GenBank-Updates@genbank.bio.net (05/26/91)
LOCUS TOMU3SNRN 1526 bp ds-DNA PLN 26-MAY-1991
DEFINITION Tomato U3 small nuclear RNA gene
ACCESSION X14411
KEYWORDS U3 small nuclear RNA; pseudogene; small nuclear RNA.
SOURCE Lycopersicon esculentum DNA.
ORGANISM Lycopersicon esculentum
Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida;
Asteridae; Solanales; Solanaceae.
REFERENCE 1 (bases 1 to 1526)
AUTHORS Kiss,T.
JOURNAL Unpublished (1989)
STANDARD full automatic
REFERENCE 2 (bases 1 to 1526)
AUTHORS Kiss,T. and Solymosy,F.
TITLE Molecular analysis of a U3 RNA gene locus in tomato:transcription
signals, the coding region, expression in transgenic tobacco plants
and tandemly repeated pseudogenes.
JOURNAL Nucleic Acids Res. 18, 1941-1949 (1990)
STANDARD full automatic
COMMENT *source: library=lambda Charon 4; clone=U3.1G;
From EMBL entry LEU3SNRN; dated 25-MAY-1990.
FEATURES Location/Qualifiers
misc_feature 424..433
/note="enhancer"
promoter 460..467
/note="TATA-box"
misc_feature 488..703
/note="U3 small nuclear RNA"
repeat_region 704..756
/note="imperfect direct repeat 1"
misc_feature 757..806
/note="U3.1 pseudogene region"
repeat_region 807..844
/note="imperfect direct repeat 1"
misc_feature 845..963
/note="U3.2 pseudogene region"
repeat_region 964..1015
/note="imperfect direct repeat 1"
misc_feature 1016..1127
/note="U3.3 pseudogene region"
repeat_region 1128..1180
/note="imperfect direct repeat 1"
misc_feature 1181..1302
/note="U3.4 pseudogene region"
repeat_region 1303..1366
/note="imperfect direct repeat 1"
BASE COUNT 386 a 309 c 300 g 531 t
ORIGIN
1 cttcaatttt atcccccttt tggaatactt ttgttatctg ttgtttcttg aatgctattg
61 attttatata ctctgagagc attgtgtggc gttcctctga attacttact gtcactttga
121 ttggagccat tattttcaga ctctactgaa gattgaattg aatgagaaac tatgaaactt
181 tacaagtgaa ttattatgga gttcatggca actgctatgg agtttttcct actgggaatt
241 ggaacggttt ctacgaaatt aactgtccac acgttaaaaa tataaattaa tgcgtaattg
301 ttattttttc tataacaaat aaaaaactga aatacgacat aaattttatt actttaattg
361 cactttagcc ttagagatat tgcgttgtag tcggcgtagg tgtgtcaggg gccaatatat
421 tgttcccaca tcggcagtgc agcacataaa ctctagcgtt ataagaatct atccactatc
481 aacggtcacg accttacttg aacaggatct gttctatagg ctcgtaccat tgtatccttg
541 aattctaagg agacaggaat ccaagtctgg ttgatgaagc atggccatgt gaccagagcg
601 tgattaacag ctatccatgg tttctcgagc tgtggttaca gtagatgatc gttcttagac
661 ccttaatctc aggcctaaga tggtctcatg gctgtctgac agactctctc attttttttg
721 ttttcctttt gaacggaagc ccacttctct tcatctgcca tgtgaccaga gcgtgattaa
781 cagctatcca tggtttctcg agctgttgtt ttccttttga acggaagccc acttctcttc
841 atctgccatg tgaccagagc gtgattaaca gctatccatg gtttctcgag ctgtggttac
901 agtagatgat cgttcttaga ccctaatttc agacctaaga tggtctcatg gctgtctgac
961 agactctctc attttttttg ttttcttttg aacggaagcc cacttctctt catctgccat
1021 gtgatcagag cgtgattaac agtcattcat ggctccttga gctgtggttg cagtagatga
1081 tcgttcttac acctgatctc gagcctaaga tggtctcatg gctgtctttt tgttttccat
1141 ttgaacggaa gccaaaaatg gtttccactt ctcttcatct gccatgtgac cagagcgtga
1201 ttaacagtca tccatggctc ctcaagttgt ggttggttgc agtagatgat cgttcttaga
1261 cctgatctca agcctaagat ggtctcatgg ctgtctgaca aactccccca ttctttttgt
1321 tttcctttga acggaagcca aaaatggttt ccacttctct tcatctgcct atttaggaag
1381 tttatgatta gtttggctaa tcaagagcct atggatatcg tcaatttgaa taataaaaga
1441 gttgttcaaa ctttagtctt aactaaaata agtcgtgaat gatactacca tgttggtcaa
1501 ggtcagtaag tatttaccta gtatgt
//