GenBank-Updates@genbank.bio.net (05/26/91)
LOCUS TOMEF1A 4565 bp ds-DNA PLN 26-MAY-1991
DEFINITION L.esculentum gene for elongation factor 1-alpha
ACCESSION X53043
KEYWORDS elongation factor; elongation factor 1; elongation factor 1-alpha.
SOURCE Lycopersicon esculentum DNA.
ORGANISM Lycopersicon esculentum
Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida;
Asteridae; Solanales; Solanaceae.
REFERENCE 1 (bases 1 to 4565)
AUTHORS Rose,R.E.
JOURNAL Unpublished (1990)
STANDARD full automatic
REFERENCE 2 (bases 1 to 4565)
AUTHORS Shewmaker,C.K., Ridge,N.P., Pokalsky,A.R., Rose,R.E. and Hiatt,W.R.
TITLE Nucleotide sequence of an EF-1-alpha genomic clone from tomato
JOURNAL Nucleic Acids Res. 18, 4276-4276 (1990)
STANDARD full automatic
COMMENT SWISS-PROT; P17786; EF1A$LYCES.
*source: strain=cv. VFNT cherry; library=CH35-Sau 3A partial;
*source: clone=LeEF-A; See <X14449> for elongation factor for
tomato strain caligrande.
From EMBL entry LEEF1A; dated 15-AUG-1990.
FEATURES Location/Qualifiers
mRNA <1680..1679
/note="exon 1"
intron 1680..2436
/note="intron I"
mRNA 2437..2915
/note="exon 2"
CDS 2454..2915
/note="elongation factor 1-alpha (AA 1 - 154)"
/codon_start=2454
intron 2916..2995
/note="intron 2"
mRNA 2996..3877
/note="exon 3"
CDS 2996..3877
/note="elongation factor 1-alpha (AA 155 - 448)"
/codon_start=2996
BASE COUNT 1310 a 720 c 819 g 1716 t
ORIGIN
1 atgtgtgtta tattaggtct tagacgaaat tcattcccaa aaggtagatc aaatagagga
61 ggattgtcca aatattataa gaagtcactc atttcattaa tcatcgatgt agaatttttt
121 tcattcttta acaccctata tcacgtcaag tgcttagcat gttgtgtatg gacaattttg
181 actttaagag ccccaacatt gcacacttta ccttcttttt ttttgaaaaa attaacaaca
241 attttttttt cctacttatt caataccttg ttcaataata aagaactaag atagtacgaa
301 gagaatttta ttattttgtc tagcaattaa taataataaa taataatgta acaaacattt
361 ctatgaaata tatattattc tcttttccaa gcaaaattaa aaaatgataa ccaacaattt
421 aaaaacttat cctacaatat aagttcataa aaaaataatt agcttgccaa ttggcttaac
481 cagattgcaa ttatatatat atatataata ataataataa taataataat aataaatatt
541 tttaactttt tctcaacaaa aaaaatactg ttgctgcttt cagtttaaat cagttttaag
601 agtttacgaa aaatttaatt atttaaagta agtatatttt tcaataacaa tgccaaaacc
661 tctaatattc ttaaatttaa caattgccaa gtgattttta gttagtttgc tattactatt
721 gttgttatcc ttactactag cattattact attaattaat tattattatt atcatcacta
781 tcattattag taaaaggttt tttttatgtt tgtatctttt aatttaatat ttaaattaaa
841 tacatttaca tttattttgc aatatttaaa aatgattagt ttgtcaaata gtagagttca
901 tttaaaattc ttcagccata tagttctatt tttaagctag tcgacttttt ttttcttact
961 gaaaattaat atttttttct ttttgaaata ctaatacatc taaatttaac aattgccaaa
1021 gtgattttta attagcttgc tggctaatca caatacaaat tactctcctt tactatataa
1081 gtaaattttt attgctatat ttgttattat tattattatt aatatttatt ttctacaaat
1141 ttaacaatat tttattttat atcattttaa aaagataagt aatgaaatat taagaattcg
1201 tttagaattc ttttgcaggt gggtttctat ttgtaagcta atctttttca gttatctttt
1261 ttttttaatc tttattatta ttatagctat atctttttct tttaaaatta acattatcta
1321 ttaaagataa tttcaataaa agagtaaaaa ttaatttaga gttctacttt cttcaaattt
1381 ctattttaaa aaatactttt aaaacttgat gtattttttt acgtggtttt tcactatgac
1441 ttgatttctg ttttattata atatgtataa atataaaaat agatattcca taacatatta
1501 taaaaaatgt aaggggcatt tacgtaaata gatagactta aaagaggcac cgagtgaacc
1561 ctaattctca tcgttgagac tataaaatgc ccattatccc attcgcattg tctcttcatt
1621 acttttgctg tgatttctcc tcagctgtgc cgcatatcgc ctaatttttc ttctctaagg
1681 tttcatcatc ttcaccaatt tctttaatct cgattcaatt ttttatgttt gatctgttat
1741 tgttctgtca ctacatgtgt ttttcagttg ttttactaga tgattttcac tgtcttcttg
1801 ttagatcata catatattga aaatgttttg gattgacttt tttgtattgt gaatatctgt
1861 tattgtttga tagttgttca gtatttacac agccgatctg tgttatgagc ttggtcataa
1921 ctatttctct gtatgtaaat acagatctgt taatgtttgt aatcaatttt tcatatgcac
1981 tgttgatatt gttctctctc ctgtcctgtt atatgttgat atgattcggt ttttgtataa
2041 cttgaactaa acactagtcc taaatgtttt ttttactatt taagatttat ataatatgga
2101 tagatttgtt gagttcctag tctctgaaga ggttaagctt gctgtagttg tttaccagtt
2161 gagttgcaat actaaaaatc aattcaatta ctgatatttt ttgctgttta ggtttttgac
2221 gaagtacttt aatttgcttt attgaactaa aaacgtagtc ctgaattcat tgcaagtgtg
2281 aaagctatag ttcattgttt ttgttgcaat tcttgaaaaa tcaattggtc aagctataat
2341 ggatttactt tttctgtttt aaatgttgaa tgcgctgaat ttatgaatgg gttgcatggt
2401 ttttgaaata tgttgttgtg tgttgtgtaa atgcagtttc ttagtgtctc aagatgggta
2461 aagagaagat tcacatcagc attgtggtca ttggtcatgt tgactctgga aagtcgacta
2521 ccactggtca cttgatctac aagcttggtg gtattgacaa gcgtgttatt gagaggttcg
2581 agaaggaagc tgctgagatg aacaagaggt cattcaagta tgcctgggtg cttgacaaac
2641 ttaaggcaga acgtgagcgt ggtatcacca ttgatattgc tttgtggaag tttgagacca
2701 ctaagtacta ctgcactgtt attgatgccc ccggccacag ggatttcatc aagaacatga
2761 tcactggtac ctctcaggct gactgtgctg ttctcattat tgactccact actggtggtt
2821 ttgaagctgg tatctccaaa gatggtcaga cccgtgaaca tgcattgctt gctttcaccc
2881 ttggtgtcaa gcaaatgatc tgctgctgta acaaggtttg ctttaattcg tagatggaat
2941 taattgttaa tttaagctgt acatgtcatg ctaattctgt tattattttt tgtagatgga
3001 tgctaccacc cccaagtact ccaaggctag gtatgatgaa atcgtgaagg aagtttcttc
3061 ctacctcaag aaggttggtt acaaccctga caaaatcccc tttgttccaa tctctggttt
3121 tgaaggagac aacatgattg agaggtctac caacctcgac tggtacaagg gaccaaccct
3181 ccttgaggct cttgaccaga ttaacgagcc caagaggcca tcagacaaac ccctccgtct
3241 tccacttcag gatgtttaca agattggtgg tattggaact gtccctgttg gtcgcgttga
3301 gactggtgtg atcaagcctg gtatggttgt gacctttggc cctactggtt tgacaactga
3361 agtcaagtct gttgagatgc accacgaagc tctccaggag gcactccctg gtgacaatgt
3421 tgggttcaat gttaagaatg ttgctgttaa ggatcttaag cgtggttatg ttgcctcaaa
3481 ctccaaggat gacccagcca agggggcagc cagcttcact gcccaggtca tcatcatgaa
3541 ccatcctggc cagattggaa atggatatgc tccagtgctt gattgtcaca cttcccacat
3601 tgctgtcaag tttgctgaga tcttgaccaa gattgacagg cgttcaggta aggaacttga
3661 gaaggagcct aagttcttga agaacggtga tgctggtatg gttaagatga ttcccaccaa
3721 gcccatggtt gttgagacct ttgctgaata ccctccattg ggtcgttttg ctgtgaggga
3781 catgaggcag actgttgctg ttggtgttgt caagaatgtt gacaagaagg acccaactgg
3841 tgccaaggtg accaaggctg cccagaagaa ggggaagtga actgtgcagt gtgatgctgg
3901 tgtttcgaat gctatttatt tacatcgagt gtgctatcta gactctgttt tatttaattc
3961 tgctttagtt tggtctttga gttgtgtatt aggttgtggt tctctgactt gtctgtcaag
4021 tatccattct cagaactggg tacttgatag gcggtggcga gcatgatttt gagtctgtta
4081 tcatttgctt ttgttgaggt gccttggttt gttttccatg gtggctcggg atttttgttg
4141 ctttaatttg agatttaagt tttctactca ttacgttaca tttaagttaa catgttacct
4201 ttgctaaagg gtggtgattt ggttattaat agctcagttg tataatggtg catcaaattc
4261 tgcctgtagg atttgttgca atttttatgc tactgtgctg acttcctaat gcactataac
4321 atgagtgatt ttgtacatgg taacttgaaa tggtgaattg aggcagagtg acaaccaagt
4381 cgcctggtca accccgcact ggggatgaca accatgtgat tttgtacgtg ataattcgaa
4441 atggtgaagt gaggtagaac ttgcaccaga tggcagccag tgtattcata aaaccatatc
4501 aaagttgcta tgaacatttt actaattctc attattcttg atttttgatg agatggagaa
4561 gatcc
//