GenBank-Updates@genbank.bio.net (05/25/91)
LOCUS HASCOXII 1217 bp ds-DNA ORG 25-MAY-1991
DEFINITION Hansenula saturnus mitochondrial gene for cytochrome oxidase
subunit II (cox II)
ACCESSION X02439
KEYWORDS cytochrome oxidase; direct repeat; inverted repeat; oxidase.
SOURCE Mitochondrion Hansenula saturnus DNA.
ORGANISM Mitochondrion Hansenula saturnus
Eukaryota; Plantae; Thallobionta; Eumycota; Hemiascomycetes;
Endomycetales; Saccharomycetaceae.
REFERENCE 1 (bases 1 to 1217)
AUTHORS Lawson,J.E. and Deters,D.W.
TITLE Nucleotide sequence of the mitochondrial cytochrome oxidase subunit
II gene in the yeast Hansenula saturnus
JOURNAL Curr. Genet. 9, 351-360 (1985)
STANDARD full automatic
COMMENT SWISS-PROT; P06029; COX2$HANSA.
From EMBL entry HWCOXII; dated 07-NOV-1985.
FEATURES Location/Qualifiers
misc_feature 68..76
/note="pot. transcription start region"
misc_feature 239..266
/note="pot. ribosome binding region or regulatory AT-rich
region"
CDS 267..1007
/note="Cox II (aa 1-247)"
/codon_start=267
misc_feature 272..287
/note="palindrome sequence"
repeat_unit 272..279
/note="inverted repeat A"
misc_feature 278..288
/note="palindrome sequence"
repeat_unit 278..282
/note="inverted repeat B"
repeat_unit 280..287
/note="inverted repeat A'"
repeat_unit 284..288
/note="inverted repeat B'"
repeat_unit 286..291
/note="inverted repeat C"
repeat_region 294..301
/note="direct repeat 1"
repeat_unit 294..299
/note="inverted repeat C'"
misc_feature 376..385
/note="palindrome sequence"
repeat_unit 376..380
/note="inverted repeat D"
repeat_unit 381..385
/note="inverted repeat D'"
misc_feature 416..423
/note="palindrome sequence"
repeat_unit 416..419
/note="inverted repeat E"
repeat_unit 420..423
/note="inverted repeat E'"
misc_feature 470..479
/note="palindrome sequence"
repeat_unit 470..474
/note="inverted repeat F"
repeat_unit 475..479
/note="inverted repeat F'"
repeat_region 569..575
/note="direct repeat 2"
misc_feature 652..661
/note="palindrome sequence"
repeat_unit 652..656
/note="inverted repeat G"
repeat_unit 657..661
/note="inverted repeat G'"
misc_feature 743..761
/note="palindrome sequence"
repeat_unit 743..751
/note="imp. inverted repeat H"
repeat_unit 753..761
/note="imp. inverted repeat H'"
misc_feature 791..803
/note="palindrome sequence"
repeat_unit 791..796
/note="inverted repeat I"
repeat_unit 798..803
/note="inverted repeat I'"
repeat_unit 821..827
/note="inverted repeat J"
repeat_unit 833..839
/note="inverted repeat J'"
misc_feature 862..869
/note="palindrome sequence"
repeat_unit 862..865
/note="inverted repeat K"
repeat_unit 866..869
/note="inverted repeat K'"
misc_feature 979..988
/note="palindrome sequence"
repeat_unit 979..983
/note="inverted repeat L"
repeat_unit 984..988
/note="inverted repeat L'"
repeat_region 996..1003
/note="direct repeat 1"
repeat_region 1023..1029
/note="direct repeat 2"
misc_feature 1063..1073
/note="pot. transcription termination signal or processing
region"
misc_feature 1100..1126
/note="pot. functional region"
BASE COUNT 445 a 146 c 153 g 473 t
ORIGIN
1 aagcttatat agtttaatgg ttaaaactat tgtctcatat gcaatcaatg ttcgggttca
61 aatcccacta taagtatata tatttaaaac tgattgatct atattattaa tattaggaat
121 attatttgac attagtttga tttcttcctg gcggagcctt ttgcgttgcc ggcacggtaa
181 ttaaaattga acttatgtta attaacctat attaataatt atatagatat tatatatcta
241 aaaaataaaa aaaaaaataa aaagaaatgt tattattaat taataattta attttaaatg
301 atgttccgac accttgaggt ttatacttcc aagattcgtc aactccaaac caagaaggta
361 ttatcgaatt acatgataat attatgttct acttagtatt aatcttatgt cttgtatcat
421 gattattatt cagtattgtt aaagattcaa gtaaaaatcc attaccacat aaatatttag
481 tacatggaca aacaattgaa attatttgaa ctattttacc tgctgtagta ttattaatta
541 ttgctttccc atcatttatc ttattatatt tatgtgatga agttatttct cctgcaatga
601 ctattaaagc tattggatta caatgatact gacgttatga atactcagat ttcattaatg
661 attcaggtga aacaattgaa ttcgaatcat atgttattcc tgaagattta ttagaagatg
721 gtcaattacg tttattagat acagatacat ctgttgtatg tcctgttaat actcatattc
781 gttttattgt atcagctgct gatgttattc atgattttgc aattccttca ttaggaatta
841 aagttgtagc tagtcctgga cgtttaaacc aagtatctgc attaattcaa agagaagggg
901 tatattatgg gatgtgctcg gaactttgtg gcgtagcaca ttccgcaatg ccaataaaaa
961 ttgaagtagt atcacttaaa gaattcttaa catgattaaa tgaacaataa tatatacata
1021 tttttatgta tattatacta aattatccat attccattat aaaataatat tttatatatt
1081 attaattatt ttatataaat aaaaaaaaaa tgaatattaa taattttaaa taaatataac
1141 tactctaatt aagaaatagt attttcacct tttcaattat gaataggtga tttatataaa
1201 taataattat ttaaaat
//