GenBank-Updates@genbank.bio.net (05/25/91)
LOCUS MPOMPS12B 1100 bp ds-DNA ORG 25-MAY-1991
DEFINITION Marchantia polymorpha chloroplast gene rps12 exon 2&3 for ribosomal
protein S12
ACCESSION X03698
KEYWORDS inverted repeat; ribosomal protein; ribosomal protein S12;
ribosomal protein S7.
SOURCE Chloroplast Marchantia polymorpha DNA.
ORGANISM Chloroplast Marchantia polymorpha
Eukaryota; Plantae; Embryobionta; Bryophyta; Hepaticopsida;
Marchantiidae; Marchantiales; Marchantiineae; Marchantiaceae.
REFERENCE 1 (bases 1 to 1100)
AUTHORS Fukuzawa,H., Kohchi,T., Shirai,H., Ohyama,K., Umesono,K.,
Inokuchi,H. and Ozeki,H.
TITLE Coding sequences for chloroplast ribosomal protein S12 from the
liverwort, Marchantia polymorpha, are separated far apart on the
different DNA strands
JOURNAL FEBS Lett. 198, 11-15 (1986)
STANDARD full automatic
COMMENT Data kindly reviewed (29-JUN-1986) by K. Ohyama
From EMBL entry CHMPS12B; dated 06-JUL-1989.
FEATURES Location/Qualifiers
promoter 55..59
/note="put. -35 region"
promoter 84..89
/note="put. -10 region"
misc_feature 92..93
/note="junction of inverted repeat IR(A) and large single
copy region (LSC)"
repeat_unit 139..142
/note="inverted repeat a"
repeat_unit 143..148
/note="inverted repeat b"
repeat_unit 151..155
/note="inverted repeat c"
repeat_unit 157..161
/note="inverted repeat c'"
repeat_unit 163..168
/note="inverted repeat b'"
repeat_unit 170..173
/note="inverted repeat a'"
CDS 177..408
/note="put. ribosomal protein S12, exon 2 (aa 39-115) (408
is 1st base in codon)"
/codon_start=177
repeat_unit 884..889
/note="inverted repeat d"
repeat_unit 901..906
/note="inverted repeat d'"
CDS 909..931
/note="put. ribosomal protein S12, exon 3 (aa 116-123)
(909 is 2nd base in codon)"
/codon_start=909
CDS 984..1100
/note="ribosomal protein S7 (aa 1-39)"
/codon_start=984
BASE COUNT 474 a 123 c 150 g 353 t
ORIGIN
1 tcaaattttt atgttaaaaa aatacatata gaagaaaaaa agaaaaataa ttgattgaat
61 ttaagaaata aaatgttata aactataatc atttgaacga gaagccgtat gaaatgaaaa
121 tatcaagtac ggttttgtaa agtgacaatt taggtaactt atttgtcaac ttttccacta
181 caacaccaaa aaaaccaaac tctgccttac gaaaaatagc tcgagttaga ctaacctctg
241 gatttgaaat tactgcatat attccaggta ttggccataa tttgcaagaa cattcagttg
301 ttttggtaag aggaggaagg gtcaaagatt tacctggtgt aagatatcat attattagag
361 gaacactgga tgctgtagga gtaaaagatc gtcaacaagg gcgttctagt gcgttgtata
421 ttataatcta ttaaaatgta tcattttaga tacctaattt attgctgata atatgtaaaa
481 aatagctaac cagtgattaa aatttacatt ttaaaacgga aaaaaagcag gctatatgta
541 tataaaataa aataaaatat tatctatatt atatactata caatatctag ggttttattt
601 atagttaaaa taaaaattta agttttccct tactttttaa ttcaaaataa aaaaaatttt
661 acttttttag aacaagttaa aataaatagc aaaaataaaa aaatttattt ttatacaata
721 tttttataaa taaacctaag gattttttat ttaacgatta taaaatacaa gatttccaat
781 agtaaaacac tggaaacgga tactcaatta aaagtgagta aacatcaata aaattaaacg
841 atgtaaaaag ccgtattcgt tgaaaatcgg atgtacggtt tggagggaga taaaaaaatc
901 caccctacaa tatggagtaa aaaagtcaaa ataaatttaa aataactctt aaataaaaaa
961 attaacttta attatttatt attatgtcac gtaaaagtat tgcagaaaaa caagttgcaa
1021 aacctgatcc aatatatcgg aatcgattag ttaatatgtt agttaatcgt attttaaaaa
1081 atggaaaaaa atcattagct
//