GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS ECOCADAB 5028 bp ds-DNA BCT 27-MAY-1991
DEFINITION Escherichia coli lysin decarboxylase (cadB, complete cds, and cadA,
5' end) genes.
ACCESSION M67452
KEYWORDS cadA gene; cadB gene; lysine decarboxylase.
SOURCE E.coli K-12 DNA, clones lambda-[5G7, 21H11].
ORGANISM Escherichia coli
Prokaryota; Bacteria; Gracilicutes; Scotobacteria;
Facultatively anaerobic rods; Enterobacteriaceae.
REFERENCE 1 (bases 1 to 5028)
AUTHORS Olson,E.R., Watson,E.B. and Dunyak,D.S.
JOURNAL Unpublished (1991)
STANDARD full staff_entry
FEATURES Location/Qualifiers
CDS 872..2410
/function="Unknown function, but is similar to phoB family
of transcriptional activators"
/product="transcriptional activator"
/gene="transcriptional activator"
/codon_start=872
promoter 2662..2692
/note="pH induced promoter"
/evidence=EXPERIMENTAL
/partial
mRNA 2700..5028
/note="pH induced"
/evidence=EXPERIMENTAL
/partial
CDS 2775..4109
/gene="cadB"
/codon_start=2775
CDS 4183..5028
/product="lysine decarboxylase"
/gene="cadA"
/codon_start=4183
/partial
BASE COUNT 1323 a 1110 c 1110 g 1485 t
ORIGIN 93.5 min. on K-12 map.
1 gtcgacactg cacatcggct ggcggaagat atcctgcgct tcgcccgctg ccgccagggt
61 ggtgcattga cctgacagaa acacagaaaa gaagcgattt gccgcaatct taagcagttg
121 aatcgctttt actgaaatta ggttgacgag atgtgcagat tacggtttaa tgcgccccgt
181 tgcccggata gctcagtcgg tagagcaggg gattgaaaat ccccgtgtcc ttggttcgat
241 tccgagtccg ggcaccaaat tcatataaac ggacctccac ggaggtcgtt tgcgtttcag
301 ggcgccacga tttaagcgtt ctgcctccaa atcaattcta ccgaactcaa ccagattctc
361 cccacatcac cagcaatttg cgggcatatc ccaattcggg aaaatttgtt cctgagctat
421 agcactaact gacgtgaaat gtcgtgcggc cccgtgatgc tgttgaacgt caaatgacgt
481 catcaggagc gtaacgcatc cataaagcac aacaccggtc tgaacggcga ctgatgagat
541 tttctgaatg agaacaaaga gaaatgtatc agttcgcttg ctcatgcaaa gactaacaat
601 ccattaaaat agtaagtgct ccggacaatt ttccatggat tattttctga acatttttct
661 ttggcaaaga tgatgaattt tgatggtaag gaatattact tctggttctc agtaaaatcc
721 tttcgtaata ctatgtaatc aagaagttta tggctggtaa aaataacgtc ttgcattcac
781 caataatatg taaataaacc catctataga tggtaaaaat aggttgtggc aattatcatt
841 gcatcattcc cttttcgaat gagtttctat tatgcaacaa cctgtagttc gcgttggcga
901 atggcttgtt actccgtcca taaaccaaat tagccgcaat gggcgtcaac ttacccttga
961 gccgagatta atcgatcttc tggttttctt tgctcaacac agtggcgaag tacttagcag
1021 ggatgaactt atcgataatg tctggaagag aagtattgtc accaatcacg ttgtgacgca
1081 gagtatctca gaactacgta agtcattaaa agataatgat gaagatagtc ctgtctatat
1141 cgctactgta ccaaagcgcg gctataaatt aatggtgccg gttatctggt acagcgaaga
1201 agagggagag gaaataatgc tatcttcgcc tccccctata ccagaggcgg ttcctgccac
1261 agattctccc tcccacagtc ttaacattca aaacaccgca acgccacctg aacaatcccc
1321 agttaaaagc aaacgattca ctaccttttg ggtatggttt tttttcctgt tgtcgttagg
1381 tatctgtgta gcactggtag cgttttcaag tcttgataca cgtcttccta tgagcaaatc
1441 gcgtattttg ctcaatccac gcgatattga cattaatatg gtaaataaaa gttgtaacag
1501 ctggagttcc ccgtatcagc tctcttacgc gataggcgtg ggtgatttgg tggcgacatc
1561 acttaacacc ttctccacct ttatggtgca tgacaaaatc aactacaaca ttgatgaacc
1621 gagcagttcc ggtaaaacat tatctattgc gtttgttaat cagcgccaat accgtgctca
1681 acaatgcttt atgtcgataa aattggtaga caatgcagat ggttcaacca tgctggataa
1741 acgttatgtc atcactaacg gtaatcagct ggcgattcaa aatgatttac tggagagttt
1801 atcaaaagcg ttaaaccaac cgtggccaca acgaatgcag gagacgctcc agaaaatttt
1861 gccgcatcgt ggtgcgttat taactaattt ttatcaggca catgattatt tactgcatgg
1921 cgatgataaa tcattgaacc gtgccagtga attattaggt gagattgttc aatcatcccc
1981 agaatttacc tacgcgagag cagaaaaagc attagttgat atcgtgcgcc attctcaaca
2041 tcctttagat gaaaaacaat tagcagcact gaacacagaa atagataaca ttgttacact
2101 gccggaattg aacaacctgt ccattatata tcaaataaaa gcggtcagtg ctctggtaaa
2161 aggtaaaaca gatgagtctt accaggcgat aaatactggc attgatcttg aaatgtcctg
2221 gctaaattat gtgttgcttg gcaaggttta tgaaatgaag gggatgaacc gggaagcagc
2281 tgatgcatat ctcaccgcct ttaatttacg cccaggggca aacacccttt actggattga
2341 aaatggtata ttccagactt ctgttcctta tgttgtacct tatctcgaca aatttcttgc
2401 ttcagaataa gtaactccgg gttgatttat gctcggaaat atttgttgtt gagtttttgt
2461 atgttcctgt tggtataata tgttgcggca atttatttgc cgcataattt ttattacata
2521 aatttaacca gagaatgtca cgcaatccat tgtaaacatt aaatgtttat cttttcatga
2581 tatcaacttg cgatcctgat gtgttaataa aaaacctcaa gttctcactt acagaaactt
2641 ttgtgttatt tcacctaatc tttaggatta atcctttttt cgtgagtaat cttatcgcca
2701 gtttggtctg gtcaggaaat agttatacat catgacccgg actccaaatt caaaaatgaa
2761 attaggagaa gagcatgagt tctgccaaga agatcgggct atttgcctgt accggtgttg
2821 ttgccggtaa tatgatgggg agcggtattg cattattacc tgcgaaccta gcaagtatcg
2881 gtggtattgc tatctggggt tggattatct ctattattgg tgcaatgtcg ctggcgtatg
2941 tatatgcccg actggcaaca aaaaacccgc aacaaggtgg cccaattgct tatgccggag
3001 aaatttcccc tgcatttggt tttcagacag gtgttcttta ttaccatgct aactggattg
3061 gtaacctggc gattggtatt accgctgtat cttatctttc caccttcttc ccagtattaa
3121 atgatcctgt tccggcgggt atcgcctgta ttgctatcgt ctgggtattt acctttgtaa
3181 atatgctcgg cggtacttgg gtaagccgtt taaccactat tggtctggtg ctggttctta
3241 ttcctgtggt gatgactgct attgttggct ggcattggtt tgatgcggca acttatgcag
3301 ctaactggaa tactgcggat accactgatg gtcatgcgat cattaaaagt attctgctct
3361 gcctgtgggc cttcgtgggt gttgaatccg cagctgtaag tactggtatg gttaaaaacc
3421 cgaaacgtac cgttccgctg gcaaccatgc tgggtactgg tttagcaggt attgtttaca
3481 tcgctgcgac tcaggtgctt tccggtatgt atccgtcttc tgtaatggcg gcttccggtg
3541 ctccgtttgc aatcagtgct tcaactatcc tcggtaactg ggctgcgccg ctggtttctg
3601 cattcaccgc ctttgcgtgc ctgacttctc tgggctcctg gatgatgttg gtaggccagg
3661 caggtgtacg tgccgctaac gacggtaact tcccgaaagt ttatggtgaa gtcgacagca
3721 acggtattcc gaaaaaaggt ctgctgctgg ctgcagtgaa aatgactgcc ctgatgatcc
3781 ttatcactct gatgaactct gccggtggta aagcatctga cctgttcggt gaactgaccg
3841 gtatcgcagt actgctgact atgctgccgt atttctactc ttgcgttgac ctgattcgtt
3901 ttgaaggcgt taacatccgc aactttgtca gcctgatctg ctctgtactg ggttgcgtgt
3961 tctgcttcat cgcgctgatg ggcgcaagct ccttcgagct ggcaggtacc ttcatcgtca
4021 gcctgattat cctgatgttc tacgctcgca aaatgcacga gcgccagagc cactcaatgg
4081 ataaccacac cgcgtctaac gcacattaat taaaagtatt ttccgaggct cctcctttca
4141 ttttgtccca tgtgttggga ggggcctttt ttacctggag atatgactat gaacgttatt
4201 gcaatattga atcacatggg ggtttatttt aaagaagaac ccatccgtga acttcatcgc
4261 gcgcttgaac gtctgaactt ccagattgtt tacccgaacg accgtgacga cttattaaaa
4321 ctgatcgaaa acaatgcgcg tctgtgcggc gttatttttg actgggataa atataatctc
4381 gagctgtgcg aagaaattag caaaatgaac gagaacctgc cgttgtacgc gttcgctaat
4441 acgtattcca ctctcgatgt aagcctgaat gacctgcgtt tacagattag cttctttgaa
4501 tatgcgctgg gtgctgctga agatattgct aataagatca agcagaccac tgacgaatat
4561 atcaacacta ttctgcctcc gctgactaaa gcactgttta aatatgttcg tgaaggtaaa
4621 tatactttct gtactcctgg tcacatgggc ggtactgcat tccagaaaag cccggtaggt
4681 agcctgttct atgatttctt tggtccgaat accatgaaat ctgatatttc catttcagta
4741 tctgaactgg gttctctgct ggatcacagt ggtccacaca aagaagcaga acagtatatc
4801 gctcgcgtct ttaacgcaga ccgcagctac atggtgacca acggtacttc cactgcgaac
4861 aaaattgttg gtatgtactc tgctccagca ggcagcacca ttctgattga ccgtaactgc
4921 cacaaatcgc tgacccacct gatgatgatg agcgatgtta cgccaatcta tttccgcccg
4981 acccgtaacg cttacggtat tcttggtggt atcccacaga gtgaattc
//