GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS ECOATPXB 2500 bp ds-DNA BCT 27-MAY-1991 DEFINITION E. coli genes atpB, atpE, atPF, atpH and part of atpA. These genes code for the subunits A, C, B, delta and alpha (respectively) of the F0 subunit of ATPase. ACCESSION V00266 KEYWORDS ATPase. SOURCE Escherichia coli DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 2500) AUTHORS Nielsen,J., Hansen,F.G., Hoppe,J., Friedl,P. and Von Meyenburg,K. TITLE The nucleotide sequence of the atp genes coding for the F-0 subunits a, b, c and the F-1 subunit delta of the membrane bound ATP synthase of Escherichia coli JOURNAL Mol. Gen. Genet. 184, 33-39 (1981) STANDARD full automatic COMMENT SWISS-PROT; P00822; ATPA$ECOLI. SWISS-PROT; P00831; ATPD$ECOLI. SWISS-PROT; P00844; ATPL$ECOLI. SWISS-PROT; P00855; ATP6$ECOLI. SWISS-PROT; P00859; ATPF$ECOLI. It is not clear which one of two alternative reading frames really correspond to atpB but the second (shorter) one would provide the molecular weight observed in vivo. The other reading frames are at least partially verified by independant protein sequencing. From EMBL entry ECATPXB; dated 31-AUG-1990. FEATURES Location/Qualifiers CDS 155..967 /note="atpB ?" /codon_start=155 CDS 365..967 /note="atpB ?" /codon_start=365 CDS 1017..1253 /note="atpE" /codon_start=1017 CDS 1318..1785 /note="atpF" /codon_start=1318 CDS 1803..2333 /note="atpH" /codon_start=1803 CDS 2349..>2500 /note="atpA (2500 is 2nd base in codon)" /codon_start=2349 BASE COUNT 587 a 585 c 685 g 643 t ORIGIN 1 aagctttcaa agttctggcg atgttggtgt tactggtggt ggcgttggcg gttttaaagg 61 cggtattctt gccgctgatc gttacgtggg ttttggtgct ggtggttcag atactggcac 121 cggctgtaat taacaacaaa gggtaaaagg catcatggct tcagaaaata tgacgccgca 181 ggattacata ggacaccacc tgaataacct tcagctggac ctgcgtacat tctcgctggt 241 ggatccacaa aaccccccag ccaccttctg gacaatcaat attgactcca tgttcttctc 301 ggtggtgctg ggtctgttgt tcctggtttt attccgtagc gtagccaaaa aggcgaccag 361 cggtgtgcca ggtaagtttc agaccgcgat tgagctggtg atcggctttg ttaatggtag 421 cgtgaaagac atgtaccatg gcaaaagcaa gctgattgct ccgctggccc tgacgatctt 481 cgtctgggta ttcctgatga acctgatgga tttactgcct atcgacctgc tgccgtacat 541 tgctgaacat gtactgggtc tgcctgcact gcgtgtggtt ccgtctgcgg acgtgaacgt 601 aacgctgtct atggcactgg gcgtatttat cctgattctg ttctacagca tcaaaatgaa 661 aggcatcggc ggcttcacga aagagttgac gctgcagccg ttcaatcact gggcgttcat 721 tcctgtcaac ttaatccttg aaggggtaag cctgctgtcc aaaccagttt cactcggttt 781 gcgactgttc ggtaacatgt atgccggtga gctgattttc attctgattg ctggtctgtt 841 gccgtggtgg tcacagtgga tcctgaatgt gccgtgggcc attttccaca tcctgatcat 901 tacgctgcaa gccttcatct tcatggttct gacgatcgtc tatctgtcga tggcgtctga 961 agaacattaa tttaccaaca ctactacgtt ttaactgaaa caaactggag actgtcatgg 1021 aaaacctgaa tatggatctg ctgtacatgg ctgccgctgt gatgatgggt ctggcggcaa 1081 tcggtgctgc gatcggtatc ggcatcctcg ggggtaaatt cctggaaggc gcagcgcgtc 1141 aacctgatct gattcctctg ctgcgtactc agttctttat cgttatgggt ctggtggatg 1201 ctatcccgat gatcgctgta ggtctgggtc tgtacgtgat gttcgctgtc gcgtagtaag 1261 cgttgctttt atttaaagag caatatcaga acgttaacta aatagaggca ttgtgctgtg 1321 aatcttaacg caacaatcct cggccaggcc atcgcgtttg tcctgttcgt tctgttctgc 1381 atgaagtacg tatggccgcc attaatggca gccatcgaaa aacgtcaaaa agaaattgct 1441 gacggccttg cttccgcaga acgagcacat aaggaccttg accttgcaaa ggccagcgcg 1501 accgaccagc tgaaaaaagc gaaagcggaa gcccaggtaa tcatcgagca ggcgaacaaa 1561 cgccgctcgc agattctgga cgaagcgaaa gctgaggcag aacaggaacg tactaaaatc 1621 gtggcccagg cgcaggcgga aattgaagcc gagcgtaaac gtgcccgtga agagctgcgt 1681 aagcaagttg ctatcctggc tgttgctggc gccgagaaga tcatcgaacg ttccgtggat 1741 gaagctgcta acagcgacat cgtggataaa cttgtcgctg aactgtaagg agggaggggc 1801 tgatgtctga atttattacg gtagctcgcc cctacgccaa agcagctttt gactttgccg 1861 tcgaacacca aagtgtagaa cgctggcagg acatgctggc gtttgccgcc gaggtaacca 1921 aaaacgaaca aatggcagag cttctctctg gcgcgcttgc gccagaaacg ctcgccgagt 1981 cgtttatcgc agtttgtggt gagcaactgg acgaaaacgg tcagaacctg attcgggtta 2041 tggctgaaaa tggtcgtctt aacgcgctcc cggatgttct ggagcagttt attcacctgc 2101 gtgccgtgag tgaggctacc gctgaggtag acgtcatttc cgctgccgca ctgagtgaac 2161 aacagctcgc gaaaatttct gctgcgatgg aaaaacgtct gtcacgcaaa gttaagctga 2221 attgcaaaat cgataagtct gtaatggcag gcgttatcat ccgagcgggt gatatggtca 2281 ttgatggcag cgtacgcggt cgtcttgagc gccttgcaga cgtcttgcag tcttaagggg 2341 actggagcat gcaactgaat tccaccgaaa tcagcgaact gatcaagcag cgcattgctc 2401 agttcaatgt tgtgagtgaa gctcacaacg aaggtactat tgtttctgta agtgacggtg 2461 ttatccgcat tcacggcctg gccgattgta tgcagggtga //