GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS STYPROVW 2010 bp ds-DNA BCT 27-MAY-1991
DEFINITION S. typhimurium proV gene and proW, 5' region
ACCESSION X52693
KEYWORDS proU locus; proV gene; proW gene; promoter;
unidentified reading frame.
SOURCE Salmonella typhimurium DNA.
ORGANISM Salmonella typhimurium
Prokaryota; Bacteria; Gracilicutes; Scotobacteria;
Facultatively anaerobic rods; Enterobacteriaceae.
REFERENCE 1 (bases 1 to 2010)
AUTHORS Stirling,D.A., Hulton,C.S., Waddell,L., Park,S.F., Stewart,G.S.,
Booth,I.R. and Higgins,C.F.
TITLE Molecular characterization of the proU loci of Salmonella
typhimurium and Escherichia coli encoding osmoregulated glycine
betaine transport systems
JOURNAL Mol. Microbiol. 3, 1025-1038 (1989)
STANDARD full automatic
COMMENT SWISS-PROT; P17327; PROW$SALTY. SWISS-PROT; P17328; PROV$SALTY.
SWISS-PROT; P17424; YPRO$SALTY.
*source: strain=LT2; See also <X52694> for E. coli proU locus.
From EMBL entry STPROVW; dated 18-JUN-1990.
FEATURES Location/Qualifiers
CDS <1..303
/note="Open reading frame (101 AA)"
/codon_start=1
promoter 565..570
/note="-35 region"
promoter 587..592
/note="-10 region"
precursor_RNA 599..>2010
/note="primary transcript"
CDS 661..1860
/note="proV protein (AA 1-400)"
/codon_start=661
CDS 1856..>2010
/note="proW protein (AA 1-52) (2010 is 2nd base in codon)"
/codon_start=1856
BASE COUNT 528 a 475 c 515 g 492 t
ORIGIN
1 aagcttttcg cgctggattt gttgatggaa ctgtacgaca acgaaatccg ctacacagaa
61 gcgttatatg cggaaaccgg ctgggttaac gacgtcaaag ccttcttgtg ctacaacgcc
121 aataaagcct taatgaacct gggttatgag gcgttatttc cgccggagat ggcagacgtg
181 aatcccgcaa tccttgccgc gctctcgccg aatgccgacg aaaaccatga tttcttttcc
241 ggctcaggtt catcttatgt gatggggaaa acagtcgaaa ccgaagacga agactggaat
301 ttttaacctt acgggcatgg gaaataacgt tacatttccc atgcctttat ttcaagcaat
361 agggagtcaa atcgcgcaaa tattacaaca tgtcctacac tcaatacgag tgacattatt
421 cacctggatt cccccaattc aggtggattt ttgctggttg ttccaaaaaa tatctcttcc
481 tccccattcg cgttcagccc ttatatcatg ggaaatcaca gccgatagca cctcgcaata
541 ttcatgccag aagcaaattc agggttgtct cagattctga gtatgttagg gtagaaaaag
601 gtaactattt ctatcaggta acatatcgac ataagtaaat aacaggaatc attctattgc
661 atggcaatta aattagaagt gaagaatctg tataaaatat ttggagagca tccgcagcgt
721 gccttcaaat atattgaaaa gggactatcg aaagagcaaa tactggaaaa aacggggcta
781 tcgcttggcg ttaaagacgc cagtctggcc attgaagaag gcgagatatt tgtcatcatg
841 ggattatccg gctcgggtaa atccacaatg gtacgccttc tcaatcgcct gattgaaccc
901 acccgcggac aggtactgat tgacggcgtt gatattgcca aaatatcaga cgctgagctt
961 cgcgaggtgc gcaggaaaaa gattgcgatg gtcttccagt catttgcgct catgccgcat
1021 atgaccgtgc tggataatac ggcattcggt atggaattag cgggcatcgc ggcgcaagag
1081 cgtcgcgaaa aagcgctgga cgccttgcgt caggtggggc ttgagaatta ccgtcacgcc
1141 tacccggatg aactttccgg tgggatgcgt cagcgtgttg ggcttgcccg cgcgctggca
1201 atcaaccctg atatcttatt aatggatgaa gcgttttccg ccctcgatcc attaattcgt
1261 accgaaatgc aggatgagct ggtgaaatta caggcgaaac atcagcgcac cattgtcttt
1321 atttcccacg atcttgatga ggctatgcgt attggcgaca ggattgccat tatgcaaaat
1381 ggcgaggtcg tacaggttgg tactccggat gagatcctga ataatccggc aaatgattat
1441 gtccgcacgt tcttccgtgg cgtggatatt agtcaggtct ttagcgccaa agatattgcc
1501 cgtcgcagcc cggtcggatt aattcgtaaa acgccaggtt tcggtccccg ttcggcactg
1561 aaattattac aggacgaaga ccgtgaatat ggttacgtca ttgagcgtgg caataaattc
1621 gtgggcgtcg tgtccatcga ctcattaaaa gcggcattaa gccaggcgca agggattgaa
1681 gcggcgctta tcgacgaccc tttagtcgtt gatgcgcaaa ccccactcag cgagttgctc
1741 tctcacgtcg gccaggcgcc ctgcgcggtg ccggttgtcg atgaagaaca ccagtatgtt
1801 ggcattattt caaaacgtat gttgctacag gctttagatc gcgagggggg taacaatggc
1861 tgatcaaacg aatccgtggg ataccgcaca ggtggccgat actacgacgc aaacggctga
1921 tgcctgggga acaccggcag gcgtacggac ggacggcggc agtaccgact ggttgaacag
1981 cgcgcccgcg ccagcccctg aacacttttc
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