GenBank-Updates@genbank.bio.net (05/26/91)
LOCUS MZEWAXZ 4800 bp ds-DNA PLN 26-MAY-1991
DEFINITION Zea mays waxy (wx+) locus for UDP-glucose starch glycosyl
transferase
ACCESSION X03935
KEYWORDS UDP-glucose starch glycosyl transferase; glycosyl transferase;
transit peptide; waxy locus.
SOURCE Zea mays DNA.
ORGANISM Zea mays
Eukaryota; Plantae; Embryobionta; Magnoliophyta; Liliopsida;
Commelinidae; Cyperales; Poaceae.
REFERENCE 1 (bases 1 to 4800)
AUTHORS Kloesgen,R.B., Gierl,A., Schwarz-Sommer,Z. and Saedler,H.
TITLE Molecular analysis of the waxy locus of Zea mays
JOURNAL Mol. Gen. Genet. 203, 237-244 (1986)
STANDARD full automatic
COMMENT EPD; 14012; Zm[waxy] ADPg-s GT. SWISS-PROT; P04713; UGST$MAIZE.
From EMBL entry ZMWAXY; dated 18-NOV-1986.
FEATURES Location/Qualifiers
repeat_region 283..287
/note="direct repeat 1"
repeat_region 288..292
/note="direct repeat 1"
repeat_region 293..297
/note="direct repeat 1"
repeat_region 298..302
/note="direct repeat 1"
misc_feature 372..385
/note="GC stretch (pot. regulatory factor binding site)"
misc_feature 442..468
/note="GC stretch (pot. regulatory factor binding site)"
misc_feature 768..782
/note="GC stretch (pot. regulatory factor binding site)"
misc_feature 810..822
/note="GC stretch (pot. regulatory factor binding site)"
promoter 821..828
/note="CAAT box-like sequence"
misc_feature 821..828
/note="target duplication site (Ac7)"
promoter 867..873
/note="TATA box-like sequence"
misc_feature 887..900
/note="GC stretch (pot. regulatory factor binding site)"
mRNA 901..1080
/note="exon 1"
misc_feature 901..901
/note="transcriptional start site"
intron 1081..1219
/note="intron I"
mRNA 1220..1553
/note="exon 2"
CDS 1233..1448
/note="transit peptide (aa 1-72)"
/codon_start=1233
CDS 1449..1553
/note="mature transferase (aa 1-35)"
/codon_start=1449
intron 1554..1684
/note="intron II"
mRNA 1685..1765
/note="exon 3"
CDS 1685..1765
/note="mature transferase (aa 36-62)"
/codon_start=1685
intron 1766..1859
/note="intron III"
mRNA 1860..1958
/note="exon 4"
CDS 1860..1958
/note="mature transferase (aa 63-95)"
/codon_start=1860
intron 1959..2054
/note="intron IV"
mRNA 2055..2144
/note="exon 5"
CDS 2055..2144
/note="mature transferase (aa 96-125)"
/codon_start=2055
intron 2145..2225
/note="intron V"
mRNA 2226..2289
/note="exon 6"
CDS 2226..2289
/note="mature transferase (aa 126-146) (2289 is 1st base
in codon)"
/codon_start=2226
intron 2290..2412
/note="intron VI"
mRNA 2413..2513
/note="exon 7"
CDS 2413..2513
/note="mature transferase (aa 147-180) (2413 is 2nd base
in codon)"
/codon_start=2413
intron 2514..2650
/note="intron VII"
misc_feature 2564..2566
/note="target duplication site (En1)"
mRNA 2651..2760
/note="exon 8"
CDS 2651..2760
/note="mature transferase (aa 181-217) (2760 is 2nd base
in codon)"
/codon_start=2651
intron 2761..2857
/note="intron VIII"
mRNA 2858..3101
/note="exon 9"
CDS 2858..3101
/note="mature transferase (aa 218-300)"
/codon_start=2858
intron 3102..3211
/note="intron IX"
mRNA 3212..3394
/note="exon 10"
CDS 3212..3394
/note="mature transferase (aa 301-361)"
/codon_start=3212
misc_feature 3358..3365
/note="target duplication site (Ac9)"
intron 3395..3489
/note="intron X"
mRNA 3490..3681
/note="exon 11"
CDS 3490..3681
/note="mature transferase (aa 362-425)"
/codon_start=3490
misc_feature 3570..3572
/note="target duplication site (Spm 18)"
intron 3682..3792
/note="intron XI"
mRNA 3793..3879
/note="exon 12"
CDS 3793..3879
/note="mature transferase (aa 426-449)"
/codon_start=3793
intron 3880..3976
/note="intron XII"
mRNA 3977..4105
/note="exon 13"
CDS 3977..4105
/note="mature transferase (exon 13) (aa 450-492)"
/codon_start=3977
intron 4106..4226
/note="intron XIII"
mRNA 4227..4595
/note="exon 14"
CDS 4227..4340
/note="mature transferase (aa 493-530)"
/codon_start=4227
misc_feature 4570..4575
/note="polyadenylation signal 1 (line C)"
misc_feature 4593..4598
/note="polyadenylation signal 2 (line C)"
polyA_site 4595..4595
/note="polyadenylation site 1 (line C)"
misc_feature 4597..4602
/note="polyadenylation signal (m8 Rev)"
polyA_site 4618..4618
/note="polyadenylation site 2 (line C)"
polyA_site 4625..4625
/note="polyadenylation site (m8 Rev)"
BASE COUNT 935 a 1413 c 1447 g 1005 t
ORIGIN
1 cagcgaccta ttacacagcc cgctcgggcc cgcgacgtcg ggacacatct tcttccccct
61 tttggtgaag ctctgctcgc agctgtccgg ctccttggac gttcgtgtgg cagattcatc
121 tgttgtctcg tctcctgtgc ttcctgggta gcttgtgtag tggagctgac atggtctgag
181 caggcttaaa atttgctcgt agacgaggag taccagcaca gcacgttgcg gatttctctg
241 cctgtgaagt gcaacgtcta ggattgtcac acgccttggt cgcgtcgcgt cgcgtcgcgt
301 cgatgcggtg gtgagcagag cagcaacagc tgggcggccc aacgttggct tccgtgtctt
361 cgtcgtacgt acgcgcgcgc cggggacacg cagcagagag cggagagcga gccgtgcacg
421 gggaggtggt gtggaagtgg agccgcgcgc ccggccgccc gcgcccggtg ggcaacccaa
481 aagtacccac gacaagcgaa ggcgccaaag cgatccaagc tccggaacgc aacagcatgc
541 gtcgcgtcgg agagccagcc acaagcagcc gagaaccgaa ccggtgggcg acgcgtcatg
601 ggacggacgc gggcgacgct tccaaacggg ccacgtacgc cggcgtgtgc gtgcgtgcag
661 acgacaagcc aaggcgaggc agcccccgat cgggaaagcg ttttgggcgc gagcgctggc
721 gtgcgggtca gtcgctggtg cgcagtgccg gggggaacgg gtatcgtggg gggcgcgggc
781 ggaggagagc gtggcgaggg ccgagagcag cgcgcggccg ggtcacgcaa cgcgccccac
841 gtactgccct ccccctccgc gcgcgctaga aataccgagg cctggaccgg gggggggccc
901 cgtcacatcc atccatcgac cgatcgatcg ccacagccaa caccacccgc cgaggcgacg
961 cgacagccgc caggaggaag gaataaactc actgccagcc agtgaagggg gagaagtgta
1021 ctgctccgtc gaccagtgcg cgcaccgccc ggcagggctg ctcatctcgt cgacgaccag
1081 gttctgttcc gttccgatcc gatccgatcc tgtccttgag tttcgtccag atcctggcgc
1141 gtatctgcgt gtttgatgat ccaggttctt cgaacctaaa tctgtccgtg cacacgtctt
1201 ttctctctct cctacgcagt ggattaatcg gcatggcggc tctggccacg tcgcagctcg
1261 tcgcaacgcg cgccggcctg ggcgtcccgg acgcgtccac gttccgccgc ggcgccgcgc
1321 agggcctgag gggggcccgg gcgtcggcgg cggcggacac gctcagcatg cggaccagcg
1381 cgcgcgcggc gcccaggcac cagcagcagg cgcgccgcgg gggcaggttc ccgtcgctcg
1441 tcgtgtgcgc cagcgccggc atgaacgtcg tcttcgtcgg cgccgagatg gcgccgtgga
1501 gcaagaccgg cggcctcggc gacgtcctcg gcggcctgcc gccggccatg gccgtaagcg
1561 cgcgcaccga gacatgcatc cgttggatcg cgtcttcttc gtgctcttgc cgcgtgcatg
1621 atgcatgtgt ttcctcctgg cttgtgttcg tgtatgtgac gtgtttgttc gggcatgcat
1681 gcaggcgaac gggcaccgtg tcatggtcgt ctctccccgc tacgaccagt acaaggacgc
1741 ctgggacacc agcgtcgtgt ccgaggtacg gccaccgaga ccagattcag atcacagtca
1801 cacacaccgt catatgaacc tttctctgct ctgatgcctg caactgcaaa tgcatgcaga
1861 tcaagatggg agacgggtac gagacggtca ggttcttcca ctgctacaag cgcggagtgg
1921 accgcgtgtt cgttgaccac ccactgttcc tggagagggt gagacgagat ctgatcactc
1981 gatacgcaat taccacccca ttgtaagcag ttacagtgag ctttttttcc ccccggcctg
2041 gtcgctggtt tcaggtttgg ggaaagaccg aggagaagat ctacgggcct gtcgctggaa
2101 cggactacag ggacaaccag ctgcggttca gcctgctatg ccaggtcagg atggcttggt
2161 actacaactt catatcatct gtatgcagca gtatacactg atgagaaatg catgctgttc
2221 tgcaggcagc acttgaagct ccaaggatcc tgagcctcaa caacaaccca tacttctccg
2281 gaccatacgg taagagttgc agtcttcgta tatatatctg ttgagctcga gaatcttcac
2341 aggaagcggc ccatcagacg gactgtcatt ttacactgac tactgctgct gctcttcgtc
2401 catccataca aggggaggac gtcgtgttcg tctgcaacga ctggcacacc ggccctctct
2461 cgtgctacct caagagcaac taccagtccc acggcatcta cagggacgca aaggttgcct
2521 tctctgaact gaacaacgcc gttttcgttc tccatgctcg tatatacctc gtctggtagt
2581 ggtggtgctt ctctgagaaa ctaactgaaa ctgactgcat gtctgtctga ccatcttcac
2641 gtactaccag accgctttct gcatccacaa catctcctac cagggccggt tcgccttctc
2701 cgactacccg gagctgaacc tcccggagag attcaagtcg tccttcgatt tcatcgacgg
2761 gtctgttttc ctgcgtgcat gtgaacattc atgaatggta acccacaact gttcgcgtcc
2821 tgctggttca ttatctgacc tgattgcatt attgcagcta cgagaagccc gtggaaggcc
2881 ggaagatcaa ctggatgaag gccgggatcc tcgaggccga cagggtcctc accgtcagcc
2941 cctactacgc cgaggagctc atctccggca tcgccagggg ctgcgagctc gacaacatca
3001 tgcgcctcac cggcatcacc ggcatcgtca acggcatgga cgtcagcgag tgggacccca
3061 gcagggacaa gtacatcgcc gtgaagtacg acgtgtcgac ggtgagctgg ctagctctga
3121 ttctgctgcc tggtcctcct gctcatcatg ctggttcggt actgacgcgg caagtgtacg
3181 tacgtgcgtg cgacggtggt gtccggttca ggccgtggag gccaaggcgc tgaacaagga
3241 ggcgctgcag gcggaggtcg ggctcccggt ggaccggaac atcccgctgg tggcgttcat
3301 cggcaggctg gaagagcaga agggccccga cgtcatggcg gccgccatcc cgcagctcat
3361 ggagatggtg gaggacgtgc agatcgttct gctggtacgt gtgcgccggc cgccacccgg
3421 ctactacatg cgtgtatcgt tcgttctact ggaacatgcg tgtgagcaac gcgatggata
3481 atgctgcagg gcacgggcaa gaagaagttc gagcgcatgc tcatgagcgc cgaggagaag
3541 ttcccaggca aggtgcgcgc cgtggtcaag ttcaacgcgg cgctggcgca ccacatcatg
3601 gccggcgccg acgtgctcgc cgtcaccagc cgcttcgagc cctgcggcct catccagctg
3661 caggggatgc gatacggaac ggtacgagag aaaaaaaaaa tcctgaatcc tgacgagagg
3721 gacagagaca gattatgaat gcttcatcga tttgaattga ttgatcgatg tctcccgctg
3781 cgactcttgc agccctgcgc ctgcgcgtcc accggtggac tcgtcgacac catcatcgaa
3841 ggcaagaccg ggttccacat gggccgcctc agcgtcgacg taagcctagc tctgccatgt
3901 tctttcttct ttctttctgt atgtatgtat gaatcagcac cgccgttctt gtttcgtcgt
3961 cgtcctctct tcccagtgta acgtcgtgga gccggcggac gtcaagaagg tggccaccac
4021 attgcagcgc gccatcaagg tggtcggcac gccggcgtac gaggagatgg tgaggaactg
4081 catgatccag gatctctcct ggaaggtacg tacgcccgcc ccgccccgcc ccgccagagc
4141 agagcgccaa gatcgaccga tcgaccgacc acacgtacgc gcctcgctcc tgtcgctgac
4201 cgtggtttaa tttgcgaaat gcgcagggcc ctgccaagaa ctgggagaac gtgctgctca
4261 gcctcggggt cgccggcggc gagccagggg tcgaaggcga ggagatcgcg ccgctcgcca
4321 aggagaacgt ggccgcgccc tgaagagttc ggcctgcagg gcccctgatc tcgcgcgtgg
4381 tgcaaagatg ttgggacatc ttcttatata tgctgtttcg tttatgtgat atggacaagt
4441 atgtgtagct gcttgcttgt gctagtgtaa tgtagtgtag tggtggccag tggcacaacc
4501 taataagcgc atgaactaat tgcttgcgtg tgtagttaag taccgatcgg taattttata
4561 ttgcgagtaa ataaatggac ctgtagtggt ggagtaaata atccctgctg ttcggtgttc
4621 ttatcgctcc tcgtatagat attatataga gtacattttt ctctctctga atcctacgtt
4681 tgtgaaattt ctatatcatt actgtaaaat ttctgcgttc caaaagagac catagcctat
4741 ctttggccct gtttgtttcg gcttctggca gcttctggcc accaaaagct gctgcggact
//