GenBank-Updates@genbank.bio.net (05/25/91)
LOCUS P29P29B 5708 bp ds-DNA PHG 25-MAY-1991
DEFINITION Left end of bacteriophage phi-29 coding for 15 potential proteins
Among these are the terminal protein and the proteins encoded by
the genes 1, 2 (sus), 3, and (probably) 4.
ACCESSION V01155
KEYWORDS terminal protein; unidentified reading frame.
SOURCE Bacteriophage phi-29 DNA.
ORGANISM Bacteriophage phi-29
Viridae; ds-DNA nonenveloped viruses; Podoviridae.
REFERENCE 1 (bases 1 to 5708)
AUTHORS Yoshikawa,H. and Ito,J.
TITLE Nucleotide sequence of the major early region of bacteriophage
phi-29
JOURNAL Gene 17, 323-335 (1982)
STANDARD full automatic
COMMENT SWISS-PROT; P03679; VG1$BPPH2. SWISS-PROT; P03680; DPOL$BPPH2.
SWISS-PROT; P03681; TERM$BPPH2. SWISS-PROT; P03682; VG4$BPPH2.
SWISS-PROT; P03683; VG5$BPPH2. SWISS-PROT; P03685; VG6$BPPH2.
From EMBL entry POP29B; dated 06-JUL-1989.
FEATURES Location/Qualifiers
CDS complement(136..228)
/note="reading frame 1"
/codon_start=228
CDS complement(268..360)
/note="reading frame 2"
/codon_start=360
CDS complement(370..510)
/note="reading frame 3"
/codon_start=510
CDS complement(530..703)
/note="reading frame 4"
/codon_start=703
CDS complement(703..870)
/note="reading frame 5"
/codon_start=870
CDS complement(860..1117)
/note="reading frame 6 (may be gene 1)"
/codon_start=1117
CDS complement(860..1126)
/note="reading frame 6 (may be gene 1)"
/codon_start=1126
CDS complement(1148..2872)
/note="reading frame 7 gene 2 (sus)"
/codon_start=2872
CDS complement(2889..3686)
/note="reading frame 8 gene 3, term. protein"
/codon_start=3686
CDS complement(3578..3952)
/note="reading frame 9 (may be gene 4)"
/codon_start=3952
CDS complement(3974..4345)
/note="reading frame 10 (may be gene 4)"
/codon_start=4345
CDS complement(4351..4485)
/note="reading frame 11"
/codon_start=4485
CDS complement(4413..4610)
/note="reading frame 12"
/codon_start=4610
CDS complement(4610..4921)
/note="reading frame 13"
/codon_start=4921
CDS complement(4824..4934)
/note="reading frame 14"
/codon_start=4934
CDS complement(5464..5619)
/note="reading frame 15"
/codon_start=5619
BASE COUNT 1564 a 1276 c 924 g 1944 t
ORIGIN
1 aaagtaagcc cccaccctca catgatacca ttctcctaat atcgacataa tccgtcgatc
61 ctcggcatac catgatcagg gagggaaact actacttaat atatcaatct atagacctac
121 tagataggtt tgtcaatgaa caacataaaa cgacacagaa tcccacgttt tagcgcttcg
181 tctgtgtcgc atgtaaaagg ttatcaaagt agcgtgcact tttgccatga ttgacaacca
241 atcaacaaag tatgtgggct gaactcaatc agggtttaat ccccaacata cacatgacaa
301 tggaagtacc gtaccattga tactaccatt atagcatact ctgtaatagt tgtcaaacat
361 taatagttaa ttctcccatt ctaaaacgat ttgatcgttt atttctacaa ttagatggac
421 tccatttgta ccgaatggat ggacttgtaa ctttatcgta ccatctttaa acatattcgc
481 aatatgttct tctaactctg cacgcttcat gatataaccc tccttatcag atgtcaaata
541 tagttttctc acggctcaac tcaaacctat caaacttgta acccctcggc gctttatact
601 taatcaacac actagccgca tccgttctac tacgtgctgt cgtatcatag cgcctaacta
661 ccccattgtc gttaatagag aagatagtta ctagataact catagtactt tatccaacct
721 tagttttata atttcatcag cagtgttacc gtatagaacc tcaaagtctg acaaactcag
781 tcccttgtgg tactcataat actgtttacc gtcatcatct tgaagcaaca ttgtcacatc
841 gtatgagtca acaaaatcat tttgcaccat gtggagcacc tccaaataac acctttataa
901 cccatgtggc gtaatcattg ttttccatcc tagaaagctc atacaatgcg tttttcatga
961 gtttattttc atgctctagt ttagtcatct tcttttctaa ctcaaggtct atcatcttta
1021 agtctccgtc tacaggtgct ataatgcctt gattacccca tttagagttt ttccatgtgc
1081 cttctaatct cttctcttga tcgaagattt tacccattac aaacatctcc ttttaaacaa
1141 acgtttattt gattgtgaat gtgtcatcaa ccagaaccac cccgcccggc acttgcacag
1201 gcttaggctt cattttccga ctgaatccga ctttgaaatt ctcaaacgta acctctttct
1261 taatcttgtc agtcattccc gcacatttaa cactaaattt tatatcagtg taatcatctg
1321 gactaccttc tactaactta ccatctactt ctttcatata gatgtcttgt atataggtct
1381 tctgtctcag atatttagct cttttgaatg tactttcatg tgcccagtat cccaatttct
1441 tagggtcaac tatatctttt attacatcag gtatctctgt acccgttaaa tgtatgctgt
1501 cagtatcaca gtatattatc cgatcataac aagcctgtgc cgctgtaatt gtcgtgtatc
1561 tagcccatgc agtgatgaaa acgcccatag gtgtataaac agggtctttt gtttcctctt
1621 ctccaagtct gaaacctagc gccccattct cttttaaata agggactttc cctgtaacat
1681 cagggttact agcgaattta ccgtatagac tgtttaacat cagttttgct agttgcttga
1741 tcgctccttc tgatgtcgtc ttgatgtacg tccatttatc tataaaatct ttaaacaaac
1801 ctgtagttgc tttaaatttt aagccgctga tatattcaac gttatataaa tcgtagtgtt
1861 ctttcattaa ttctaggtct acatttgaca accagaggtc ggctatctcc ccgccgctac
1921 tttttaggta ctcattacct ttataaaacc tacttctttt tatctgtata gtgggtatat
1981 agccctcttt caattcgaac tcacatctga tatgctgtat gtgtagtggg taatcttcgt
2041 cccaaacgta tttaccctcg aatactatag gttcaccata tggaaggaga cgactataca
2101 tctgtgcagg atatagacta ttaacatcga agaccatgcc ttctccgatt tctttttctt
2161 tgaacctatc atttaaccat gtaaaaccac ctctataggc gtatctcact tccttatcga
2221 gtccaagact caatgtagga aacacctttt tgaatttctt agtggttata atatccttga
2281 aaccttttag actgtcactg cctgctgtca tccggtctaa accttgctta aactgaatta
2341 acagagcttc cgcaataatc tgaatatcgt ttttaatata ggcgtattct tcgggtgtta
2401 tcttatagcc gactggtctt tctttgtggt aatcaatatc acctttaaga acagttagtt
2461 taaagtcttt agctatcttc ttaacaggaa acggtagttt ctttaagctg tcatatatca
2521 ctgtatgtat cttacgtttc cctttgtagc ctaaacatat atcaatcatg taccattgtc
2581 ccatgcgaga tatgatcgta ttatatgtgt ttggcaatcc gtcagccgac cacttaaaac
2641 cattacgttc caaccagtta atgataaaag ctccgtcaaa tttgaggtta tggaaatata
2701 gatcagcttg taccttcaac acccacgcca taaactcatc caggctatta cctattttgt
2761 actcactgtg atcttctata ttcatataac catacgccca taccctacag tcttccactt
2821 tagtagttgt ctcaaagtca caactataca tctttctcgg catatgcttc atcctttaac
2881 ggagcctaga acccctttaa gcttagatca aagtcacccc ttcgatactg ttccaagtat
2941 gacagtattt tatatacatt accttctacg ttctccactg tgtttccctc actatcaaat
3001 tcctcaaagg atatttctga tattctgaga aacaattcat agaagtcatc aggaggtatc
3061 ttttttaatt cttcgatcag ttcatctgcc gcatcaaatg aattgaaact accctcaacg
3121 ctcttaataa agtttaactg taactgtatc attttctttt cataatactg agggtctgtt
3181 ctcatctcca tgctttcttc tagggttcgc aaacggctat agcttcgcac cttgctaaag
3241 tcaaaatcat ggggtctatt aattcctgta acgtgtgcag gacttgtcat agctatccgt
3301 tgttcaattg tcccttgcgg cttaccgcct gcatagtatt ctttgtcttt catagccttg
3361 attttctcat ctactaaccg ctgaacctct tttgtgttac gttcaatctc agctatctta
3421 gctttactag ccaccacacc gtatgcattc ttttcgaact gataacgcat attagcacgg
3481 ttagtgaaag aggacgcttg ttccttccac ttattgaact gcgcccgtgt ttcaaatgaa
3541 tcaaggtcag gtatatcaat ttcagcggta aggtctacac catacttttt cttcgttctc
3601 gcaatcttgg cttttgtatt cttgaccaat cgagcgtatt cggctttgtc attatcctta
3661 atgcgtatac gtggacttct cgccatgttg cgttatctcc tttcaaccaa gcatggaaac
3721 cacgcttttc aacttctgaa tagaacgtga tgtctgcgag catatccata ttccacggtg
3781 taacagcgac ccgttctatc ttcttattaa atttcttcct gtattcttgg tatccatcga
3841 gaaacttgtt caaatacaat tcacttgaaa agaaaaacgt gacatcggtg ttagatgcca
3901 cgtattcaga ttccttcaag ttatgataga tacctctttg tgttttaggc atctatattt
3961 tacctcctgt ttatagggat agttgtaagc taaagaatac gttaccttta ctagatgttc
4021 cttgaaccac tttaacctta aacgtttcaa gcttatgacg agtcacaagg tcaattaagt
4081 cagatgcggc ttctgctaca gtcttagaga tagcggaata taacgacccg tcagccgcaa
4141 aaatagtagt aactgtttct tccttagcgt ccccgtatgt atcggacact tgcttatatt
4201 gagcaatggc gttggcttct ataattgttc catctggaag gtttttaaaa gattgtccgc
4261 cgcctgtctg agcattaaag attttgattt gtccttcaag agtttctgtg tcaaaagtag
4321 cctttacgat gtttgtgttt tccattatta atcatccttt tcattttggt ttatttgata
4381 ggtcgtgcgt gttaagagag tgttaagagt taaacgatct tgaaactggt tgttctgatg
4441 acaacttgtc cgcctacatt tgcggcaact ttctgcgctt cccatttatc tttaaacccg
4501 taagcttgtt ctgaatcgtg tgttaggtca atgcttttat aattaagatt gaaggtgttt
4561 atgaatagcg ctccaactaa tactagaacc ttctcttgtg tttccatcat tcagcaacct
4621 gttcttctgg agcttctgtt tgttcctctt gatcttcgtc tttctctacc cgaacggtag
4681 caacttcaag gaatttttct acaggtagct cataaacctc tgtgttaggt tcaacgctta
4741 ccacttgaac aggttcgcct ttatatttgc gcttcattct ccattgagcc tgttccattg
4801 tcagattacc cacaaatgtt tcagatggta gttgctctac ctgaacctct ccgtccacca
4861 tcaccatttt ggcaacgttg acggttgtct ttgtgatttc tctctgcatc atttttgcca
4921 tttcttcgtc ccactttcta tttatatttg tagactctgt atctcttcta ctcttttatt
4981 atatcaccct gttcgacaat tttcaacact tttctataaa aagttcgaca aagttttaca
5041 aggttttaat aaaaggttgt tgtctacgtt ctctatttaa ccacacctgt ataacttttt
5101 gcaagacttt tttataaaat gttgacgttt ttcgacaaga acgcccacaa atccttatgt
5161 atcaagggtt cacgtggtat aattaagtag tactaataga ttatagaaag aggtgaaaca
5221 tatgccatta aaaccagaag aacacgaaga tattttgaat aagcttttag accctgagtt
5281 ggctcaatca gaaagaacgg aagctcttca acagctcaga gtgaactacg gttcttttgt
5341 gtccgagtac aatgatttaa caaaatctca tgaaaagtta gccgctgaaa aagatgatct
5401 gatcgtgtca aatagtaagc ttttcagaca gattggtttg acagacaaac aggaagaaga
5461 tcacaagaaa gctgatatta gtgaaacaat cacgatcgag gacttagaag caaagtaatt
5521 ataatagaag aaaagaggta caacattcat gcgaattaca tttaacgacg tgaaaacgtc
5581 tctaggtatt accgaatcat acgacatcgt gaatgccatt cgtaacagtc agggcgataa
5641 cttcaaaagt tatgtgccgc tagcaactgc gaacaacgtc gcagaagtcg gggcaggtat
5701 cctgatca
//