GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS CLOTOXINA 1948 bp ds-DNA BCT 27-MAY-1991
DEFINITION Clostridium difficile cdtA gene for enterotoxin A, part.
ACCESSION X17194
KEYWORDS enterotoxin; enterotoxin A; secreted protein.
SOURCE Clostridium difficile DNA.
ORGANISM Clostridium difficile
Prokaryota; Bacteria; Firmicutes; Endospore-forming rods and cocci;
Bacillaceae.
REFERENCE 1 (bases 1 to 1948)
AUTHORS Wren,B.W.
JOURNAL Unpublished (1989)
STANDARD full automatic
REFERENCE 2 (sites)
AUTHORS Wren,B.W., Clayton,C. and Tabaqchali,S.
TITLE Rapid identification of toxigenic Clostridium dificile by
polymerase chain reaction
JOURNAL Lancet 335, 423-423 (1990)
STANDARD full staff_review
COMMENT *source: strain=clinical isolate type W1.
From EMBL entry CDTOXINA; dated 19-JUN-1990.
FEATURES Location/Qualifiers
CDS <1..>1948
/note="enterotoxin A (1948 is 2nd base in codon)"
/codon_start=1
misc_feature 1..396
/note="repeating unit"
misc_feature 742..1137
/note="repeating unit"
BASE COUNT 735 a 243 c 301 g 669 t
ORIGIN
1 ataggggtgt ttaaaggacc taaaggattt gaatattttg cacctgctaa tacttataat
61 aataacatag aaggtcaggc tatagtttat caaagtaaat tcttaacttt gaatggtaaa
121 aaatattact ttgataataa ctcaaaagca gttaccggat ggcaaactat tgatagtaaa
181 aaatattact ttaatactaa cactgctgaa gcagctactg gatggcaaac tattgatggt
241 aaaaaatatt actttaatac taacactgct gaagcagcta ctggatggca aactattgat
301 ggtaaaaaat attactttaa tactaacact gctatagctt caactggtta tacaattatt
361 aatggtaaac atttttattt taatactgat ggtattatgc agataggagt gtttaaagga
421 cctaatggat ttgaatattt tgcacctgct aatacggatg ctaacaacat agaaggtcaa
481 gctatacttt accaaagtga attcttaact ttgaatggta aaaaatatta ttttgataat
541 aactcaaaag cagttaccgg atggcaaact attgatagta aaaaatatta ctttaatact
601 aacactgcta tagcttcaac tggttatact attattaatg gaaaacattt ttatttaaat
661 actgatggta ttatagcttc aactggttat acaattatta atggtaacca tttttatttt
721 aatactgatg gtattatgaa aataggggtt tttaaaggac ctaatggatt tgaatatttt
781 gcacctgcta atactgatca taataatata gaaggtcagg ctatagttta tcaaagtaaa
841 ttcttaactt tgaatggtaa aaaatattat tttgataata attcaaaagc agttactgga
901 tggcaaacta ttgatagtaa aaaatattac tttaatacta acactgctga agcagctact
961 ggatggcaaa ctattgatgg taaaaaatat tactttaata ctaacactgc tgaagcagct
1021 actggatggc aaactattga tggtaaaaaa tattacttta atactaacac tgctatagct
1081 tcaactggtt atacaattat taatggtaaa catttttatt ttaatactga tggtattatc
1141 ggagtgttta aaggacctaa tggatttgaa tattttgcac ctgctaatac tgatgctaat
1201 aacatagaag gtcaagctat agtttatcaa agtaaatttt taactttgaa tggtaaaaaa
1261 tattactttg ataataactc aaaagcagtt actggatggc atactattga tagtaaaaaa
1321 tattacttta atactaacac tgctgaagca gctactggat ggcaaactat tgatggtaaa
1381 aaatattact ttaatactaa cactgctata gcttcaactg gttatacaat taataatgga
1441 aaacattttt attttaatac tgatggtatt ataggagtgt ttaaaggacc taatggattt
1501 gaatattttg cacctgctaa tacggatgct aacaacatag aaggtcaagc tatagtttat
1561 caaagtaaat tcttaacttt gaatggtaaa aaatattatt ttgataataa ctcaaatgct
1621 gttaccggat gtcaaactat tgatagtaaa aaatattact ttaatactaa cactgctata
1681 gcttcaactg gttatacaat tattaatggt aaacattttt attttaatac tgatggtatt
1741 ataggggtgt ttaaaggtcc taatggattt gaatattttg cacctgctaa tacttatgat
1801 aataacatag aaggtcaggc tatagtttat caaagtaaat tattaacttt gaatggtaaa
1861 aaatattatt ttgataataa ctcaaaagca gttaccggat ggcaaactat tgatagtaaa
1921 aaatattact ttaatactaa cactgcag
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