GenBank-Updates@genbank.bio.net (05/25/91)
LOCUS SPISOATPS 6724 bp ds-DNA ORG 25-MAY-1991
DEFINITION Spinach plastid genes rps2, atpI, atpH, atpF, atpA, trnR and trnG
coding for ribosomal protein S2, one CF(1) and three CF(O) subunits
of ATP synthase and tRNA-Arg and tRNA-Gly
ACCESSION X05916
KEYWORDS ATP synthase; ATP synthase cf0 subunit; ATP synthase cf1 subunit;
photosynthesis; transfer RNA-Arg; transfer RNA-Gly.
SOURCE Chloroplast Spinacia oleracea DNA.
ORGANISM Chloroplast Spinacia oleracea
Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida;
Caryophyllidae; Caryophyllales; Chenopodiaceae.
REFERENCE 1 (bases 1 to 6724)
AUTHORS Hudson,G.S., Mason,J.G., Holton,T.A., Koller,B., Cox,G.B.,
Whitfeld,P.R. and Bottomley,W.
TITLE A gene cluster in the spinach and pea chloroplast genomes encoding
one CF(1) and three CF(0) subunits of the H(+)-ATP synthase complex
and the ribosomal protein S2
JOURNAL J. Mol. Biol. 196, 283-298 (1987)
STANDARD full automatic
COMMENT SWISS-PROT; P00843; ATPH$SPIOL. SWISS-PROT; P06450; ATPA$SPIOL.
SWISS-PROT; P06451; ATPI$SPIOL. SWISS-PROT; P06453; ATPF$SPIOL.
SWISS-PROT; P08242; RS2$SPIOL.
see x03775 for related sequence
Data kindly reviewed (11-MAR-1988) by Hudson G.S.
From EMBL entry CHSOATPS; dated 06-JUL-1989.
FEATURES Location/Qualifiers
misc_feature 347..348
/note="transcript initiation region"
misc_feature 374..375
/note="transcript initiation region"
CDS 518..1225
/note="rps2 protein (AA 1-236)"
/codon_start=518
misc_feature 1244..1245
/note="transcript initiation region"
CDS 1433..2173
/note="atpI protein (cf0 IV subunit) (AA 1- 247)"
/codon_start=1433
misc_feature 2497..2497
/note="transcript initiation site"
misc_feature 2815..2816
/note="transcript initiation region"
CDS 2869..3111
/note="atpH protein (cf0III subunit) (AA 1-81 )"
/codon_start=2869
CDS 3510..3654
/note="atpF protein (cf0I subunit) (AA 1-48) (3654 is 1st
base in codon)"
/codon_start=3510
intron 3655..4419
/note="intron"
CDS 4420..4826
/note="atpF protein (AA 49-183) (4420 is 2nd base in
codon)"
/codon_start=4420
CDS 4895..6415
/note="atpA protein (cf1 alpha) (AA 1-507)"
/codon_start=4895
tRNA complement(6486..6557)
/note="tRNA-Arg"
tRNA complement(6665..6711)
/note="tRNA-Gly (3' end)"
intron 6712..>6724
/note="intron"
BASE COUNT 2229 a 1037 c 1344 g 2114 t
ORIGIN
1 ctcgagtttt agcaaaagca gctctacggg gccgtattga ttggttgaaa ggactaaaag
61 aaaacgttgt tctggggggg atgatacctg ttggtaccgg attcaaagga ttcgtacacc
121 attcaagtca acataaggac attcctttga aaacaaaaaa gcagaattta ttcgagggag
181 aaatgggaga tattttgttt taccacagag aattatttga gtcttgtctt tcaaagaatt
241 aaagaatttc tgtaatagat caaaacaaca ataatttttg gggtttatat agaagaaatt
301 catctttttt atcttttatg tatttgttat ggttatttaa tttagtaata aaataaagaa
361 attaaataac cataacaaat agaaaggaat taatggtttt ggttgtatat caatggccaa
421 tccaaggtag aaaagaaggt tccattggaa caatttttta tttcagaata cctcatctct
481 ttaataatat taaaaaaaag agaaagtgtg gggagaaatg acaagaagat attggaacat
541 caatttggaa gagatgatgg aagcgggagt tcattttggt cacggtactc ggaaatggaa
601 tcctcgaatg tcgccttata tctctgcaaa atgtaaaggt attcatatta taaatcttac
661 tagaactgct cgttttttat cagaggcttg tgatttagtt tttgatgcat caagtagagg
721 aaaacaattt ttaattgttg ggacaaaaaa taaagcagct gattcagtag cacgggctgc
781 aataagggct cgctgtcatt atgttaataa aaagtggctt gggggtatgt taacgaattg
841 gtccacgaca gaaacgagac ttcacaaatt cagggacttg agaatggaac aaacggcagg
901 gagactcgct cgtcttccaa agagagatgc ggcggtggtg aagagacaat tatctcactt
961 gcaaacatat ttgggtggga tcaaatatat gacagggtta ccggatattg taatcatcgt
1021 tgatcaacag gaagaatata cggcccttcg agaatgtatt actttgggaa ttccaactat
1081 ttgtttaatt gatacaaatt gtaacccgga tctcgcagat atttcgattc cggcaaatga
1141 tgacgctata gcttcaattc gattaattct taccaaatta gtatttgcaa tttgtgaagg
1201 ccgctctagc tatataagaa atccttgatt cataataaaa tcaaaaattg acttcctaaa
1261 ttctctatcg gttactagat tttgaatctc aaaaactagt tcaaaataac aggggatatt
1321 atgtaattaa tcagtatccg aaatagaaaa ttttaattaa agtagacaag tcgagaaaga
1381 gctgattgaa tcaaaataat ttttttaagt tatatttctg taagaggaca atatgaatgt
1441 tctatcatat tcaatcaacc cgctaaaggg gttatatgct atatcgggtg tggaagtagg
1501 tcaacatttt tattggcaaa taggaggttt ccaaatccat ggccaggtcc ttataacttc
1561 ttgggttgta attgctatct tattaggttc agctgctata gctgttcgga gtccgcaaac
1621 aattccgact ggtggtcaaa atttttttga atatgtcctt gaattcatcc gagacgtgag
1681 caaaactcaa attggcgaag aatatcgccc gtgggttccc tttattggga ctatgtttct
1741 atttattttt gtttctaatt ggtcaggggc tcttttacct tggaaaatca tacagttacc
1801 tcatggggag ttagccgcac ccacgaacga tataaatact actgttgctt tagctttact
1861 cacgtcagta gcctatttct atgcaggtct tacaaaaaaa ggattaggtt attttggtaa
1921 atacattcaa ccaactccaa ttcttttacc cattaacatc ttagaagatt tcacaaaacc
1981 gctatcactt agttttcgac ttttcggaaa tatattagcg gatgaattag tagttgttgt
2041 tcttgtttct ttagtacctt tagtggttcc tatacctgtc atgtttcttg gcttatttac
2101 aagtggtatt caggctctta tttttgcaac tttagccgca gcttatatag gcgaatccct
2161 ggaaggtcat cattgatttg tcttaggaag agtttatctc ctagtttaga tatatgtgta
2221 tgtgtggctc aagatactct ataaagataa tctatttaga gcatataaat atccaaatac
2281 atacagtcta gtggtaatag aaaaaacgat attcgagaag tgtaaaaaaa aaagacgttg
2341 gttagtcgag aggggatacc cctgttatat ggaatctaat gactataagc taattcttgc
2401 agattcgatg tttcgaagaa tgttcaaaaa ttcgattgaa tttcaaatat aataggcggt
2461 ttacgttatg taagaaacct atgtatattt tatattagat attgacaagt tatatatgaa
2521 agaatattta atttgcccta cttgaatttg gatagagaca ccaaccgacg aagtcctttc
2581 ctattcgttt atgactgcga attgaatgga taaacagaca aaatataaaa aaaggtcgaa
2641 gaatgattag aaaaagaaaa aggaaatgga aaaactcaag ttgtattgat tcagaaagac
2701 tcaacaatat aggaactaaa aaaatcaagt ctttctaatt atttaataat attaattatt
2761 atttcaactg gataaatatt agcaatggaa taattaagtc ataatgcatt ggttgattgt
2821 atcattaacc atttcttttt tttttttgtg tgtgtgagga acttaatcat gaatccactg
2881 attgctgccg cttccgttat tgctgctgga ttggctgtag ggcttgcttc tattggacct
2941 ggagttggtc aaggtactgc tgcgggacaa gctgtagaag gtattgcgag acagcccgaa
3001 gcagaaggaa aaatacgagg tactttatta cttagtttag cgtttatgga agctttaaca
3061 atttatggat tggttgtagc attagcgctt ttatttgcga atccttttgt ttaatccgaa
3121 aaggaaaaga aataggagaa atacacattt cttttatagt cttgaacttg caggttgctt
3181 tttcacattt ataagaaaat atcgctccta cacaattact tattcgttga gaaaataata
3241 cacggaaagg acttaatttg aggatgaaga attcgtgtta cccactcggt ttcttctttc
3301 ctcccccttt ttagtccgaa ggagaagtgt tgcaacaaag agagtatttc gaaattcaca
3361 tgaaacctag tacctaatta gtaattctat aaatccaata agtattattc ttattgggaa
3421 tctcaataaa aaaaataaaa ttcatttaga agtagcaaac aattgaaata atacaacgat
3481 ttttttgttt atctataaga ggagatcata tgaaaaatgt aaccgattct ttcgttttct
3541 tgggtcactg gccatccgcc gggagtttcg ggtttaatac cgatatttta gcaacaaatc
3601 taataaatct cagtgtagtg cttggtgtat tgatcttttt tggaaaggga gtgtgtgcgg
3661 gttgtttatt tcaaaaatag gttggattca accaactgta ccgctttttt taattagggc
3721 gaaaggtgca tgatttcagc aatgacttct gaaattaata ataaagaaat catatgtaag
3781 aactagagca tttcgtgatt tgttggtaaa tatacttttg attctctatc aaccaataat
3841 gtgggaggat aacatggtta aaacttaaat tgtttgaagt ccaggcacat gcagggtatt
3901 ctttctacca ccatgttaat acttaaatat accgaatacc gaggctaaaa ttaaataaag
3961 taaagaaaca tagttacaaa tttttcgata tataacactc atgtcgataa aattgttgga
4021 atctcttatt tattgttata ggaaaaatgt ttcggctttt tttttattaa gtaaataaat
4081 gcaaaggctg agtcgatgac ctacgtataa aataagaaac atttttggat ttgaataaaa
4141 aaaaaacaac tttgctgaca attacttata tatttttttt tggggggtca gaagagttct
4201 ccgaatattc tagtcttgat tagtgatggg tttccatttt ttgtcgacta tgaacagaga
4261 agagaggata agttcattac attcaaaaaa gatatggaaa tttgccataa aaaattgaag
4321 taattgagcg tgagagccaa atgaattgaa aaattcacgt ttggttcggg aagggatcat
4381 gaatgttttg aaatgaatgg agagataatc tactttcatt aagtgattta ttagataatc
4441 gaaaacagag gatcttgaat actattcgaa attcagaaga actacgcgga aaggccattg
4501 aacagctgga aaaagcccgg gctcgcttaa agaaagtcga aatggacgcg gatcagtttc
4561 gagtgaatgg atattctgaa atagaacgag aaaagatgaa tttgattaat tcaacttata
4621 aaactttaga acaatttgaa aattacaaaa acgaaaccat tcagtttgaa caacaaaaag
4681 cgattaatca agtccgacag cgggttttcc aacaagcctt acaaggagct ctaggaactc
4741 tgaatagttg tttgaacaat gagttacatt tacggaccat caatgctaat attggcatgt
4801 ttggtgcgat gaacgaaata actgattagt ccttctattt aattgtaggt attatttttt
4861 tgtttcaaaa aaaaaaagaa tttaagaaag actcatggca accattcgag cagatgaaat
4921 tagcaaaatt atccgtgaac gtattgaagg atataatcga gaagtaaagg ttgtaaatac
4981 cggtacagtg cttcaagtgg gtgacggcat tgctcgtatt cacggtcttg atgaagtaat
5041 ggcaggtgaa ttagtagaat ttgaagaggg aacaataggt attgctctga atttggaatc
5101 aaataatgtt ggtgttgtat taatgggtga cgggttgatg atacaagagg gaagttctgt
5161 aaaagcaaca ggaagaattg ctcagatacc cgtgagtgag gcttatttag ggcgtgttat
5221 aaatgcccta gctaaaccta ttgatggtag gggtgaaatt acagcttctg aatctcggtt
5281 aattgaatct cccgctcctg gtattatgtc cagacgttcc gtgtatgagc ctcttcaaac
5341 cggacttatt gctattgatg caatgatccc tgtagggcgt ggtcagcgag aattaattat
5401 cggggacaga caaactggta aaacagcagt agccacagat acgattctca atcaacaagg
5461 acaaaatgta atatgtgttt atgtagctat tggacaaaaa gcatcttctg tggcgcaggt
5521 agttactaac ttccaggaaa ggggagcaat ggaatacact attgtggtag ccgaaacagc
5581 ggattccccc gctacattac agtatctcgc tccttatacc ggagcggcgc tggcggaata
5641 ttttatgtac cgtgagcgac acactttaat catttatgat gatctttcca aacaagcaca
5701 agcttatcga caaatgtctc ttctattacg aagaccacct ggacgtgaag cttatccggg
5761 agatgtcttt tatttgcatt cacgcctttt ggaaagagcc gctaaattaa gttctctttt
5821 aggtgaagga agtatgaccg ctttaccaat agtcgagacc caagcaggag atgtttcggc
5881 ttatattcct actaatgtaa tttccattac agatggacaa atattcttat ccgccgatct
5941 attcaatgct ggaatcagac cggctattaa tgtgggtatt tctgtttctc gggtaggatc
6001 tgcggctcaa attaaagcca tgaaaaaagt agctggtaaa ttaaaattgg aactggcgca
6061 atttgcagaa ttagaagcct ttgcacaatt tgcttctgat cttgataaag ctactcagaa
6121 tcaattggca agagggcaac gattacgcga attgcttaaa caaccccaat ccgcccctct
6181 cacggtagaa gaacaggtaa tgactatcta taccggaacg aatggttatc ttgattcatt
6241 agaacttgat caagtaagaa aatatcttgt tgaattacgt acttatgtaa aaacgaataa
6301 accggagttc caagaaatta tatcttctac caagacattt actgaggaag cagaagccct
6361 tttaaaagaa gctattcaag aacagatgga acgctttcta cttcaggaac aagcataaag
6421 aaatcgatcc ctcttcataa aaaaaatacc gttttgcgaa tatctaaaaa tatatggaaa
6481 taaattgcgt ccaataggat ttgaacctat accaaaggtt tagaagacct atgtcctatc
6541 cattagacta tggacgcttt tcattccgat ttattatcat ttttacttat tttttgtttt
6601 gaaaaaacaa cgtattgtat gtgagatgag acaatttttt agaattgcgt attaaactca
6661 atagagcggg tagcgggaat cgaacccgca tcgttagctt ggaaggctaa gggttatagt
6721 cgac
//