GenBank-Updates@genbank.bio.net (05/25/91)
LOCUS OHOPHSYII 2894 bp ds-DNA ORG 25-MAY-1991
DEFINITION Oenothera hookeri plastid DNA for psbB, psbH and psbN genes for
chlorophyll a-binding apoprotein, 10 kDa phosphoprotein, and
unknown protein of photosystem II, respectively
ACCESSION X55900
KEYWORDS chlorophyll a-binding protein; phosphoprotein; photosynthesis;
photosystem II; psbB gene; psbH gene; psbN gene.
SOURCE Chloroplast Oenothera hookeri DNA.
ORGANISM Chloroplast Oenothera hookeri
Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida;
Rosidae; Myrtales; Onagraceae.
REFERENCE 1 (bases 1 to 2894)
AUTHORS Offermann-Steinhard,K.
JOURNAL Unpublished (1990)
STANDARD full automatic
REFERENCE 2 (bases 323 to 2894)
AUTHORS Offermann-Steinhard,K. and Herrmann,R.G.
TITLE Nucleotide sequences of psbB and psbH, the plastid encoded genes
for CP47 and the 10 kDa phosphoprotein of Photosystem II in
Oenothera hookeri and argillicola
JOURNAL Nucleic Acids Res. 18, 6452-6452 (1990)
STANDARD full automatic
COMMENT From EMBL entry OHPHSYII; dated 05-NOV-1990.
FEATURES Location/Qualifiers
misc_feature 305..340
/note="put. stem loop structure"
repeat_unit 305..311
/note="inverted repeat A"
repeat_unit 334..340
/note="inverted repeat A'"
promoter 345..350
/note="put. -35 region (psbB)"
promoter 369..374
/note="put. -10 region (psbB)"
precursor_RNA 381..>2083
/note="psbB transcript"
precursor_RNA 505..>2083
/note="psbB transcript"
RBS 546..549
/note="put. rRNA binding site"
misc_feature 548..586
/note="put. stem loop structure"
repeat_unit 548..559
/note="inverted repeat B"
CDS 557..2080
/note="psbB product, chlorophyll a-binding apoprotein (AA
1-508)"
/codon_start=557
repeat_unit 575..586
/note="inverted repeat B'"
misc_feature 1504..1531
/note="put. stem loop structure"
repeat_unit 1504..1512
/note="inverted repeat C"
repeat_unit 1523..1531
/note="inverted repeat C'"
misc_feature 2381..2419
/note="put. stem loop structure"
misc_feature 2381..2395
/note="inverted repeat D'"
repeat_unit 2400..2419
/note="inverted repeat D'"
CDS complement(2423..2551)
/note="psbN product, unknown protein"
/codon_start=2551
CDS 2658..2876
/note="psbH product, 10 kDa phosphoprotein (AA 1-73)"
/codon_start=2658
BASE COUNT 778 a 533 c 665 g 918 t
ORIGIN
1 gagtttataa agaaataaag attttgagtc gcatcctgta tggtgagaaa tatcatcagc
61 ccagcaatgt gattcgcgac ctcgaagtga attgcgtcgc ctaaaaagat ggatctggtt
121 cgataaagta cgttatacag gtcaacccaa gtcgcgtcgt cttcctcttc atcttcttcg
181 tctccgtcaa gcaggaaagg gattttaggc ataccaatcg gcataaaaat aaaaagcgag
241 caagaaaacc gcgaccctaa aagaagttaa agaagttaga gtaaatgttt tgttatcggc
301 cttaggcggg tcgggctctc tcatgtgtaa tcaacccgcc cccattgcgt attggtactt
361 atcggatata gaatagatct gcttctcatt gttcctacga accgaattgt tacgttttta
421 ctaaaaaaac aagaatataa caactattaa tcctttctcc gagagaatcc accgaaaagg
481 ggaggtccag agcatcgttt ttccaatgca ataaagttac atagtgtcta tttttcgttg
541 ataaaggggt atttacatgg gtttgccttg gtatcgtgtg cataccgtcg tattgaatga
601 tcctggccgt ttgctggctg tccatataat gcatacagct ttggttgctg gttgggccgg
661 ttcgatggct ttatatgaat tagccgtttt tgatccctct gaccccgttc ttgatccaat
721 gtggagacaa ggtatgttcg ttataccctt catgactcgt ttaggaataa ctaattcatg
781 gggtggttgg agtatcacag ggggaactgt aacgaatccg ggtatttgga gttacgaagg
841 tgtggccggc tcacatattc tgttttctgg cttgtgcttc ttggcagcta tctggcattg
901 ggtgtattgg gatttagcaa tattttctga tgaacgcaca ggaaaacctt ctttagattt
961 gcccaagatc tttggaattc atttatttct ttcagggcta gcttgctttg gttttggcgc
1021 atttcatgta acagggttgt atggtcctgg aatctgggtg tccgatcctt atggactaac
1081 tggagaggta caacctgtaa atccagcatg gggcgtagaa ggttttgatc cttttgttcc
1141 aggaggaata gcctctcatc atattgcagc ggggacttta ggtatattgg cgggtctatt
1201 tcatcttagt gtccgtccgc cccaacgtct ctacaaggga ttgcgtatgg gcaatattga
1261 aaccgtcctt tccagtagta ttgctgctgt cttttttgca gcttttgttg ttgctggaac
1321 tatgtggtat ggttcagcaa ctacccctat tgaattgttt ggtcccaccc gttatcaatg
1381 ggatcaggga tacttccagc aagaaatata tcgaagagtt ggcgcggggc tagccaaaaa
1441 tcaaagctta tcagaagcgt ggtctaaaat tcctgaaaaa ttggcttttt atgattacat
1501 cgggaataat cctgcaaaag ggggattatt cagagcgggt tcaatggaca gcggggatgg
1561 aatagccgtt gggtggttag gacatcctat ctttagagat aaagaggggc gtgaactttt
1621 tgtacgtcgt atgcctactt tttttgaaac atttccggtt gttttggtag acggagacgg
1681 aattgttaga gccgacgttc cttttagaag ggcagaatcg aagtatagtg tggaacaagt
1741 aggtgtaacc atcgagttct atggtggcga actcaatgga gtcagttata gtgaccctgc
1801 tactgttaaa aaatatgcta gacgcgctca attaggtgaa atttttgaat tagatcgcgc
1861 tactttgaaa tcggatggtg tttttcgtag cagtccgaga ggctggttta cttttgggca
1921 tgcttcgttt gctctgctct tcttcttcgg gcacatttgg cacggtgcta gaaccctctt
1981 cagagatgtt tttgctggta ttgacccgga tttggatacg caagtggaat ttggagcatt
2041 ccaaaaactt ggagatccaa ctacaagaag acaagcagtc tgatacagga ttgcatttct
2101 atgttatttt ttttttcttt attttgttga tttcacatag gttaaccgaa aaatcttctt
2161 cgccttttct ttgacccttt ctttttcttt atcggagaga taatctcaaa taaataggta
2221 cggaagttat aattgtaagt aaagcacgat cgaatttatg gaagcattgg tttatacatt
2281 cctcttagtc tccactctag ggatcatttt tttcgctatc ttttttcgag aaccgcctaa
2341 aattcaaact aaaagacgaa atgatttttg attatatcaa ttgaagagcc tcccagcatt
2401 gggaggctca ttacttcaac tagtccccgt gttcctcgaa cggatctctt aattgttgag
2461 agggttgccc aaaagcagta tataaggcat accccgtaaa acttacaagt aaaccagata
2521 tagagatggc gactagggtt gctgtttcca ttattagata atttcaagaa caaaaaaatg
2581 gatctcggaa aaagcgttta tttacaacgg aatggtatac aaagtcaaca gatctcaatt
2641 aatacaaaat aggatgtatg gctacacaaa ctgctgagga gagttctaga gctagaccaa
2701 aaaaaacagg tttagggggg ttattgaaac cattaaattc agaatatggt aaagtagctc
2761 ctgggtgggg aactacccct ttgatgggtc ttgcaatggc tctatttgcg gtattcttat
2821 ctattatttt ggaaatttat aattcttccg ttttattgga cggaatttca atgaattaga
2881 ttcacaataa ccgc
//