GenBank-Updates@genbank.bio.net (05/25/91)
LOCUS PT4UVSY1 1357 bp ds-DNA PHG 25-MAY-1991
DEFINITION Bacteriophage T4 DNA repair gene uvsY for 15.8kD uvsY protein
ACCESSION X05134
KEYWORDS inverted repeat; overlapping genes; unidentified reading frame;
uvsY gene; uvsY protein.
SOURCE Bacteriophage T4 DNA.
ORGANISM Bacteriophage T4
Viridae; ds-DNA nonenveloped viruses; Myoviridae.
REFERENCE 1 (bases 1 to 1357)
AUTHORS Gruidl,M.E. and Mosik,G.
TITLE Sequence and transcripts of the bacteriophage T4 DNA repair gene
uvsY
JOURNAL Genetics 114, 1061-1079 (1986)
STANDARD full automatic
COMMENT See also m11495 for uvsY gene sequence with some differences
From EMBL entry MYUVSY1; dated 29-NOV-1987.
FEATURES Location/Qualifiers
CDS <1..381
/note="ORF UvsY.1 (AA 127)"
/codon_start=1
CDS complement(<1..79)
/note="ORF UvsY.2 (AA 26) (1 is 1st base in codon)"
/codon_start=79
promoter 383..389
/note="-35 region (MotA-dependant)"
promoter 405..410
/note="-10 region (MotA-dependant)"
misc_feature 414..418
/note="transcript start region"
repeat_region 422..434
/note="direct repeat"
repeat_region 432..444
/note="direct repeat^"
RBS 451..456
/note="Shine Dalgarno sequence"
CDS 461..871
/note="gpUvsY (AA 1-137)"
/codon_start=461
CDS 874..1095
/note="(1095 is 1st base in codon)"
/codon_start=874
RBS 1113..1119
/note="Shine Dalgarno sequence"
CDS 1125..1289
/note="ORF UvsY-2 (AA 1-55)"
/codon_start=1125
terminator 1316..1338
/note="terminator sequence"
repeat_unit 1316..1324
/note="inverted repeat A"
repeat_unit 1330..1338
/note="inverted repeat A'"
BASE COUNT 465 a 194 c 279 g 419 t
ORIGIN
1 aagctttatt ctgatattga cccggaaatg aaaatggatt ggaacaaaga cgtttccaga
61 tcgcttggat taaggtcaat taaaaacagt cttttgggaa ttattacaac aagaaaaggt
121 tcaagaccgt ttgaccctga atttggatgt gatttatcag accagctttt tgaaaatatg
181 actcctctta ctgctgacac ggttgaacgc aatatcgaaa gcgcagtaag aaactatgag
241 ccacgtattg ataaattagc agttaatgtg atacccgttt atgacgatta tactctgata
301 gtagaaatac gcttttcggt catcgataat cctgatgata ttgagcagat aaaactgcag
361 ctggcttcca gtaatagagt ataatgcttc acgttaaaac gtggtataat gaatctaagt
421 ccatccaata acaaccaata acaattgaat agagaacaat atgagattag aagatcttca
481 agaagaattg aagaaagatg tgtttataga ttcgactaaa ttacagtatg aagcagctaa
541 taatgtgatg ttatatagta aatggcttaa taagcattca agtattaaaa aggaaatgct
601 tagaattgaa gcacagaaaa aagttgctct taaagctaga ttagactact actcgggacg
661 aggagatggt gatgaattta gtatggatcg ttacgagaaa tcagaaatga agacagttct
721 atcagcggat aaggatgttt taaaggttga tacctcgttg cagtattggg ggattttatt
781 agatttctgt agcggagctc ttgatgctat taaatcacgt ggatttgcta ttaagcatat
841 tcaagacatg cgagcatttg aggctggaaa ataatgagat atagcattga tgatgctttt
901 aattatgaag aagaatttga aacggaaatt caattcttaa tgaaaaagca taatcttaag
961 cgtcaggata ttcgtatcct ggccgaccac ccgtgtggtg aagatgtcct ttatattaaa
1021 ggaaaatttg ccggatatct tgatgaatat ttttattcta aagatatggg cattgatatg
1081 catatgagag ttgtataaat agatataatt cagaggagac aatcatgtca gataagattt
1141 gtgttgtctg taaaactcca atcgattctg cattggttgt tgaaacagac aaaggtcctg
1201 tacatcctgg gccttgctat aattacatta aagaactacc agtttcagaa agttcggaag
1261 aacaattaaa tgaaacacaa cttttgctat agtgtgacct ttagtctata gttttggccc
1321 ttcctttttg gttgggcctt ttttaattta aaagctt
//