GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS RSPATP2 4240 bp ds-DNA BCT 27-MAY-1991
DEFINITION Rhodospirillum rubrum gene cluster for F(0)-ATP synthase subunits
ACCESSION X12757
KEYWORDS ATP synthase; F-0-ATPase; atp2 gene.
SOURCE Rhodospirillum rubrum DNA.
ORGANISM Rhodospirillum rubrum
Prokaryota; Bacteria; Gracilicutes; Anoxyphotobacteria;
Purple nonsulfur bacteria.
REFERENCE 1 (bases 1 to 4240)
AUTHORS Falk,G. and Walker,J.E.
TITLE DNA sequence of a gene cluster coding for subunits of the F-0
membrane sector of ATP synthase in Rhodospirillum rubrum: Support
for modular evolution of the F-1- and F-0 sectors
JOURNAL Biochem. J. 254, 109-122 (1988)
STANDARD full automatic
COMMENT SWISS-PROT; P15011; ATPZ$RHORU. SWISS-PROT; P15012; ATP6$RHORU.
SWISS-PROT; P15013; ATPF$RHORU. SWISS-PROT; P15014; ATPL$RHORU.
SWISS-PROT; P15015; ATPX$RHORU. SWISS-PROT; P15016; YAT3$RHORU.
SWISS-PROT; P15017; DNU4$RHORU.
*source: library=lambda 2001;
From EMBL entry RRATP2; dated 06-SEP-1990.
FEATURES Location/Qualifiers
CDS <1..521
/note="ORF 3 (174 AA); (1 is 2nd base in codon)"
/codon_start=1
promoter 585..590
/note="-35 region"
promoter 608..613
/note="-10 region"
misc_feature 620..621
/note="pot. transcription start sites"
RBS 706..710
/note="pot. ribosome binding site"
CDS 723..1091
/note="gene 1 product (AA 1 - 123); homolog. to E. coli
uncI gene"
/codon_start=723
RBS 1072..1075
/note="pot. ribosome binding site"
CDS 1087..1809
/note="ATPase F-0-subunit a (AA 1 - 241)"
/codon_start=1087
RBS 1900..1904
/note="pot. ribosome binding site"
CDS 1913..2137
/note="ATPase F-0-subunit c (AA 1 - 75)"
/codon_start=1913
RBS 2346..2349
/note="pot. ribosome binding site"
CDS 2358..2840
/note="ATPase F-0-subunit b' (AA 1 - 161)"
/codon_start=2358
RBS 2835..2840
/note="pot. ribosome binding site"
CDS 2849..3394
/note="ATPase F-0-subunit b (AA 1 - 182)"
/codon_start=2849
terminator 3587..3618
/note="pot. stem loop structure; pot. transcription
terminator;"
repeat_unit 3587..3599
/note="inverted repeat A"
repeat_unit 3606..3618
/note="inverted repeat A'"
promoter 3642..3646
/note="-35 region"
promoter 3669..3674
/note="-10 region"
misc_feature 3680..3680
/note="transcription start site"
RBS 3817..3819
/note="pot. ribosome binding site"
CDS 3825..4148
/note="ORF 4 (AA 1 - 108); homolog. to DNA-binding
proteins"
/codon_start=3825
BASE COUNT 687 a 1386 c 1335 g 832 t
ORIGIN
1 agctcaaccg cgagggccgc agccggctgc tcgagtcctt ccagcgggtc gacggccatt
61 tccgcaccct gttcctgaaa ttattcggcg gcggccgcgc ccatctgacc ttgatcgaat
121 cggacgatcc cctggaagcc ggcctggaga tcatggccag cccgccgggc aagcggctgc
181 aaagcctggg gttgctgtcg ggcggcgagc aggcgctgac ggcgacggcc ctgttgtttg
241 ccgtgttcct gaccaatccc gcgccgattt gcgtgctcga cgaggtcgac gcgccgctcg
301 atgacgccaa tgttgatcgc ttctgcgcca tgctccgcca cctgaccgat accaccggaa
361 cgcgcttcct ggtggtcacc caccaccgca tgacgatggc ccgcatggac cgtctgttcg
421 gggtgacgat ggccgaacgc ggggtctcga gccttgtttc cgtcgacctt tgccaggccg
481 aggatctggt ggaggccgag agccctgccg ccgttttggc ctaactgcct gaaattcagg
541 cgttttgctc cgggcgcgct gcacctccgc cggggttttc ctccttgaca cccctcgcca
601 cgctccgtat tttgcccgcg attttcggac tgttcgccgc gggggagggt gccgcgtctt
661 gcgggagtcc ccggcacttc gcggggacgt tcgtgccgcc tggaaaaagg ggctgccgcc
721 gcatgaccga tcgtgatact cccccctcgc tggaagacat ctcccgccgc ctgaccgagg
781 cgaagggggg tgcggatggc gccgaggcgg acggagcggg gagttccggg ccggcccggg
841 cttccggcct gggaatcggt atgcggatca gcatcgagct ggtcacgacg atcgcggtcg
901 gcggggcgat cggttacggg cttgactcgt ggctgggaac gtcgccgctg gcgatggttg
961 ttttcctcgt tctggggggg gcggccgggg tgatgaatgc ctatcgcgtg gtcaagggcc
1021 tggatgattc cgtgggcctg ggccgggcga tcgagcgcaa agagaaagcg gaagggaaca
1081 aagaccgtgc atagtccggt tgaacagttc gcgatcaaac cactcgtcag catccaggtc
1141 gcgggtgtcg acgtgtcctt caccaactct tcgctgctca tgctcctgac cgttggtctg
1201 gcggccgcgt tcttctggaa cgcgacggcg cggcgcaccc tgattccggg gcgcctgcag
1261 agcgcggccg agatgctgta cgaattcgtc gccaatatga tccgcgacaa cgtgggcaag
1321 gaagggatga agtactttcc ctatatcctg accctgttcg ttttcgtgtt tcttggcaat
1381 atgctgggca tgctgcctta ttccttcacg ttcaccagcc atatcgcggt taccgcggcg
1441 ctggccgtgg gaatcttcat cgccgtcacc atcattggtt tcgcccgaca cggatttcat
1501 tactttcgga tgttcttccc gcatggcgcc ccgctgttga cggcgccgct gctgatcccg
1561 atcgaactga tctcctatct gtcgcggccc ttcagcctgt cggtccgact gttcgccaac
1621 atgaccgtcg gccacatcat gctgaaggtt ctggccggtt tcgtgataat gctgggtgtc
1681 gtcggcggtg tcgtgccgtt cgccgtcgtc cttggcgtga ccgtgctcga gttcttcatt
1741 gccgccttgc aggcctatgt cttcaccatc ttgacctgca tctatctcaa cgacgccatc
1801 aacatgcact aaaggccgat agcgcccccg gcgctgtctt ccgaaatgct gtcggtggct
1861 gaggcgagcc cctcacccct gtccaacttg gttcttttga aagggtaaac tcatggacgc
1921 tgaagccgcg aagatgatcg gcgctggtct tgccgccatt ggcatgattg gttcgggtat
1981 tggcgttggc aacatctggg ccaacctgat tgccaccgtc ggccgcaacc cggccgccaa
2041 gagcaccgtc gagctctacg gctggatcgg cttcgccgtt accgaagcta tcgccctgtt
2101 cgccttggtc gtggcgctga tcctgctgtt cgccgcctaa gtcggcgcgt tcgccgcaag
2161 cggtcggggc cgcgcgccgg atcccgggga tttcccggga gcctccggtg cgcgcccgcc
2221 gcgcgtggca gtctgcctgt ctatcgtggg cgtccggcca tcgaccctct cgcggggggt
2281 gatgatgttc cttccttgga agggaccgtc aaggccggtt cgtctgcgcc ctcgtatgcg
2341 acgcgggagc ccgttccatg cctcaattcg atccttcgtc cttcccttcg cagatcgtct
2401 ggttggtgat cgcccttgtc gcgatgtatt tcgtgatgag ccggttggcc attccccgtt
2461 tggccgaggt gcttgaacag cgccagcggc tgatcaacga cgacctgaag caggccgaag
2521 ccctgaaggc cgagaccgaa gccgccatcg ccgcctacga aacggccctg gccgaagccc
2581 gggcccgtgc ccatgacgaa atccgcgccg tgaccgaggc cgccgccaag gccgccgagg
2641 cgcgcaacgc cgaggtcgcc aaggctctca acacccggat caaggacggc gaggcccgca
2701 tcgttcaggc ccgcgacgaa gccctgaccc acgtgcgcga agtggccggc gcggtcgcca
2761 gcgatatagt cggcaagctc gccgggctgc gcgtcgacga tgccgcgctc accgccgccg
2821 tcgccgccgc gatcaaggag taaggccgat gatctccctc gctctcgccg ccgagaccgc
2881 cgagcacggt ggggaagccg ccagccacgg cggcctgttc gccgatccgg ccttctgggt
2941 ctccatcgcc ttcctgatgg tcgtcggctt tgtttatatc aaggccaaga acaagatcct
3001 tggggccctg gacggtcggg gtgccgcggt caaggccaag ctcgacgagg cccgcaagct
3061 gcgcgacgac gcccaggcgc tgctggccga gtaccagcgc cgccagcgcg acgcgatgaa
3121 ggaagccgac gagatcattc gccacgccaa ggatgaggcc gcccgtctgc gcgccaaggc
3181 cgaagccgat ctcgaggcct cgatccgccg ccgcgaacag caggccgtcg atcgcatcgc
3241 ccaggccgag gcccaggccc tggcccaggt gcgcaacgaa gccgtcgatg tcgccgtctc
3301 cgccgcgcgc tccttgatgg ccgggtcgct ggccaaggcc gatcagaacc gcctgatcga
3361 cgcggcgatc gccgacctgc cgggcaagct gcactaaggc caatcccggg ggctggtgat
3421 ccgggtccga cgacgagtgg cttcccgatc aagatgctaa agcggcgtgt ggagaccttg
3481 gtcaccgcgc gccgcttttg attttatcat cgcgcggccc aagaaacctg ctgcgcggcg
3541 gttcgattca gacgacccca gatcagacgg ccccgaacct tttcccaacg ggacttcgcc
3601 aaaccgcgga gtcccgtttt tatttgccgg tgggtaaaac ttacacccat aggtggtgtt
3661 tatcggaata taaaccagca ctcgacggag tgctcgtttc tcggtatttt tcaagattgt
3721 gagaggtaag gttgtagccc gcttggggga acaatctgcg gctccggccg gttggatcac
3781 gcaagcctcc ggctattcct ccagtcatga atggtcgaga aacgatgccc gagagcgata
3841 cccgcaccat ccatcatgtg gacgcccatg tcggtcaaag ggtccgtcag cgtcggaccg
3901 ccctgatcct tgaccaggaa accctggcgc gccgaatcgg cgtctctttc cagcaaatcc
3961 agaaatacga acgcggccgc aaccggatca gcgccagccg gctctatgac atcgccaagg
4021 cgctggcggt tcccatcgat tattttttca gtgatctgga gcgcggcgat ccccggcatg
4081 acgggctttg gccgaggaca tggggcgctt ggcccaaggc gggagcgccc cgcccgatcc
4141 gttgcgcctg acccaaagcc tggacctggc ccaggccttt tgggcgctgc cgatgacggg
4201 atgcgccaaa gcttcatcgc ccttctcaag gcgatgagct
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