 tgtcaacacg acgtttgtcc ttttataatc tgaacactca aaatatattt tactccagca 8461 tcaaattgtg tttcagtgta ataattttgc tacgtgacga tatgacacag agattactta 8521 ctgtcatcgt ggcttaaagg ataagacacc tagtgtactc gtactgagtt atgcgattca 8581 tgtatgatct tgggtgccat ttcacattca ttacatctca aaatacttta gagatgagtt 8641 atgaaatgaa tgaatgaatg aaatgcgttt atttcaggca acttaagcct ataaaatgtc 8701 acatacaatt acataacatc taaatcaaaa tacaataaaa ttaaaattac aatttatcaa 8761 aatgactaaa aacaaaaaca aacaaaaatg aaaccaaatc aaaattatta aaattaaaat 8821 tgtcaactac taatataaaa ttaaaattta taaaagaact gatacaataa atacagaaat 8881 aatgttaact gagtaaccgc caccacacca gtcactgtgt tagattaatg agagacagat 8941 gcttattaca acagtgtctt atataggggc agtccagtct gtttgcaatc atggccagtg 9001 ccgtgttgga gctggcccgc actctgcgta ccaaggatgc gcaccgcttg tgtatggtcg 9061 catgaaagca atccgtacga gccactgcga acatacccga ggcgctacaa aaccggggta 9121 gccccaacac agccctgaaa gcattattga actgaagttt gttataatat gtgttataca 9181 caatagttat ttctatcaaa atgaacattt ttgtaacaat ggtctgtgtt tgtacaaagc 9241 cgaagtaggg cattttgtgg ctcttgatgt tcgacagaat ctgagaccca ataaaaggct 9301 ttagttcggg gcatagcgct gatgttcgga aactcggtta ggtcaaactc cgtgtttcca 9361 agtgtttcca tctctccaag ctaaatataa acgtttgtag gtttataagg caattgtaag 9421 gattctccac caaaagtccg ctggagctga attc //