GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS HUMCG11 1716 bp ds-DNA PRI 27-MAY-1991
DEFINITION Human DNA for 5' terminal region of LINE-1 transposable element
clone CGL1-1
ACCESSION X52230
KEYWORDS LINE repetitive sequence; LINE-1; poly(A)-type retrotransposon;
retrotransposon.
SOURCE Homo sapiens DNA.
ORGANISM Homo sapiens
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE 1 (bases 1 to 1716)
AUTHORS Hohjoh,H.
JOURNAL Unpublished (1990)
STANDARD full automatic
REFERENCE 2 (bases 1 to 1716)
AUTHORS Hohjoh,H., Minakami,R. and Sakaki,Y.
TITLE Selective cloning of the Human L1 (line-1) sequence which
transposed in a relatively recent past.
JOURNAL Nucleic Acids Res. 18, 4099-4104 (1990)
STANDARD full automatic
COMMENT *source: strain=Japanese; tissue=placenta; clone=CGL1-1;
Data kindly reviewed (04-SEP-1990) by Hohjoh H.
From EMBL entry HSCG11; dated 25-SEP-1990.
FEATURES Location/Qualifiers
misc_feature 1..1276
/note="LINE-1 (CGL1-1) 5'flanking region"
misc_feature 1277..1716
/note="LINE-1 5'terminal region"
BASE COUNT 700 a 261 c 316 g 439 t
ORIGIN
1 gatctagagt tcagtacagg atagatttct tcaagcccta cctctattaa aaagaatttt
61 taaagctccc aagactcaaa gataaatttt taaaatatta attccagaat attaaaacaa
121 ttttctaaaa tagtgaagaa tcaaattaat atcaaattct aaatagctac actacgtatg
181 aggagaaaat gacataaaat ttttgttttg aaggaaaaga ccttgagtca acttgaatat
241 ctagttgaat tataatttat atatgagagt aaacattacc caacttttga actagtaaaa
301 aaaaaaaatc ttaataaagg gaatcaaaat aaagaaggag aagggagagg aaaattaaga
361 gaaaagaaag agaaaaaata cgtcaattga tatataaaaa taacatagta ggaataagta
421 ctgatgctat ttataattaa aatagattac tccgaaggat acatatttcc ataatagttt
481 tataaaaaat tcagcaatgt cgaagataag agacttgaac tgagaagaaa ctaaatgatt
541 gaaaataaac agatatgcca aacaaatact gaaaaacaga atgctagagc ttcaactttc
601 atatgaggca aaacagaact taaaaacaaa caagaacact atgagatata agtaataatt
661 cacagagtag gaatatgtaa taaatcatga acacatatgc acctaataac atattttcag
721 gatatacaaa gcaacaattt acatgatgat gcagcagata aaattaaaac tttagctgga
781 aatgttaatg tttttatcac agacactgaa aaaatgaagt agacaaaaat gtaaacatta
841 tagacaattt gaaacataaa caaagcttta cactgattaa ataaaggtta ttttttttta
901 aatgtgcttg gaaagtttat aaattcagcc aaataataaa gtctcagcaa aagcagaaaa
961 cgtttattat gtaaactatg ttatctaatt gttatactat aatatcataa ataaattaca
1021 aaaggataat tttgaaattc catatgtcca ataattaaaa taatactact aaatcacagg
1081 taaaaattaa gtcagaaagg aaattagtaa aatttagatc tgaaagacaa taaaaagcca
1141 aatgacaaaa tttgtgagtt acagctatag caatatttaa aataaaaatt ataaatacat
1201 ttattttaaa aataaggaag attaaaaact aatgaactaa gaatttgatt ttaaaaatat
1261 ataagaggat taccaggaga ggagccaaga tggccgaata gcaacagctc cggtctacag
1321 ctcccagcgt gagcgacgca gaagacgggt gatttctgca tttccatctg aggtactggg
1381 ttcatctcac tagggagtgc cagacagtgg gcgcaggtca gtggcgcgca ccgtgcacga
1441 gccgaagcag ggcgaggcat tgtctcactt gggaagcgca aggggtcagg gagttccctt
1501 tccgagtcaa agcaaggggt gacggacgca cctggaaaat cgggtctctc ccacccgaat
1561 attgcgcatt tcggaccggc ttaaaaaacg gcgcaccgcg agattatatc ttgcacctgg
1621 ctaggagggt cctacgccca cggagtctcg ctgattgcta gcacagcagt ctgagatcaa
1681 actgcaaggc cgcagcaagg ctgggggagg ggcgcc
//GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS HUMCG13 1695 bp ds-DNA PRI 27-MAY-1991
DEFINITION Human DNA for 5' terminal region of LINE-1 transposable element
clone CGL1-3
ACCESSION X52232
KEYWORDS LINE repetitive sequence; LINE-1; poly(A)-type retrotransposon;
retrotransposon.
SOURCE Homo sapiens DNA.
ORGANISM Homo sapiens
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE 1 (bases 1 to 1695)
AUTHORS Hohjoh,H.
JOURNAL Unpublished (1990)
STANDARD full automatic
REFERENCE 2 (bases 1 to 1695)
AUTHORS Hohjoh,H., Minakami,R. and Sakaki,Y.
TITLE Selective cloning of the Human L1 (line-1) sequence which
transposed in a relatively recent past.
JOURNAL Nucleic Acids Res. 18, 4099-4104 (1990)
STANDARD full automatic
COMMENT *source: strain=Japanese; tissue=placenta; clone=CGL1-3;
Data kindly reviewed (04-SEP-1990) by Hohjoh H.
From EMBL entry HSCG13; dated 25-SEP-1990.
FEATURES Location/Qualifiers
misc_feature 1..231
/note="Alu sequence"
misc_feature 232..1151
/note="LINE-1 (CGL1-3) 5'flanking region"
misc_feature 1152..1695
/note="LINE-1 5'terminal region"
BASE COUNT 629 a 302 c 374 g 387 t 3 others
ORIGIN
1 tcgagaccag cctggccaac atggtgaaac cccatcgcta ctaaaaatac aaaaaatagc
61 tgggcgtggt ggcatgtgcc tgtaatccca gctacctggg gagctgaggc aggagaattg
121 ctagagccca caaagtggag gctgtagtga gttgagccac tgcactccag cctgggcgac
181 agagcaaaga ctctatctca aaaaaaaaaa acacaaaaaa caaaaaacaa aactgagaga
241 gccagaaatg gtaaatacat gtatgtattt aaattttttc tcaactctta aagtttttaa
301 aagacaacta tttaaaaaga aaaaataatg tattataggg ttcacagcac atgaacaagt
361 aaaacacata acaacagcac aaaagatagg nctgaaatgg agatagagtg ttaaagagta
421 tttatatatg aagtaatata tattatttga aggttgacag tgataagcta aagatgtgta
481 ttatgaaccc taaaattacc tctgagaaat aaagcagagg gatggctaat aaaccaaaag
541 gaaagataaa ataaaataat agaaagtatt tgttggttca aaaacaggca gaaaagnagg
601 gagaaaatca tgaagaacag agccaaaaat tagaaagtga atatcaaatt ggcacagtaa
661 tactccacat aataattaca ttaaatataa atagaccaaa aaatccagtc aaaaaaagat
721 tttaagattt gattaaaaag gaaacaccag ccatgcaggg tgactcatat ctgccattgc
781 agtactttgg gagactgagg cagaaggatc acatgaggcc aggattttga gaccagcctg
841 agaaagaaag caagacccat gactctacaa aaaaaaggaa atagctaact atatgctgtt
901 tacaaaagac acatattaaa tataaaagac atatgttaaa tataaatata taaaatatat
961 aaattatata atatataaat atataaaata tataagttaa agttaaaaga tagaaaaaga
1021 caaacaagga aatattaatc ataagaaaac tggagaggtt ctgttaatat aaaacaaagt
1081 acatacagaa catttcagta tcaccagaga taaggaggga aatttcacaa tgattaataa
1141 gtaccaattt ggggaggagc caagatggcc gaataggaac agctcccgtc tgcagctccc
1201 agcctgagcg acgcagaaga cgggtgattt ctgcatttcc atctgaggta ccgggttcat
1261 ctcactaggg agtgccagac agtgggcgca ggtcagtggg tgcgcgcncc gtgcgcgagc
1321 cgaagcaggg cgaggcattg cctcacacgg gaagcacaag gggtcaggga gttccctttc
1381 cttttttttt tttttttttt tttttttttt tttttttttt ggagttccct ttcctaatca
1441 aagaaagggg tgacggacgg cacctggaaa atcgggtcac tcccacccga atactgcgct
1501 tttccgacgg gcttaaaaaa cggcacagca cgagattata acccgcacct ggctcggagg
1561 gtcctacccc acggagtctc gctgattgct agcacagcag tctgagatca aactgcaagg
1621 cggcagcgag gctgggggag gggcgcccgc cattgctgag gcttgcttag gtaaacaaag
1681 cagcgggaag ctcga
//GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS HUMCG14 542 bp ds-DNA PRI 27-MAY-1991
DEFINITION Human DNA for 5' terminal region of LINE-1 transposable element
clone CGL1-4
ACCESSION X52233
KEYWORDS LINE repetitive sequence; LINE-1; poly(A)-type retrotransposon;
retrotransposon.
SOURCE Homo sapiens DNA.
ORGANISM Homo sapiens
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE 1 (bases 1 to 542)
AUTHORS Hohjoh,H.
JOURNAL Unpublished (1990)
STANDARD full automatic
REFERENCE 2 (bases 1 to 542)
AUTHORS Hohjoh,H., Minakami,R. and Sakaki,Y.
TITLE Selective cloning of the Human L1 (line-1) sequence which
transposed in a relatively recent past.
JOURNAL Nucleic Acids Res. 18, 4099-4104 (1990)
STANDARD full automatic
COMMENT *source: strain=Japanese; tissue=placenta; clone=CGL1-4;
Data kindly reviewed (04-SEP-1990) by Hohjoh H.
From EMBL entry HSCG14; dated 25-SEP-1990.
FEATURES Location/Qualifiers
misc_feature 1..56
/note="LINE-1 (CGL1-4) 5'flanking region"
misc_feature 57..542
/note="LINE-1 5'terminal region"
BASE COUNT 138 a 147 c 162 g 95 t
ORIGIN
1 tcgaacacat ctcatatacg gaattctttt caatacacaa atttggaccc aaagagagga
61 ggagccaaga tggccgaata ggaacagctc cggtctacag ctcccagcgt gacgacgcag
121 aagacgggtg atttctgcat ttccatctga ggtacggggt tcatctcact agggagtgcc
181 agacagtggg cgcaggtcag tgggtgcgcg ccatgagcga gccgaagcag ggcacgttgc
241 ctcacctggg aagcacaagg ggtcagggag ttccctttcc gagtcaaaga aaggggtgac
301 ggacgcacct ggaaaatcgg gtcactccca cccgaatatt gcgcttttca gaccggctta
361 aaaaacggcg caccacgaga ctatatccca cacctggctc ggagggtcct acgcccacgg
421 agtctcgctg attgctagca cagcagtctg agatcaaact gcaaggcggc agcgaggctg
481 ggggaggggc gcccgccatt gcccaggctt gcttaggtaa acaaagcagc cggcaagctc
541 ga
//GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS HUMCG15 493 bp ds-DNA PRI 27-MAY-1991
DEFINITION Human DNA for 5' terminal region of LINE-1 transposable element
clone CGL1-5
ACCESSION X52234
KEYWORDS LINE repetitive sequence; LINE-1; poly(A)-type retrotransposon;
retrotransposon.
SOURCE Homo sapiens DNA.
ORGANISM Homo sapiens
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE 1 (bases 1 to 493)
AUTHORS Hohjoh,H.
JOURNAL Unpublished (1990)
STANDARD full automatic
REFERENCE 2 (bases 1 to 493)
AUTHORS Hohjoh,H., Minakami,R. and Sakaki,Y.
TITLE Selective cloning of the Human L1 (line-1) sequence which
transposed in a relatively recent past.
JOURNAL Nucleic Acids Res. 18, 4099-4104 (1990)
STANDARD full automatic
COMMENT *source: strain=Japanese; tissue=placenta; clone=CGL1-5;
Data kindly reviewed (04-SEP-1990) by Hohjoh H.
From EMBL entry HSCG15; dated 25-SEP-1990.
FEATURES Location/Qualifiers
misc_feature 1..493
/note="LINE-1 5'terminal region"
BASE COUNT 118 a 130 c 157 g 87 t 1 others
ORIGIN
1 tcgaggagcc aagatggccg aataggaaga gctccggtct acagctccca gcgtgagcga
61 cgcagacgac aggtgatttc tgcatttcca tctgaagtac cgggttcatc tcactaggga
121 gtgccagaca gtgggcgcag gtcagtgggt gcgcgcaccn ttgtgcgagc cgaagcaggg
181 tgaagcattg cctcacttgg gaagcccaag gggtcaggga gttccctttc ccagtcaaag
241 aaaggggtga cggacggcca tggaaaatcg ggtcactccc acccgaatac tgcgcttttc
301 cgacgggctt aaaaaacggc gcaccacgag attatatcgc gcacctggct cggagggtcc
361 tacgcccacg gagtctcgct gattgctagc acagcagtct gagatcaaac tgcaaggcgg
421 cagcgaggct gggggagggg cacatgccat tgcccaggct tgattaggta aacaaagcag
481 ctgggaagct cga
//