GenBank-Updates@genbank.bio.net (05/25/91)
LOCUS P80PHI80X 1639 bp ds-DNA PHG 25-MAY-1991
DEFINITION Lambdoid bacteriophage phi 80 int-xis region (integrase-excisionase
region)
ACCESSION X04051
KEYWORDS attachment site; excisionase; int gene; integrase;
recombination gene; xis gene.
SOURCE Bacteriophage phi-80 DNA.
ORGANISM Bacteriophage phi-80
Viridae; ds-DNA nonenveloped viruses; Siphoviridae.
REFERENCE 1 (bases 1 to 1639)
AUTHORS Leong,J.M., Nunes-Dueby,S.E., Oser,A.B., Lesser,C.F., Youderian,P.,
Susskind,M.M. and Landy,A.
TITLE Structural and regulatory divergence among site-specific
recombination genes of lambdoid phage
JOURNAL J. Mol. Biol. 189, 603-616 (1986)
STANDARD full automatic
COMMENT SWISS-PROT; P05998; VXIS$BPPH8. SWISS-PROT; P06155; VINT$BPPH8.
From EMBL entry STPHI80X; dated 09-MAR-1987.
FEATURES Location/Qualifiers
misc_feature <1..6
/note="attP core region (phage attachment)"
CDS 136..1383
/note="pot. int-polypeptide (aa 1-416) (longest form, no
atg)"
/codon_start=136
CDS complement(1386..1580)
/note="xis-polypeptide (aa 1-65)"
/codon_start=1580
RBS complement(1587..1590)
/note="pot. ribosome binding site"
BASE COUNT 450 a 367 c 410 g 412 t
ORIGIN
1 ttaaattgtc atttggcata ttacgaacaa ttccgcgtaa aaacgttctg ttacgctaaa
61 cccttatcca gcaggctttc aaggatgtaa accataacac tctgcgaact agtgttacat
121 tgcgtgtagc tttgagtggg caactttgtg tacacttttg tgtacccaaa aacaaaaatg
181 tgtacccatt caatgatcac cgacacaaag ctcaggaagg cgctcggcaa gaaaagagat
241 gatatcgaga ttatttctga ttcgcacggg ctcaacgcca gaatcagcca ggccggaaaa
301 atatcatttt tctatcggta tcgctgggcc ggtaaagcgg taaaactcaa tgttggtgat
361 tatcctgcaa tgagtatcac ccaggcaaga gagcgtcgcc aacaattcag aaactggtta
421 actgagggac tggatccgcg agagcaggtg aagctggata agcagacccg acaggaagcg
481 atgtccgttg ccgaagcgtt caattactgg attgaaaggc actgtatcgc taacgggcta
541 gttaaagtcg attactatcg ccaggtgttt gagaaacata tcgccgaacc gatgaagaat
601 gtcaaagtcg ataacacagc gaaaatgcac tggatcaacg tcttcgattc tatagaaagc
661 agggtgatgg ctcattacat gctttcgctg tgcaaacggg cgtttaggtt ctgcgttaac
721 agaagtgtga tcgcctcaaa cccgctcgag ggattactgc catctgatgt cgggcaaaag
781 cctaaaaaga gaactcgcag gatggacgat gacgatctgc gcaaaatcta tcagtggttg
841 aaaagccata tgtcgataga gtccgttttc ctggtgaaat ttattatgct taccggatgc
901 cgtacggctg agattcgact tagtgagaga tcatggtttc gattggatga taatgagtgg
961 gtcgtgcctg cgggcagtta taaaactcgg gtacatatta gaaggggact ctcagacgcc
1021 gccgttaacc tggtcagaaa tcacctcaag aaaataaaca ccaatcacct ggtgacttca
1081 caacgtaaaa ttgatggcgg gatcaaagat tcgcccgttc attcacctgt ggcatccaat
1141 tacgcccgtt ctatttggaa tggaacaggt atggcagagt ggtcgcttca tgatatgagg
1201 cggacgatag ccacaaatct ctctgagtta ggttgcccgc cgcacgtaat tgaaaagctg
1261 ctcgggcatc agatggtggg ggttatggcg cattacaacc ttcatgacta tatcgatgat
1321 cagaaacact ggctccgcgt ttggcagagc catcttgaag agatcatcgg agagcccttc
1381 agttaattta tcttcttttt atcctcccac tctttgattg actcagagcg ccagcggtta
1441 gggttgccgg gccagtcagg gggtgggaac gggcatacga agccccgagg cattgtgtct
1501 gcactttgcc atgaccaaag ggttttgcgt gaaattttgt agcgactggt caggtctgac
1561 gttaccaaaa tatcatccat agctctctcc agttgcccgt tcgggccatt caaaatcttt
1621 ttcaaccaac ctgcccggg
//