GenBank-Updates@genbank.bio.net (05/25/91)
LOCUS PT4UVSY1 1357 bp ds-DNA PHG 25-MAY-1991 DEFINITION Bacteriophage T4 DNA repair gene uvsY for 15.8kD uvsY protein ACCESSION X05134 KEYWORDS inverted repeat; overlapping genes; unidentified reading frame; uvsY gene; uvsY protein. SOURCE Bacteriophage T4 DNA. ORGANISM Bacteriophage T4 Viridae; ds-DNA nonenveloped viruses; Myoviridae. REFERENCE 1 (bases 1 to 1357) AUTHORS Gruidl,M.E. and Mosik,G. TITLE Sequence and transcripts of the bacteriophage T4 DNA repair gene uvsY JOURNAL Genetics 114, 1061-1079 (1986) STANDARD full automatic COMMENT See also m11495 for uvsY gene sequence with some differences From EMBL entry MYUVSY1; dated 29-NOV-1987. FEATURES Location/Qualifiers CDS <1..381 /note="ORF UvsY.1 (AA 127)" /codon_start=1 CDS complement(<1..79) /note="ORF UvsY.2 (AA 26) (1 is 1st base in codon)" /codon_start=79 promoter 383..389 /note="-35 region (MotA-dependant)" promoter 405..410 /note="-10 region (MotA-dependant)" misc_feature 414..418 /note="transcript start region" repeat_region 422..434 /note="direct repeat" repeat_region 432..444 /note="direct repeat^" RBS 451..456 /note="Shine Dalgarno sequence" CDS 461..871 /note="gpUvsY (AA 1-137)" /codon_start=461 CDS 874..1095 /note="(1095 is 1st base in codon)" /codon_start=874 RBS 1113..1119 /note="Shine Dalgarno sequence" CDS 1125..1289 /note="ORF UvsY-2 (AA 1-55)" /codon_start=1125 terminator 1316..1338 /note="terminator sequence" repeat_unit 1316..1324 /note="inverted repeat A" repeat_unit 1330..1338 /note="inverted repeat A'" BASE COUNT 465 a 194 c 279 g 419 t ORIGIN 1 aagctttatt ctgatattga cccggaaatg aaaatggatt ggaacaaaga cgtttccaga 61 tcgcttggat taaggtcaat taaaaacagt cttttgggaa ttattacaac aagaaaaggt 121 tcaagaccgt ttgaccctga atttggatgt gatttatcag accagctttt tgaaaatatg 181 actcctctta ctgctgacac ggttgaacgc aatatcgaaa gcgcagtaag aaactatgag 241 ccacgtattg ataaattagc agttaatgtg atacccgttt atgacgatta tactctgata 301 gtagaaatac gcttttcggt catcgataat cctgatgata ttgagcagat aaaactgcag 361 ctggcttcca gtaatagagt ataatgcttc acgttaaaac gtggtataat gaatctaagt 421 ccatccaata acaaccaata acaattgaat agagaacaat atgagattag aagatcttca 481 agaagaattg aagaaagatg tgtttataga ttcgactaaa ttacagtatg aagcagctaa 541 taatgtgatg ttatatagta aatggcttaa taagcattca agtattaaaa aggaaatgct 601 tagaattgaa gcacagaaaa aagttgctct taaagctaga ttagactact actcgggacg 661 aggagatggt gatgaattta gtatggatcg ttacgagaaa tcagaaatga agacagttct 721 atcagcggat aaggatgttt taaaggttga tacctcgttg cagtattggg ggattttatt 781 agatttctgt agcggagctc ttgatgctat taaatcacgt ggatttgcta ttaagcatat 841 tcaagacatg cgagcatttg aggctggaaa ataatgagat atagcattga tgatgctttt 901 aattatgaag aagaatttga aacggaaatt caattcttaa tgaaaaagca taatcttaag 961 cgtcaggata ttcgtatcct ggccgaccac ccgtgtggtg aagatgtcct ttatattaaa 1021 ggaaaatttg ccggatatct tgatgaatat ttttattcta aagatatggg cattgatatg 1081 catatgagag ttgtataaat agatataatt cagaggagac aatcatgtca gataagattt 1141 gtgttgtctg taaaactcca atcgattctg cattggttgt tgaaacagac aaaggtcctg 1201 tacatcctgg gccttgctat aattacatta aagaactacc agtttcagaa agttcggaag 1261 aacaattaaa tgaaacacaa cttttgctat agtgtgacct ttagtctata gttttggccc 1321 ttcctttttg gttgggcctt ttttaattta aaagctt //