GenBank-Updates@genbank.bio.net (05/26/91)
LOCUS TOBROLBC 3141 bp ds-DNA PLN 26-MAY-1991 DEFINITION Nicotiana glauca rolB-C genes homolog. to TL-DNA of A. rhizogenes pRiA4b plasmid ACCESSION X03432 KEYWORDS plasmid; root-inducing plasmid; unidentified reading frame. SOURCE Nicotiana glauca DNA. ORGANISM Nicotiana glauca Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; Asteridae; Solanales; Solanaceae. REFERENCE 1 (bases 1 to 3141) AUTHORS Furner,I.J., Huffman,G.A., Amasino,R.M., Garfinkel,D.J., Gordon,M.P. and Nester,E.W. TITLE An Agrobacterium transformation in the evolution of the genus Nicotiana JOURNAL Nature 319, 422-427 (1986) STANDARD full automatic COMMENT SWISS-PROT; P07051; ROLC$NICGL. SWISS-PROT; P09178; ROLB$NICGL. The indicated sequence represents the left arm of an inverted repeat structure. The right arm is identical to the left arm bp 1-875 except 11 substitutions and one deletion causing a frame-shift and a premature stopcodon in reading frame homologous to rolC. From EMBL entry NGROLBC; dated 06-JUL-1989. FEATURES Location/Qualifiers CDS complement(148..687) /note="put. rol C protein (aa 1-180)" /codon_start=687 promoter complement(743..748) /note="TATA-like sequence" repeat_region 1361..1512 /note="direct repeat 1" repeat_region 1513..1714 /note="direct repeat 1" promoter 2003..2009 /note="TATA-like sequence" CDS 2060..2692 /note="put. rol B protein (aa 1-259)" /codon_start=2060 repeat_region 3105..3118 /note="direct repeat 2" repeat_region 3130..3141 /note="direct repeat 2" BASE COUNT 876 a 733 c 650 g 882 t ORIGIN 1 gtcggaaaaa ggacaattgc atcaatggca taggttacat caaaccagat ccatgatgtt 61 tattacattg atttttctag tgggaaaaca agtaaacacc ttcagcccct ctgtacatca 121 gcaccgtcag accagctact tccatcagtt cattccaaat ttgcattcgc catgcctcac 181 ccacgcacca ggttcgagcc taagctggtc gctggcatag aggtcgaagg tcagagactc 241 tccgtttgtc gaagttagct ccatctgctc gtccagcttg gccacgtgcc cagggaaaga 301 aagtgcggcg aagtaagcgc tccggatagg atcctcatat ccgaagaaac ctgatgcctg 361 cctaagccct ctagacactt cacttaaact tacatccttc tggtacggcg gaagattggt 421 gaggagcgcg ccatgcctcg aattgtaggg gaacgacgtt ccatagaagc attgcatcat 481 cgtcgggcag tcgacgtaga ggtacagtat cccagggtct cgggttccac cctcttcgtc 541 aacatccatc gactggttct cacccggctc ggtcaggggg ttccgctcat ctgaggcgct 601 cagaatgtgt ttctttagct catcgctgga cgtcacgtcc ttgaccctga gattgaaaaa 661 gagagcacac aggtcaactt cagccatgtt agcaaagtag gaaacagtag tggcttgtac 721 ccagaactcg aagcaccctt actatttata gatgttattt actgtatatg agttgagtat 781 cgagttaggt atagatgcaa caataatatt aacaaatgat gcgactgtcg atgttccacg 841 tcgcacattt tgttaaatta atatagattg gcactcgcct tcttttaact gggtttatcc 901 gtcagggttt tgcacgttag caaagcacgg gtgggaatag gttctgttgt ccaataatgg 961 tggcatattg tcgatagaat ctctcttttt tcctttaatt atggccgcac ccgcctacct 1021 tttatttatg ctgcgaaaaa gacactactt tttcaagcta aaccccacgt taggcctgtc 1081 agcaccaaag ccacacaggt gtcgcttttc catgggacct catttaaagc acttaacata 1141 gccaccattc attcttctgg ctaagtgcta tttcggcctt attttgattt tttgggctct 1201 aaaacgattg atgggcttca catctaaaac ttgtatcagg atggcatcca tagcaagccc 1261 cgaatagtct gtttgattca cgatgacaat attaaatcgt ataattctaa aacgtatttc 1321 tgattaaacg ctataaataa tttacattta ttggcaagcg tatttggcgt gattgaataa 1381 ttactatatg ttgccgaaat atagcacgtg tagaaaaggt gttaattaat atttgcagca 1441 ataatttaca tcttaatcat aaaataaaaa agcatcgtga ctgcggccat caaacacgtt 1501 tgccaatgca gctatttggc gtgattgaat aattactata tgttgccgga atatagcacg 1561 tgtagttggc gtgattgaat aattactata tgttgccgga atatagcacg tgtagaaaag 1621 gtgttaatta atatttgcag caataattta catcttaatc atgaaataaa aaagcatcgt 1681 gactgcggcc atcaaacacg tttgccaatg cagcttttca cgaaactcaa tagccggcca 1741 actttaagct cttaccccac ccctccccat tatgggcatc ttttagaaat cctttcacta 1801 aagccaaaca aaaaagacag aaaaagaaag cccactacga agaacccgtg aacgatcaag 1861 catgcagtat tttcacttga tccagatttt agggactcca tgtcttgagc atcaattttg 1921 atgggatggt aattattgcc agattgcccc tggctttccc gaccagagat tgtgtctgat 1981 tggcgccact ttccggtgcc catattttaa atggcactgg aacttgccat tgtttcacac 2041 ttgtccaact cacattacaa tggcttccca atcgcaattc catccacgct ttcaaccacg 2101 aaacctcact ccagctggga agcagatcaa tttatccaag gagatccaat ctgcttttat 2161 gacctatagc gaagtctata gcaaaaccct gctagattac cagaaacggt gggctgatgt 2221 catctttgat ttggaggaaa aatctctacg gatggatatc cttaaacaac tggctgagct 2281 tctaaagaac aaaatctgct atcatcctcc tatgtttgtt gagcaaccag atttggctcg 2341 agaaagggac caacgtgtat ttatctatct ttctcgtgag aagatgcaga aagtgctgga 2401 ggaacaatcc attacggttg gaatggaggc cgtgctggcg acaacgatcc aaccataccg 2461 gagcgacctc gccgtccaag agatgctccg tgtccacaac cgtgcctggc cgcaccgccg 2521 gatggaagaa cgtgatttgg aatgcttcat tgctattttc gcaagtacct tgttcattca 2581 cctgacgacg ctaaaagtca ccaaccttta tgggagagag gtagattgca ccttctttgt 2641 tcggcgagcg tctacaaacc gtccctatga cgttgtagct ttcggcacta catagttcag 2701 cgaaaatgcc cttgtgatac cacgtctggc ggcaccgtct ccggagccgg acctaaccct 2761 gcgactctgg gggcttgacc agtaaagcga ggaaggcgtc atgaagtctg ctatagtaaa 2821 cctgaagaaa gaagcctaag ccggcttgag ctcccctgca ggccaccttt atctatttgt 2881 ttgtcatagt ttctatgttt ttctcgcgta gcctgcgatc cccttgggag ttgtagcgta 2941 caccgtaatg tgcttgacct gtttcttgta ataaatattt tcacaacgtt aattctgcgg 3001 ctgatttttc agaaacagtg catatcatat aaataactta tagacgattc atccatataa 3061 aaacaaactg ctaatacact tgactttaag attgtcacaa cgttacatct taacaaacga 3121 tattttcaga cattacaaaa c //