GenBank-Updates@genbank.bio.net (05/26/91)
LOCUS TOBROLBC 3141 bp ds-DNA PLN 26-MAY-1991
DEFINITION Nicotiana glauca rolB-C genes homolog. to TL-DNA of A. rhizogenes
pRiA4b plasmid
ACCESSION X03432
KEYWORDS plasmid; root-inducing plasmid; unidentified reading frame.
SOURCE Nicotiana glauca DNA.
ORGANISM Nicotiana glauca
Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida;
Asteridae; Solanales; Solanaceae.
REFERENCE 1 (bases 1 to 3141)
AUTHORS Furner,I.J., Huffman,G.A., Amasino,R.M., Garfinkel,D.J.,
Gordon,M.P. and Nester,E.W.
TITLE An Agrobacterium transformation in the evolution of the genus
Nicotiana
JOURNAL Nature 319, 422-427 (1986)
STANDARD full automatic
COMMENT SWISS-PROT; P07051; ROLC$NICGL. SWISS-PROT; P09178; ROLB$NICGL.
The indicated sequence represents the left arm of an inverted
repeat structure. The right arm is identical to the left arm bp
1-875 except 11 substitutions and one deletion causing a
frame-shift and a premature stopcodon in reading frame homologous
to rolC.
From EMBL entry NGROLBC; dated 06-JUL-1989.
FEATURES Location/Qualifiers
CDS complement(148..687)
/note="put. rol C protein (aa 1-180)"
/codon_start=687
promoter complement(743..748)
/note="TATA-like sequence"
repeat_region 1361..1512
/note="direct repeat 1"
repeat_region 1513..1714
/note="direct repeat 1"
promoter 2003..2009
/note="TATA-like sequence"
CDS 2060..2692
/note="put. rol B protein (aa 1-259)"
/codon_start=2060
repeat_region 3105..3118
/note="direct repeat 2"
repeat_region 3130..3141
/note="direct repeat 2"
BASE COUNT 876 a 733 c 650 g 882 t
ORIGIN
1 gtcggaaaaa ggacaattgc atcaatggca taggttacat caaaccagat ccatgatgtt
61 tattacattg atttttctag tgggaaaaca agtaaacacc ttcagcccct ctgtacatca
121 gcaccgtcag accagctact tccatcagtt cattccaaat ttgcattcgc catgcctcac
181 ccacgcacca ggttcgagcc taagctggtc gctggcatag aggtcgaagg tcagagactc
241 tccgtttgtc gaagttagct ccatctgctc gtccagcttg gccacgtgcc cagggaaaga
301 aagtgcggcg aagtaagcgc tccggatagg atcctcatat ccgaagaaac ctgatgcctg
361 cctaagccct ctagacactt cacttaaact tacatccttc tggtacggcg gaagattggt
421 gaggagcgcg ccatgcctcg aattgtaggg gaacgacgtt ccatagaagc attgcatcat
481 cgtcgggcag tcgacgtaga ggtacagtat cccagggtct cgggttccac cctcttcgtc
541 aacatccatc gactggttct cacccggctc ggtcaggggg ttccgctcat ctgaggcgct
601 cagaatgtgt ttctttagct catcgctgga cgtcacgtcc ttgaccctga gattgaaaaa
661 gagagcacac aggtcaactt cagccatgtt agcaaagtag gaaacagtag tggcttgtac
721 ccagaactcg aagcaccctt actatttata gatgttattt actgtatatg agttgagtat
781 cgagttaggt atagatgcaa caataatatt aacaaatgat gcgactgtcg atgttccacg
841 tcgcacattt tgttaaatta atatagattg gcactcgcct tcttttaact gggtttatcc
901 gtcagggttt tgcacgttag caaagcacgg gtgggaatag gttctgttgt ccaataatgg
961 tggcatattg tcgatagaat ctctcttttt tcctttaatt atggccgcac ccgcctacct
1021 tttatttatg ctgcgaaaaa gacactactt tttcaagcta aaccccacgt taggcctgtc
1081 agcaccaaag ccacacaggt gtcgcttttc catgggacct catttaaagc acttaacata
1141 gccaccattc attcttctgg ctaagtgcta tttcggcctt attttgattt tttgggctct
1201 aaaacgattg atgggcttca catctaaaac ttgtatcagg atggcatcca tagcaagccc
1261 cgaatagtct gtttgattca cgatgacaat attaaatcgt ataattctaa aacgtatttc
1321 tgattaaacg ctataaataa tttacattta ttggcaagcg tatttggcgt gattgaataa
1381 ttactatatg ttgccgaaat atagcacgtg tagaaaaggt gttaattaat atttgcagca
1441 ataatttaca tcttaatcat aaaataaaaa agcatcgtga ctgcggccat caaacacgtt
1501 tgccaatgca gctatttggc gtgattgaat aattactata tgttgccgga atatagcacg
1561 tgtagttggc gtgattgaat aattactata tgttgccgga atatagcacg tgtagaaaag
1621 gtgttaatta atatttgcag caataattta catcttaatc atgaaataaa aaagcatcgt
1681 gactgcggcc atcaaacacg tttgccaatg cagcttttca cgaaactcaa tagccggcca
1741 actttaagct cttaccccac ccctccccat tatgggcatc ttttagaaat cctttcacta
1801 aagccaaaca aaaaagacag aaaaagaaag cccactacga agaacccgtg aacgatcaag
1861 catgcagtat tttcacttga tccagatttt agggactcca tgtcttgagc atcaattttg
1921 atgggatggt aattattgcc agattgcccc tggctttccc gaccagagat tgtgtctgat
1981 tggcgccact ttccggtgcc catattttaa atggcactgg aacttgccat tgtttcacac
2041 ttgtccaact cacattacaa tggcttccca atcgcaattc catccacgct ttcaaccacg
2101 aaacctcact ccagctggga agcagatcaa tttatccaag gagatccaat ctgcttttat
2161 gacctatagc gaagtctata gcaaaaccct gctagattac cagaaacggt gggctgatgt
2221 catctttgat ttggaggaaa aatctctacg gatggatatc cttaaacaac tggctgagct
2281 tctaaagaac aaaatctgct atcatcctcc tatgtttgtt gagcaaccag atttggctcg
2341 agaaagggac caacgtgtat ttatctatct ttctcgtgag aagatgcaga aagtgctgga
2401 ggaacaatcc attacggttg gaatggaggc cgtgctggcg acaacgatcc aaccataccg
2461 gagcgacctc gccgtccaag agatgctccg tgtccacaac cgtgcctggc cgcaccgccg
2521 gatggaagaa cgtgatttgg aatgcttcat tgctattttc gcaagtacct tgttcattca
2581 cctgacgacg ctaaaagtca ccaaccttta tgggagagag gtagattgca ccttctttgt
2641 tcggcgagcg tctacaaacc gtccctatga cgttgtagct ttcggcacta catagttcag
2701 cgaaaatgcc cttgtgatac cacgtctggc ggcaccgtct ccggagccgg acctaaccct
2761 gcgactctgg gggcttgacc agtaaagcga ggaaggcgtc atgaagtctg ctatagtaaa
2821 cctgaagaaa gaagcctaag ccggcttgag ctcccctgca ggccaccttt atctatttgt
2881 ttgtcatagt ttctatgttt ttctcgcgta gcctgcgatc cccttgggag ttgtagcgta
2941 caccgtaatg tgcttgacct gtttcttgta ataaatattt tcacaacgtt aattctgcgg
3001 ctgatttttc agaaacagtg catatcatat aaataactta tagacgattc atccatataa
3061 aaacaaactg ctaatacact tgactttaag attgtcacaa cgttacatct taacaaacga
3121 tattttcaga cattacaaaa c
//