GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS HUMHS5R 3768 bp ds-DNA PRI 27-MAY-1991
DEFINITION Human specific HS5 DNA
ACCESSION X17579
KEYWORDS HS5 DNA; LINE-1 repetetive element; human specific DNA.
SOURCE Homo sapiens DNA.
ORGANISM Homo sapiens
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE 1 (bases 1 to 3768)
AUTHORS Ueda,S.
JOURNAL Unpublished (1989)
STANDARD full automatic
REFERENCE 2 (bases 1 to 3768)
AUTHORS Ueda,S., Washio,K. and Kurosaki,K.
TITLE Human-specific sequences: isolation of species-specific DNA regions
by genome subtraction.
JOURNAL Genomics 8, 7-12 (1990)
STANDARD full automatic
COMMENT See X17580 for associated region from Pan troglodytes.
From EMBL entry HSHS5R; dated 05-NOV-1990.
FEATURES Location/Qualifiers
misc_feature 1071..2056
/note="HS5 human specific region"
misc_feature 2057..3767
/note="LINE-1 family homologous region"
BASE COUNT 1325 a 641 c 580 g 1221 t 1 others
ORIGIN
1 gaattccagg ctgcagtgag caagttttat ttctaattgt taattgttag catatagaca
61 gcaaaattat atttataaat tgtcattcta ccctgcaatg ttgttaaatt cattgattag
121 atctattagc tatgtctttg tagattccct tggattgtct acctaaacaa ccatactgta
181 tgcagataaa gacacttctt ttttctttct ttctaaccca taagtcattt agttatttgt
241 tgttgtttct tgctgaattg gctaacattt ccagtacaaa ggtgttgatc aagtggtggg
301 agcagaaatc cttgtccgat ttctgatttt aagtggaagc agttagtatt ttacaattaa
361 gcattatact aactgtagtt tttctttgta tttctagttt gctgataggt ttttattttt
421 aaatcataga tgggtgctta attttatcaa atgtttttgc cacatgtatt aagattatca
481 tatgaatttt gtcctttcct tttattattt tgataatggt ttcggctaat ttttaaaatg
541 ttaaatcaca ttatattgtt gggataacag cataatgtca tgtcttatac tatttatata
601 atgtagaata tattttgtac tttgttaagg atttttgctt gtcttttcat aagagattgt
661 attctgtgct atttgttcct tgaaatatat acaactaata ttcatatcat aattagtctg
721 gcctcataaa attatttggg aagtgatctc ttttctttta tagctgaaac atttgtgtaa
781 gactggtatc attgctttac cattagttag agtctaccag tgaaaacatc ttggcctggt
841 gggaaagttt agacttgtaa attttttttt ttcaaacaaa tctaggccta ttcatgtgtt
901 ctgcttcttt tatctaatct gtctttcatc aaaaactaat cacggaggat gacagaagtt
961 ttcctctgct tatttttaag ccctctaatg tgtgcctaca agatgtcatg gtgcaccaca
1021 aattacttaa gacttggaca atcaatggct taagaaaata caagtgataa aattcacaca
1081 tcccaataat tatctttcaa catgatcact ctaggaagct ctctactaat tctgacaata
1141 tgttcacaat accagcttga gatgttgcct cagataagta tctttggttt caaatgcgtt
1201 aatatgatct gggtcgataa tccttgtttt agaaacttgt atcccttttt ggttttccta
1261 tattatctaa gtcatcaaac ttattgacat atatttactc ataatgttta gttattatat
1321 catattttct gtaggatcta tagtaacatt ctcttaatca tttctgacat tgtgttttcc
1381 tctgtattgt cttgatgaat tttgctagag atgtatcaat tttcttcatc tttttataaa
1441 actaggtttt ggcttttgtt gactttatca tttactctta actttattaa tttatattct
1501 tgacattatt ttttatcttc tgtagttgac tcttaaacaa tgtgagtttg aacatacggg
1561 tccacttacg tacaaatatt cttctgcctc tgtcatctcg agacagaagg actaaccatt
1621 ccctttcctc ctcctcctca gcctactcaa cataaagatg atgaggatga agatgtttat
1681 gatgatcact tctacttaat aaagaataac tatatttttt attctgtgtg attgtcttaa
1741 ctttctctat cttactttat tgtaagaata gagtatatat atatatatag cataaaaata
1801 tggattaaca gactatttat gttattggta atacatactt tgtcataact ttaactgagt
1861 aggtgaaaga tctgtacact ggaaattaca aaaaattgat gaaagaaatt aaacaaggca
1921 caaataaatt gaaagatgtc ttgtgtttcc agatttaaat agttaatatt gttaaatgtc
1981 catagggatt cctttttatc ctcttcactt ctcatcgctt gctgtgctgg cctatgcctc
2041 tgtctgtgtg tctcatcaaa agccatatgt taatctcaac agatgcagaa aaagcttttg
2101 agaaattcaa aaattgcttc acgataaaaa ctctcaactc gttaggcaca aaggaacacg
2161 cctcaaaagg aacacgcctc aaaataatat gagctatcta tgacaaactc acagccaaca
2221 tcatactgaa tgggcaaaag ctggaagtgt tccccttaag aattagaata agacaaggat
2281 gcccactctc accactcctg ttcaactgga agtcctaggc agagcaatca ggaaagagaa
2341 agaaataaaa ggcatccata taggaaaaga agaagttaaa tagtctctct tcactgatgt
2401 tataatttta tacctaggga accctaaaga ttctgccaaa ataatcctag agctgataaa
2461 acaattttac taaagtttca ggttacaaaa tcatgtacaa aaatcactag catttctgaa
2521 cactgataat gttcaaactg ggaaccaaag caaaacgcaa ttccatagcc acacaaaaac
2581 taaaatacct aggaataaat caaatcaagg aggtgaaaga tctctccaag gagagctgca
2641 aaacactatt gaaaaaagtc agagatgata caaacaaatg gaaaaaaatt ccatgttcat
2701 ggattggaag aattagtgtt gtaaaatggc caaactaccc aaagcagcca gcacgattca
2761 actctattcc tatcaaatta ccaacatcac ttttcacaga attaggggaa actattctaa
2821 aattcatatg gaaccaaaaa agagcctgaa tagccaaggc aatcctaagc ataaagctgg
2881 aggcgtcaca ttacccaact tcaaactata ctacaaggca aaacagtata gtactggtat
2941 gaaggcagac acatacatga atggaacatg atagagaacc cagaaataaa accacacacc
3001 tacagtcatc tgatcttcaa caaagttgac aaaaacataa gcaatacagt aagtactcta
3061 tagtcaataa atggcactgc aatagctggc tatccatatg cagaagaatg aaactggact
3121 cttgcttaaa accatataca aaaattagct caagatggat taaagactta aatgtaagat
3181 ctaaaactat aaaaatccta ggagaaaaca taagaaatat gcttctatac atttacattg
3241 gtcttggcaa aaaaattata actaagtcct caaaagcaac tgcaacaaaa atgaaaactg
3301 acaaaagatg tctaattaaa ctaaagagct tctgcacagc aaaacaaact atggacagag
3361 taaatagata agtacagaat gggagaaaat attcacaaac tatgcatcca ataaaggtct
3421 agtatccaga accttattat aaggaactta aacaaatcac caagtaaaat acaaataacc
3481 bcaattttaa aaaatgggca aaaagcatga acagacattt ctcaaaagaa tacatataag
3541 cagccaacaa acatgaaaaa atattccaca tcactaatcc tcagagaaat gcaaatcaaa
3601 accacaatga cataagtaac accagtcaga atggctttta ttaaaaagtt aaaatataac
3661 agatgatggt gtggttatgg agaaaagtga atgcttatat attgttgatg ggaatataaa
3721 tgagctcaga cactgtggaa agcagtttgg agatttctca aggaattc
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