GenBank-Updates@genbank.bio.net (05/25/91)
LOCUS BMOCHORIO 9454 bp ds-DNA INV 25-MAY-1991
DEFINITION Bombyx mori chorion locus sequence encompassing gene pairs A/B.L12
and A/B.L11, pseudogene PSI-A.L11 and retrotransposon BM-A.L11.
ACCESSION X15557
KEYWORDS chorion protein; pseudogene; retrotransposon.
SOURCE Bombyx mori DNA.
ORGANISM Bombyx mori
Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
Pterygota; Neoptera; Holometabola; Lepidoptera; Ditrysia;
Bombycoidea; Bombycidae.
REFERENCE 1 (bases 1 to 9454)
AUTHORS Spoerel,N., Nguyen,H.T. and Kafatos,F.C.
TITLE Gene regulation and evolution in the chorion locus of Bombyx mori -
sturctural and developmental characterization of four eggshell
genes and their flanking DNA regions
JOURNAL J. Mol. Biol. 190, 23-35 (1986)
STANDARD full automatic
REFERENCE 2 (sites)
AUTHORS Mitsialis,S.A., Spoerel,N.A., Leviten,M. and Kafatos,F.C.
TITLE A short 5'-flanking region is sufficient for developmentally
correct expression of moth chorion genes in Drosophila
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 84, 7987-7991 (1987)
STANDARD full staff_review
REFERENCE 3 (sites)
AUTHORS Spoerel,N.
JOURNAL Unpublished (1989)
STANDARD full staff_review
COMMENT *source: strain=703 *source: clone=B2
From EMBL entry BMCHORIO; dated 16-FEB-1991.
FEATURES Location/Qualifiers
mRNA join(complement(976..1026),complement(464..866))
/gene="A.L12"
mRNA join(1333..1409,1493..1995)
/gene="B.L12"
mRNA join(complement(7083..7165),complement(4379..4813))
/gene="A.L11"
mRNA join(7443..7519,7939..8462)
/gene="B.L11"
CDS join(complement(976..1026),complement(519..866))
/gene="A.L12"
/codon_start=1026
CDS join(1359..1409,1493..1927)
/gene="B.L12"
/codon_start=1359
CDS join(complement(7083..7133),complement(4481..4813))
/gene="A.L11"
/codon_start=7133
CDS join(7469..7519,7939..8394)
/gene="B.L11"
/codon_start=7469
exon complement(464..866)
/number=2
intron complement(867..975)
/number=1
exon complement(976..1056)
/number=1
TATA_signal complement(1081..1087)
/note="TATA-Box of A.L12"
misc_signal 1266..1271
/note="putative transcription signal"
TATA_signal 1303..1309
/note="TATA-Box of B.L12"
exon 1333..1409
/number=1
exon 1333..1409
intron 1410..1492
/number=1
exon 1493..1995
/number=2
exon 1493..1995
misc_feature complement(3972..4103)
/pseudo
/note="PSI-A.L11 pseudogene"
exon complement(4379..4813)
/number=2
intron complement(4814..7082)
/number=1
repeat_unit 4916..4919
/note="insertion target site"
repeat_unit 4920..5054
/rpt_type=terminal
/note="LTR of transposon BM- A.L11"
repeat_unit 6910..7044
/rpt_type=terminal
/note="LTR of transposon BM- A.L11"
repeat_unit 7045..7048
/note="insertion target site"
exon complement(7083..7165)
/number=1
TATA_signal complement(7190..7196)
/note="TATA-Box of A.L11"
misc_signal 7356..7361
/note="putative transcription signal"
TATA_signal 7413..7419
/note="TATA-Box of B.L11"
exon 7443..7519
/number=1
exon 7443..7519
intron 7520..7938
/number=1
exon 7939..8462
/number=2
exon 7939..8462
BASE COUNT 2979 a 1876 c 1933 g 2666 t
ORIGIN
1 gaattcgtgg aactaacatt ccaaacccca gcatgtacaa gaataaagcc aacaaaagaa
61 ccatctagat ttttcggtac cgtagtcgcc cgaaaatatt aaaatctcac tcagggtcaa
121 aggaaatgtt ttatgcttca tttatatttt gtaccaagct ctgtagagat ttcttagagt
181 agtaattgat tgaggtgatc ggcatcacca gcggccgcga gaacatttct attacctgca
241 accactgtac ttcttcatag tagaccgaga catcacttta ctataatata atgtttcgcc
301 tactcaggga atccttcctg tcctcaatat tatcaaagaa tgtaggtact agacgtgtat
361 gttgttcaag atttttaatt aagtagcttt agttgaaacc aaattcttgg gaagaagtta
421 ttggaaagtc tcttaacaaa tcttaataaa aacagctacg cttgcatcga tcagagttta
481 attaatggag gattgccgta ttttctttct ttacattttc agtagtatcc accgaggcca
541 gcgcgtccac atccgcaggt gggagcgcag tgtccgcaga tggagacggc accagcggcg
601 caggcgggac ctccgtactc gacaccaccg atgatgggca cgcggccgcc gacagcggtg
661 acaccaccga cgggcagctc accggcgact ccaacgttac cgataccctc acctccgtat
721 gagccgcagc cggcgccgta tccaccgtcg atgccgttcc agccaacacc tagaccgttc
781 caaccaccac cgagtccgtt ccaaccattc cagccacctc cacaaccgca accgcctaga
841 ccacccaagt acaggccaca cacattctgt aacgagagcg aagattcacg tggacattcc
901 aatctatcag caaaaacaca aatgtagtag ttggtaattt caaatcagag agcacataaa
961 ataaacacta ctcacttgga tcaggcaggc ctgagcgcag aagagaagga aagcgaaggt
1021 agacatgttg ttgtattcag gtactagacg gagaatgcta ttactgcaca gcggcaatcc
1081 ttttatacga ataagtgtat tccaataagg gcgattacga caaagttttg aaatgtagaa
1141 ttgtgaaaaa aacttatttt tccttgattg acacgtatca tttagctgtc tccaaaagcc
1201 gcgccactag ttagggtaat ctcaatcaaa caaaatttca caaggtacag tgatgtaggt
1261 taaagtcacg tttttgagat aggacacttg agaaatattc cgtataaaac agacacaact
1321 gacatcgaac tcattctgaa gtcattcagt gaaacaacat ggccgctaaa ctcattctct
1381 tcgtctgcgc caccgccctc gtggcacagg tacgcctttt caattaaaac ttatatttaa
1441 tgtaaaacgc gttctaatat taatatattt aattatttca cattgttcac agtccgtttt
1501 gagcattggt tgtggttgcg gaggtcgtgg ttacggcggt ctgggctatg gtggtctggg
1561 ctacgggggt cttggaggtg gatgcggtcg tggtttcagc ggtggtggtc tccctgttgc
1621 tactgcctct gctgctccca ctgggcttgg gatagcttcc gagaacaggt atgagggtac
1681 cgtcggtgtc tgcggcaacc tgccgttcct tggtactgct gatgtcgctg gcgagttccc
1741 caccgccggt attggtgaaa tcgattacgg ctgcggaaac ggtgccgttg gtattacccg
1801 cgagggtgga ttcggctatg gagctggtta cggagacggc tacggtctcg gctttggagg
1861 ctacggaggc ggctacggtc tcggcaatgg aggctacggc ggatgcggat gtggctgggg
1921 ctactgaaca aattatcaac acgacgcttg tcattttata atcagaacac tcaaaatata
1981 ttttactcca gcatgacatt gtgtttcagt gtaataatga tgctccgtgt tgatacaata
2041 cagagataga atattactta ctgtcatcgt ggcttgtagg atgagatgcc cgggatactc
2101 gcaccaggcg atgcgaccac gccggtgctc gaatataaat tagtatccac attgaaaaaa
2161 gttataataa ttgaaaaggg taaattaaaa agaataattg cacagaactc cgaatatttt
2221 acaattgttt tatgtctgtg tttttgaact actaaggagt acaatataag cttaaacttt
2281 atgttctcag acgttgttgc aactaataat aatattgagg aagtagctct gtctgtttgt
2341 aaaatcttaa cacagaaatc ggtgtaaata gactttaaaa atttgtaaaa acagctcctt
2401 gatatttcta aactcatttg tacggaattt aactttaaca ttatttgtgt gcaacaattt
2461 ttttttctat actgcaactc agcaatctgt tacttctaaa acaataatct aatttgatgt
2521 cagattttca ttaggaaaag ttgagttagc tgagttgtgt ccccagtggt accattctca
2581 tctcctatct gcaaatctta ttgcgaggtc tggtatacta tttcttttta ggcgagagta
2641 tcttagactg cccctcctcc cctgcggctc tgcagccagc cgattaatgt gttggtcaag
2701 tcgtgtttgg taatttttgt tgtatatttc aatttcttcc ttcacttttc atagattcaa
2761 atccagattt acatatttgt tgcatatgta tggtggaata ttgaacatgg ttctcattat
2821 tttgctttga taccgctcta gtatttctag atatcaaaat taatcagtac aactaataaa
2881 acaaaaacaa tcagagatgc aataggaatt ttaaaagcgg tcaaaaaaat ggaaactttt
2941 acctcaaatg gggaagtgag cttcacgttc tagcggctac cacataataa cgaaagaata
3001 gctactataa aacagaacct caactctgcg acagaatcat cactataaca tttaactccc
3061 aacagaaata tgacacaata cacgaaatac taacggcatg accaaaccca acattgaagg
3121 cgaaccaaac attaagagaa acataccaga aaaatccagt gaattcccaa aaaaagatca
3181 acattaatca atataattaa taaaccaaat agtaacagag atgaaataaa aaataccagt
3241 agtcccgcag tagtcgaaat tcgactataa ttaattgtaa gtttgtacac tattatgatt
3301 gtattttata catcaataat cacaaatttc gccaagacta cactctacaa aatattaaca
3361 aagacaaatc atatttaatc tattctcaat atgacagcag tgtcaagaac aaaagtttga
3421 caataaatag tatgcatgcg tgtgtgcgtc aaatacatgg tatgtagtgt gtgtaatgtt
3481 ttctttattg atttaatgta tcttttatgc ataattttaa aaaatattag cattgtgcac
3541 ttcttctcta tattctctat aagtgtggaa aatttcatac tcctccgtcc acgcaatttt
3601 cgaaaaaggg atacaaagtt tttcttcacg tattaatata tagaaagata aggatgggac
3661 agaggttaat gaaatggaaa cttggaactc aaatggggag tggtattcac gttctggcgg
3721 ctataggtta agtactataa gtaagttaag taatataagt aactaagtaa gtacttagta
3781 ccagacaggt cgtgagtccg tctgcccatg aataggaaat atactgaacc ttgagtaatg
3841 aataaccaat gattttataa agtacggaaa atcagaaaat aataaacaaa gttttgatgc
3901 caagcgaact gtttattact taaatcaagt tatttgtatt tcaagatttt gtcattgatt
3961 tattgtcatt aataaccacc gcatccgcag tcgcaagtga gggcgaaacg tccgcagata
4021 gagacgcagc cgtcatcgca ggcaggacct ccaaagtcga caccatggaa gatgggcacg
4081 cggccaccga cagcagtgac accacagata tagaatgaaa tatatgaaat agacgtgtta
4141 cagtgctgaa gagacacact cgtcgtcatc cccaaggctc gctacactga tgggtcctgc
4201 aatgcccgaa tcagcggatt ctcatgacca ggttgtcggt agaaggccta ccctagctac
4261 gcctttcggt gttttatcac tactcgagaa ctttttgacc ccagccaaca cctgttctac
4321 tagcagttct gactgctgac agccacttca acctcacgat taaattaaac cagattttga
4381 tgcttgcaaa gatttatttt tcaatcaatt gtcaattttc aatgttaatg tttcatgaga
4441 acaggacctc gttgcatcat gccagttaat ttcttcagta atagagacca ccgtatccgc
4501 agccgcaggt aggggcgcaa tgtccgcaga tagagacgca gccgccagcg caggcgggac
4561 ctccgaactc gacaccaccg atgatgggca cgcggccacc gacagcggtg acaccaccga
4621 cgggcagcac accggcgaca cccacattac cgacgccctc gccgccatag ccaccgtagt
4681 aaccaccgcc gtatccgcca tagccatatc cgccgccgta tccacccaag ccgtagccga
4741 gtccgtagcc gcccaggccg cctccacagc cgcagcctcc cagtcctcta cccaggcact
4801 gtccgtacac gttctaaaat agtcacatag attaaaactt tggaaagaat cgcatactat
4861 ttcatcaaat agcaccgaga gagcagagga ctttacgtaa aataaaattt actttctgta
4921 gtttattaga gagggttctt gttctccttt taataaaagg attgctaagt gcgagttgca
4981 taaagataga cacacaatga actgatttgt tacccaacac atgtgctaag tcattattaa
5041 ataataaaac ataatattgg cgacgatcat aaaatactaa tatggagcgt aaatcaatca
5101 agagtttctt gtaaaatcgg ataattgagg cagttatatt gacagactaa aatattgttt
5161 tgaggtaaat gtaatcgaaa gtgttgctgt taaaaaggct aaattcttta ctgtgtgtgg
5221 ttctagaatg ttcgaaactg ttctcgcgtt aattacgcca agaaaatcta gtgatgcgac
5281 ttttgttgaa attgtaatca ttctaaccaa acattacagc ccgaaaccaa atgaaatttc
5341 tatgtcatac aaattctaca aacgagatca ggcaccaaac gaattggctt ttgattatat
5401 tgctactggc caaaacacca gacgagtttc caatagatgt tgctcaaata gtaatactac
5461 caaacgagac tcagttttgt ctcatgtacg gcatcatata ctctccggat ggccagctaa
5521 gataaataat gagtcgctac gtccatactg gcttcaccga aatgaatttt ccttgaatga
5581 agactgcatt ctaataggca ctcctgtaat aataccacca tcatttcggc agccagtttt
5641 agattgtttg aataaaactc atagtggcat cgttcaaatt aaagcgattg ctcgtagcaa
5701 cgtctggtgg ccacaaataa ataagatatt gaaaagtggt aaagaattgt aatcgctttt
5761 tggaaaatcg acatatgccc cttagaacaa cttatgaatg gataactcct accaaacctt
5821 ggtctcgtat tgacgtcgaa tttgcgagac tattccaaaa taaaatattc ctgattataa
5881 ttgacacgta ttcgcgatgg ccagaagtat tcatcgttaa caatacgact tcgtcgaccg
5941 ttgttaaaca ccttcgaaca atatttgcga cacacggatt gtatgaggta ttggtgtctg
6001 acaatggaac accatttgta tctgaagaaa cgagaaattt tctagagtct aataatatta
6061 gatatattac aacggcgcca catcatccgt ctactaacgg actggcagaa agaatgcttc
6121 aagcagtcaa ggacaagtta cggaagatgt acggtatctc ttgagttaca agacttccca
6181 atatattact aggacttcgc acaattttat gtgcaacaac aaataaaact ccatgggaat
6241 tattgatgaa caggcgtttg cgtaccttgt ttgatacact ccatccagac aatcttcaaa
6301 cgtgtaagac aaatgaacag aatgaaagaa atggcaacaa aaaaattaga ctcattgcgg
6361 ggcagaaagt gatgtacagg aactttggaa atggatcccg ttggttacca ggaacggtag
6421 tttacataaa tgggccagga aactatcaag tagaaactgg tgatggaaca gttgtgaata
6481 gacatataga tcaattactt aaaaaagaaa cagattctgg gcaggaaact gcagtaagag
6541 ggaaggaatt ggaattggaa tgtgaggcag tgaatgttga ggaacaagaa gatatgaaag
6601 gtatttctag tagtttggag gaacaggaaa ttatagagat accgagtccg gataaatggg
6661 cagaaatgtt aggaattcct cccgaaccaa aatcagaata ttctggtggt aaaatttacc
6721 ttatagtaga tttaactata attacattaa ttaaaacctt agatattatt cagtgtttaa
6781 tagtaaatat gtagaagatt atgattatga atctaatact ttaaattgtg actaagttgt
6841 aattgtgtct gtatttacgt gattaaatat tttgcaattt attatggata gtatatactt
6901 gggaagaaag tatgtagtgt attaatgagg gcacttgttc tccttttatt aaaaggatta
6961 ctaagtgcgg gttgcataaa gacagacaca caatgaactg atttgttacc caatacatgt
7021 gctaagtcat tattaaataa taaaacagaa tactttcaat ataaaataaa tgaaatactt
7081 acttggatca ggcaagcctg aacgcagagg aggaggaaag cgaaggtgga catgttgcaa
7141 tgtattcaga tacttgatct agaatgtttc caactacaga aaatccacct tatatagcag
7201 cggagggtcg tggtcacctt gggataacag aatttcataa tgaaaagttg tgaaactaca
7261 gtaatcctta ctgcgtttaa ctattttagt ttatttcaaa atttgacgag aatcagtgtt
7321 aactctgaag gttacaattt gaaaattctc ataagtcacg tcaatagttc attaagataa
7381 attctacgag aatgataagg caaatagttg tgtataaaag ctgaagcagc tcaagtgaac
7441 tcattctgaa gtcactcagt gaaacaacat ggccgctaaa ctcattctct tcgtctgcgc
7501 caccgccctc gtggcacagg tacgtcttta caattaaact tatatttaat gtaaaacgcg
7561 ttctaataat aatctatcta cgtggagtaa aactttgtac ccctttttac gaaaattgtg
7621 cagacggagg agtatcaaat ttcccagtag agaaggagtg cagaatgcta atatattttt
7681 tattatacat taaaaataca ttaaatcaat aaaaaaaaca tttcccacac taccatgtat
7741 ttgacacaca cacgcataaa tacttttttg tttatggcga aatctgtgaa tagagaagta
7801 taataaatag tctttgatag acccaatatt aatctagaac caatattaat gttcaaactt
7861 ataatgtcca ataattatag tcaaatttcg actactggga ggccactagt atatttaatt
7921 tcttcccatt gttcacagtc cgctttaggc atcggttgtg gttgtggttg tggaggtcgt
7981 ggctacggcg gtctgggcta tggtggtttg ggctatggtg gtctgggcta cgggggctat
8041 ggaggtggat gcggtcgtgg tttcagcggt ggtggtctcc ctgttgctac tgcctctgct
8101 gctcccactg ggcttgggat agcttccgag aacaggtacg agggtaccgt cggtgtctgt
8161 ggcaacctgc cgttccttgg tactgctgat gtcgctggcg agttccccac cgccggtatt
8221 ggtgaaatcc tctacggctg cggaaatggt gccgttggta ttacccgcga gggtggactc
8281 ggctttggag ctggttacgg aggcggctac ggtctcggct atggaggcta cggaggtggc
8341 tacggtctcg gctatggagg ctacggcgga tgcggatgtg gctgcggcta ctgaacgaat
8401 tgtcaacacg acgtttgtcc ttttataatc tgaacactca aaatatattt tactccagca
8461 tcaaattgtg tttcagtgta ataattttgc tacgtgacga tatgacacag agattactta
8521 ctgtcatcgt ggcttaaagg ataagacacc tagtgtactc gtactgagtt atgcgattca
8581 tgtatgatct tgggtgccat ttcacattca ttacatctca aaatacttta gagatgagtt
8641 atgaaatgaa tgaatgaatg aaatgcgttt atttcaggca acttaagcct ataaaatgtc
8701 acatacaatt acataacatc taaatcaaaa tacaataaaa ttaaaattac aatttatcaa
8761 aatgactaaa aacaaaaaca aacaaaaatg aaaccaaatc aaaattatta aaattaaaat
8821 tgtcaactac taatataaaa ttaaaattta taaaagaact gatacaataa atacagaaat
8881 aatgttaact gagtaaccgc caccacacca gtcactgtgt tagattaatg agagacagat
8941 gcttattaca acagtgtctt atataggggc agtccagtct gtttgcaatc atggccagtg
9001 ccgtgttgga gctggcccgc actctgcgta ccaaggatgc gcaccgcttg tgtatggtcg
9061 catgaaagca atccgtacga gccactgcga acatacccga ggcgctacaa aaccggggta
9121 gccccaacac agccctgaaa gcattattga actgaagttt gttataatat gtgttataca
9181 caatagttat ttctatcaaa atgaacattt ttgtaacaat ggtctgtgtt tgtacaaagc
9241 cgaagtaggg cattttgtgg ctcttgatgt tcgacagaat ctgagaccca ataaaaggct
9301 ttagttcggg gcatagcgct gatgttcgga aactcggtta ggtcaaactc cgtgtttcca
9361 agtgtttcca tctctccaag ctaaatataa acgtttgtag gtttataagg caattgtaag
9421 gattctccac caaaagtccg ctggagctga attc
//