GenBank-Updates@genbank.bio.net (05/25/91)
LOCUS PFDFDXX 6408 bp ds-DNA PHG 25-MAY-1991
DEFINITION Genome of the bacteriophage fd (Inoviridae).
ACCESSION V00602
KEYWORDS circular; coat protein; genome; origin of replication.
SOURCE Bacteriophage fd DNA.
ORGANISM Bacteriophage fd
Viridae; ss-DNA nonenveloped viruses; Inoviridae.
REFERENCE 1 (bases 1 to 6408)
AUTHORS Beck,E., Sommer,R., Auerswald,E.A., Kurz,C., Zink,B., Osterburg,G.,
Schaller,H., Sugimoto,K., Sugisaki,H., Okamoto,T. and Takanami,M.
TITLE Nucleotide sequence of bacteriophage fd DNA
JOURNAL Nucleic Acids Res. 5, 4495-4503 (1978)
STANDARD full automatic
COMMENT SWISS-PROT; P03617; COAB$BPFD. SWISS-PROT; P03655; VG1$BPFD.
SWISS-PROT; P03659; VG2$BPFD. SWISS-PROT; P03661; COAA$BPFD.
SWISS-PROT; P03664; VG4$BPFD. SWISS-PROT; P03669; VHED$BPFD.
SWISS-PROT; P03673; COAD$BPFD. SWISS-PROT; P03675; COA1$BPFD.
SWISS-PROT; P03677; COA2$BPFD.
KST FD Note difference from author's enumeration.
From EMBL entry INFDXX; dated 06-JUL-1989.
FEATURES Location/Qualifiers
CDS 226..1455
/note="GENE II"
/codon_start=226
CDS 1123..1455
/note="GENE X"
/codon_start=1123
CDS 1470..1730
/note="GENE V"
/codon_start=1470
CDS 1735..1833
/note="GENE VII"
/codon_start=1735
CDS 1833..1928
/note="GENE IX"
/codon_start=1833
CDS 1928..2146
/note="GENE VIII"
/codon_start=1928
CDS 2206..3477
/note="GENE III"
/codon_start=2206
CDS 3483..3819
/note="GENE VI"
/codon_start=3483
CDS 3824..4867
/note="GENE I"
/codon_start=3824
CDS 4848..6126
/note="GENE IV"
/codon_start=4848
BASE COUNT 1578 a 1295 c 1325 g 2210 t
ORIGIN
1 aatagtggac tcttgttcca aactggaaca acactcacaa ctaactcggc ctattctttt
61 gatttataag gatttttgtc attttctgct tactggttaa aaaataagct gatttaacaa
121 atatttaacg cgaaatttaa caaaacatta acgtttacaa tttaaatatt tgcttataca
181 atcatcctgt ttttggggct tttctgatta tcaaccgggg tacatatgat tgacatgcta
241 gttttacgat taccgttcat cgattctctt gtttgctcca gactttcagg taatgacctg
301 atagcctttg tagacctctc aaaaatagct accctctccg gcatgaattt atcagctaga
361 acggttgaat atcatattga cggtgatttg actgtctccg gcctttctca cccgtttgaa
421 tctttgccta ctcattactc cggcattgca tttaaaatat atgagggttc taaaaatttt
481 tatccctgcg ttgaaattaa ggcttcacca gcaaaagtat tacagggtca taatgttttt
541 ggtacaaccg atttagcttt atgctctgag gctttattgc ttaattttgc taactctctg
601 ccttgcttgt acgatttatt ggatgttaac gctactacca ttagtagaat tgatgccacc
661 ttttcagctc gcgccccaaa tgaaaatata gctaaacagg ttattgacca tttgcgaaat
721 gtatctaatg gtcaaactaa atctactcgt tcgcagaatt gggaatcaac tgttacatgg
781 aatgaaactt ccagacaccg tactttagtt gcatatttaa aacatgttga actacagcac
841 cagattcagc aattaagctc taagccatcc gcaaaaatga cctcttatca aaaggagcaa
901 ttaaaggtac tgtctaatcc tgacctgttg gaatttgctt ccggtctggt tcgctttgag
961 gctcgaattg aaacgcgata tttgaagtct ttcgggcttc ctcttaatct ttttgatgca
1021 attcgctttg cttctgacta taatagacag ggtaaagacc tgatttttga tttatggtca
1081 ttctcgtttt ctgaactgtt taaagcattt gagggggatt caatgaatat ttatgacgat
1141 tccgcagtat tggacgctat ccagtctaaa cattttacaa ttaccccctc tggcaaaact
1201 tcctttgcaa aagcctctcg ctattttggt ttctatcgtc gtctggttaa tgagggttat
1261 gatagtgttg ctcttaccat gcctcgtaat tccttttggc gttatgtatc tgcattagtt
1321 gagtgtggta ttcctaaatc tcaattgatg aatctttcca cctgtaataa tgttgttccg
1381 ttagttcgtt ttattaacgt agatttttcc tcccaacgtc ctgactggta taatgagcca
1441 gttcttaaaa tcgcataagg taattcaaaa tgattaaagt tgaaattaaa ccgtctcaag
1501 cgcaatttac tacccgttct ggtgtttctc gtcagggcaa gccttattca ctgaatgagc
1561 agctttgtta cgttgatttg ggtaatgaat atccggtgct tgtcaagatt actctcgacg
1621 aaggtcagcc agcgtatgcg cctggtctgt acaccgtgca tctgtcctcg ttcaaagttg
1681 gtcagttcgg ttctcttatg attgaccgtc tgcgcctcgt tccggctaag taacatggag
1741 caggtcgcgg atttcgacac aatttatcag gcgatgatac aaatctccgt tgtactttgt
1801 ttcgcgcttg gtataatcgc tgggggtcaa agatgagtgt tttagtgtat tctttcgcct
1861 ctttcgtttt aggttggtgc cttcgtagtg gcattacgta ttttacccgt ttaatggaaa
1921 cttcctcatg aaaaagtctt tagtcctcaa agcctccgta gccgttgcta ccctcgttcc
1981 gatgctgtct ttcgctgctg agggtgacga tcccgcaaaa gcggcctttg actccctgca
2041 agcctcagcg accgaatata tcggttatgc gtgggcgatg gttgttgtca ttgtcggcgc
2101 aactatcggt atcaagctgt ttaagaaatt cacctcgaaa gcaagctgat aaaccgatac
2161 aattaaaggc tccttttgga gccttttttt ttggagattt tcaacgtgaa aaaattatta
2221 ttcgcaattc ctttagttgt tcctttctat tctcactccg ctgaaactgt tgaaagttgt
2281 ttagcaaaac ctcatacaga aaattcattt actaacgtct ggaaagacga caaaacttta
2341 gatcgttacg ctaactatga gggctgtctg tggaatgcta caggcgttgt ggtttgtact
2401 ggtgacgaaa ctcagtgtta cggtacatgg gttcctattg ggcttgctat ccctgaaaat
2461 gagggtggtg gctctgaggg tggcggttct gagggtggcg gttctgaggg tggcggtact
2521 aaacctcctg agtacggtga tacacctatt ccgggctata cttatatcaa ccctctcgac
2581 ggcacttatc cgcctggtac tgagcaaaac cccgctaatc ctaatccttc tcttgaggag
2641 tctcagcctc ttaatacttt catgtttcag aataataggt tccgaaatag gcagggtgca
2701 ttaactgttt atacgggcac tgttactcaa ggcactgacc ccgttaaaac ttattaccag
2761 tacactcctg tatcatcaaa agccatgtat gacgcttact ggaacggtaa attcagagac
2821 tgcgctttcc attctggctt taatgaggat ccattcgttt gtgaatatca aggccaatcg
2881 tctgacctgc ctcaacctcc tgtcaatgct ggcggcggct ctggtggtgg ttctggtggc
2941 ggctctgagg gtggcggctc tgagggtggc ggttctgagg gtggcggctc tgagggtggc
3001 ggttccggtg gcggctccgg ttccggtgat tttgattatg aaaaaatggc aaacgctaat
3061 aagggggcta tgaccgaaaa tgccgatgaa aacgcgctac agtctgacgc taaaggcaaa
3121 cttgattctg tcgctactga ttacggtgct gctatcgatg gtttcattgg tgacgtttcc
3181 ggccttgcta atggtaatgg tgctactggt gattttgctg gctctaattc ccaaatggct
3241 caagtcggtg acggtgataa ttcaccttta atgaataatt tccgtcaata tttaccttct
3301 ttgcctcagt cggttgaatg tcgcccttat gtctttggcg ctggtaaacc atatgaattt
3361 tctattgatt gtgacaaaat aaacttattc cgtggtgtct ttgcgtttct tttatatgtt
3421 gccaccttta tgtatgtatt ttcgacgttt gctaacatac tgcgtaataa ggagtcttaa
3481 tcatgccagt tcttttgggt attccgttat tattgcgttt cctcggtttc cttctggtaa
3541 ctttgttcgg ctatctgctt actttcctta aaaagggctt cggtaagata gctattgcta
3601 tttcattgtt tcttgctctt attattgggc ttaactcaat tcttgtgggt tatctctctg
3661 atattagcgc acaattaccc tctgattttg ttcagggcgt tcagttaatt ctcccgtcta
3721 atgcgcttcc ctgtttttat gttattctct ctgtaaaggc tgctattttc atttttgacg
3781 ttaaacaaaa aatcgtttct tatttggatt gggataaata aatatggctg tttattttgt
3841 aactggcaaa ttaggctctg gaaagacgct cgttagcgtt ggtaagattc aggataaaat
3901 tgtagctggg tgcaaaatag caactaatct tgatttaagg cttcaaaacc tcccgcaagt
3961 cgggaggttc gctaaaacgc ctcgcgttct tagaataccg gataagcctt ctatttctga
4021 tttgcttgct attggtcgtg gtaatgattc ctacgacgaa aataaaaacg gtttgcttgt
4081 tcttgatgaa tgcggtactt ggtttaatac ccgttcatgg aatgacaagg aaagacagcc
4141 gattattgat tggtttcttc atgctcgtaa attgggatgg gatattattt ttcttgttca
4201 ggatttatct attgttgata aacaggcgcg ttctgcatta gctgaacacg ttgtttattg
4261 tcgccgtctg gacagaatta ctttaccctt tgtcggcact ttatattctc ttgttactgg
4321 ctcaaaaatg cctctgccta aattacatgt tggtgttgtt aaatatggtg attctcaatt
4381 aagccctact gttgagcgtt ggctttatac tggtaagaat ttatataacg catatgacac
4441 taaacaggct ttttccagta attatgattc aggtgtttat tcatatttaa ccccttattt
4501 atcacacggt cggtatttca aaccattaaa tttaggtcag aagatgaaat taactaaaat
4561 atatttgaaa aagttttctc gcgttctttg tcttgcgata ggatttgcat cagcatttac
4621 atatagttat ataacccaac ctaagccgga ggttaaaaag gtagtctctc agacctatga
4681 ttttgataaa ttcactattg actcttctca gcgtcttaat ctaagctatc gctatgtttt
4741 caaggattct aagggaaaat taattaatag cgacgattta cagaagcaag gttattccat
4801 cacatatatt gatttatgta ctgtttcaat taaaaaaggt aattcaaatg aaattgttaa
4861 atgtaattaa ttttgttttc ttgatgtttg tttcatcatc ttcttttgct caagtaattg
4921 aaatgaataa ttcgcctctg cgcgatttcg tgacttggta ttcaaagcaa acaggtgaat
4981 ctgttattgt ctcacctgat gttaaaggta cagtgactgt atattcctct gacgttaagc
5041 ctgaaaattt acgcaatttc tttatctctg ttttacgtgc taataatttt gatatggttg
5101 gctcaattcc ttccataatt cagaaatata acccaaatag tcaggattat attgatgaat
5161 tgccatcatc tgatattcag gaatatgatg ataattccgc tccttctggt ggtttctttg
5221 ttccgcaaaa tgataatgtt actcaaacat ttaaaattaa taacgttcgc gcaaaggatt
5281 taataagggt tgtagaattg tttgttaaat ctaatacatc taaatcctca aatgtattat
5341 ctgttgatgg ttctaactta ttagtagtta gcgcccctaa agatatttta gataaccttc
5401 cgcaatttct ttctactgtt gatttgccaa ctgaccagat attgattgaa ggattaattt
5461 tcgaggttca gcaaggtgat gctttagatt tttcctttgc tgctggctct cagcgcggca
5521 ctgttgctgg tggtgttaat actgaccgtc taacctctgt tttatcttct gcgggtggtt
5581 cgttcggtat ttttaacggc gatgttttag ggctatcagt tcgcgcatta aagactaata
5641 gccattcaaa aatattgtct gtgcctcgta ttcttacgct ttcaggtcag aagggttcta
5701 tttctgttgg ccagaatgtc ccttttatta ctggtcgtgt aactggtgaa tctgccaatg
5761 taaataatcc atttcagacg gttgagcgtc aaaatgttgg tatttctatg agtgtttttc
5821 ccgttgcaat ggctggcggt aatattgttt tagatataac cagtaaggcc gatagtttga
5881 gttcttctac tcaggcaagt gatgttatta ctaatcaaag aagtattgcg acaacggtta
5941 atttgcgtga tggtcagact cttttgctcg gtggcctcac tgattacaaa aacacttctc
6001 aagattctgg tgtgccgttc ctgtctaaaa tccctttaat cggcctcctg tttagctccc
6061 gttctgattc taacgaggaa agcacgttgt acgtgctcgt caaagcaacc atagtacgcg
6121 ccctgtagcg gcgcattaag cgcggcgggt gtggtggtta cgcgcagcgt gaccgctaca
6181 cttgccagcg ccctagcgcc cgctcctttc gctttcttcc cttcctttct cgccacgttc
6241 tccggctttc cccgtcaagc tctaaatcgg gggatccctt tagggttccg atttagtgct
6301 ttacggcacc tcgacctcca aaaacttgat ttgggtgatg gttcacgtag tgggccatcg
6361 ccctgataga cggtttttcg ccctttgacg ttggagtcca cgttcttt
//