GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS SCS16S 1381 bp ss-mRNA BCT 27-MAY-1991
DEFINITION Saccharopolyspora hirsuta 16S rRNA (part.)
ACCESSION X53196
KEYWORDS 16S ribosomal RNA; ribosomal RNA.
SOURCE Saccharopolyspora hirsuta RNA.
ORGANISM Saccharopolyspora hirsuta
Prokaryota; Bacteria; Firmicutes; Nocardioform actinomycetes.
REFERENCE 1 (sites)
AUTHORS Embley,T.M., Smida,J. and Stackebrandt,E.
TITLE Reverse transcriptase sequencing of 16S ribosomal RNA from Faenia
rectivirgula, Pseudonocardia thermophila and Saccharopolyspora
hirsuta, three wall type IV actinomycetes which lack mycolic acids
JOURNAL J. Gen. Microbiol. 134, 961-966 (1988)
STANDARD full staff_review
REFERENCE 2 (bases 1 to 1381)
AUTHORS Embley,T.M., Smida,J. and Stackebrandt,E.
TITLE The phylogeny of mycolate-less wall chemotype IV actinomycetes and
description of Pseudonocardiaceae fam. nov.
JOURNAL Syst. Appl. Microbiol. 11, 44-52 (1988)
STANDARD full automatic
REFERENCE 3 (bases 1 to 1381)
AUTHORS Stackebrandt,E.
JOURNAL Unpublished (1990)
STANDARD full automatic
COMMENT the genus Saccharopolyspora is proposed to be classified in the
family Pseudonocardiaceae *source: strain=ATCC 27875 (T).
From EMBL entry SH16S; dated 25-MAY-1990.
FEATURES Location/Qualifiers
rRNA <1..>1381
/note="16S rRNA"
BASE COUNT 287 a 314 c 454 g 274 t 52 others
ORIGIN
1 atgagtggcg aacgggtgag taacacgtgg gtaatctgcc ctgcactctg ggataagcct
61 tggaaacggg gtctaatacc ggatatgaca gatgaaggca tctttgtttg tggaaagttc
121 tggcggtcca ggatnagccn ncggcctatc ngctngttng tggggtgatg gcctaccaag
181 gcgacgacgg gtagccggcc tgagagggtn accggccaca ctgggactga gacacggcct
241 ngactcctac gggaggcagc agtggggaat cttgcgcaat gggcgaaagc ctnacgcagc
301 aacgccgcgt gggggatgac ggcttcgggt tgtaaacctn tttcgacatc gacgaagcca
361 tctttggtgg tgacggtagg tgtagaagaa gcaccggcta actacgtgcc agcagccgcg
421 gtaatacgta gggtgcgagc gttgtccgga tttattgggc gtaaagagct cgtaggcggt
481 ttgtcgcgtc tatcgtgaaa accgggagct naactcctng cttgcggtgg atacgggcag
541 acttgagttc ggcaggggag actggaattc ctggtgtagc ggtgaaatgc gcagatatca
601 ggaggaacnc cggtggcgaa ggcgggtctc ttggccgata ctgacgctga ggagcgaaag
661 cgtgggnagc gaacaggatt agataccctg gtagtccacg ccgtaaacgt tgggcgctag
721 gtgtggggat gggttccact gtttccgtgc cttagctaac gcattaagcg cctcgcctgg
781 ggagtacggc cgcaaggcta aaactcaaag gaattgacgg gggccngcac aagcggcgga
841 gcatgtggat taattcgatg naacgcgaag aaccttacct gggtttgaca tgcactagac
901 agcccctgag agggnnnntc cctngtngtt ggtgtacagg tggtgcatgg ctgtcgtcag
961 ctcgtgtcgt gagatgttgg gttaagnccc gcaangagcg caaccctnnt ncnntgttgc
1021 nagcnnntnn nnnnggggac tcntggggga ctgccggggt naactcggag gaaggtgggg
1081 atgacgtcaa gtcatcatgc cccttatgcc tagggcttca cacatgctac aatggccggt
1141 acagagggct gcgagatcgt gaggttgagc gaatccctna aagccggnct nagttcggat
1201 cggggtctgc acctngaccc cgtgaagtcg gagtcgctag taatcgcaga tcagcattgc
1261 tgcggtnaat ncgttcccgg gccttgtaca caccgnncgt nacgtcatga aagacggtaa
1321 cacccgaacc catggcccaa cccttgtggg gggagtngtc gaaggtggga ctngcgatcc
1381 c
//