GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS RHMNIFPRE 2076 bp ds-DNA BCT 27-MAY-1991 DEFINITION Rhizobium leguminosarum fixX (partial), nifA, and nifB (partial) genes ACCESSION X17073 KEYWORDS fixX gene; nifA gene; nifA regulatory protein; nifB gene; regulatory protein. SOURCE Rhizobium leguminosarum DNA. ORGANISM Rhizobium leguminosarum Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Rhizobiaceae. REFERENCE 1 (bases 1 to 2076) AUTHORS Roelvink,P.W. JOURNAL Unpublished (1989) STANDARD full automatic REFERENCE 2 (bases 1 to 2076) AUTHORS Roelvink,P.W., Hontelez,J.G., van,K.A. and van,d.B.R.C. TITLE Nucleotide sequence of the regulatory nifA gene of Rhizobium leguminosarum PRE: transcriptional control sites and expression in Escherichia coli JOURNAL Mol. Microbiol. 3, 1441-1447 (1989) STANDARD full automatic COMMENT *source: strain=PRE; Data kindly reviewed (19-JUL-1990) by Roelvink P.W. From EMBL entry RLNIFPRE; dated 25-SEP-1990. FEATURES Location/Qualifiers CDS <1..32 /note="fixX protein (10 AA) (1 is 2nd base in codon)" /codon_start=1 promoter 133..155 /note="promoter" RBS 225..229 /note="ribosome binding site" CDS 231..1787 /note="nifA regulatory protein (AA 1-519)" /codon_start=231 terminator 1820..1856 /note="nifA transcription terminator" RBS 1976..1980 /note="ribosome binding site" CDS 1987..>2076 /note="nifB protein (AA 1-30)" /codon_start=1987 BASE COUNT 503 a 554 c 574 g 445 t ORIGIN 1 cccggggagg gttcggggtc ctcaaattcg gatgaggacg tccctacctc cggcgggata 61 gcagcgatcg atccagctgc attagcggcg gcgattgaat gtgcatcttc taacctttcg 121 aaaggctaat ttttgcgccg tcgatagcac gtatttctaa cctaggaata tgcgttagca 181 tatttcgcgt accagggtaa aaagcagtgc accctccctt gtttgtaggc atgattaaac 241 cagaggcgcg gctccatatt ctctacgaca tctccaaaga gcttatctct tcttttcctc 301 tagacaactt gctgaaggct gccatgaacg ccctcgtcga gcatctgcga ttgcgcgacg 361 gcggaatcgt gattcacggc tcgggaggag agccttggat aaacgtacgg gctcccattg 421 gggacgacgt tcgctcacgt tctctgacga ttgaacaggc ggacgcaata gatcgtgtca 481 tcgctagcgg tgagaagcac tttgggaaaa attctgtcgt tctccccgtt aaagtaaacc 541 ggaaagcaat cggcgcattg tggattgatt tcgcgcagaa aagcggagat caggacgaaa 601 cccttctggc aatgattgcc gtcctgatcg gcttaacctg ccagcgcgat cgcgaattgt 661 gcagcgatgg cggcgcggtc gccgaggaac aacaagcagg acagattccc aaaatcaaac 721 ccaagcctca tcccacccaa ctcgacaaaa tcgactggat cgttggggag agccccgcga 781 tcaagagggt attagctacc accaatatcg tggcgcgacg aacttccgcg gtgctcttga 841 gaggagagag cggcactggc aaggaatgct ttgctagagc aatacacgca ttatcgatac 901 ggaaaagcaa ggcgtttatt aagttgaatt gcgctgcgct gtcggaaacc gttctggaat 961 ccgaattgtt tggccatgag aagggcgctt tcactggcgc tctccttcaa cgagctggac 1021 gtttcgaact ggccaatggc ggaacgctgt tgcttgatga aattggcgat gtatcaccac 1081 aattccaggc gaagttattg cgcgtgttac aggaaggcga attcgaacgt ctcggcggaa 1141 cgaagacatt gaaagtagac gttcgagtta tatgcgccac caacaaaaac cttgaagtgg 1201 ccgtccttcg aggggagttc agagccgacc tctattaccg gatcaatgtg gtgccgatca 1261 ttttgccgcc acttcggcag cgggacggag acatttcgct tctagcacaa gtgttcctcg 1321 agcaattcaa caaggcaaat gatcgaaatt gcgacttcgc cccgtcggcc atagacattt 1381 tgtcgaaatg cgccttcccc ggcaatgttc gcgagctgga caactgcgtt caaaggaccg 1441 ccactctcgc cagttcaaat accatcactt catcggattt tgcctgtcag caagaccagt 1501 gttcttcggc gctcctctgg aaagacgccc gcgacggcac tggcaacggc ccggtgcata 1561 gtctcaaccc gcgagataca atgttaggcg gactcggggc caacgtaggt actcccagcg 1621 gtgccgcagc cacaatcgag cgagcgggtc tcactgagcg tgatcggctg atcaatgcaa 1681 tggtgaaggc tggctgggta caggccaaag cggctcgtat cctgggtaaa acgccgcggc 1741 aggtcggcta tgcgctacgc cggcatcgta tcgatgtgaa gaaggagtga cagcaatcgc 1801 caagaactcc gtaagcgtgg cccaacgact tcgggcgcga tctattttca tttctacaag 1861 acatctccgg cagcaagcgg ggaaacgagc ggtaaggcga cataagcgct gaaacaataa 1921 tatctcatcg accggaatct ctcttgcttt tggagctgta acctttcctc aacatggaac 1981 agtgcgatgt gggaaccgga aataaaggtc gggacgacca gcagtgcccc ctccgaccgg 2041 gcgccgatgg ctcccgctat gcccggtggc gccgca //