GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS ECODUTPYR 2568 bp ds-DNA BCT 27-MAY-1991 DEFINITION Escherichia coli dut-pyrE gene region ACCESSION V01578 X01713 KEYWORDS UTPase; orotate phosphoribosyltransferase; unidentified reading frame. SOURCE Escherichia coli DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1456 to 2568) AUTHORS Poulsen,P., Jensen,K.F., Valentin-Hansen,P., Carlsson,P. and Lundberg,L.G. TITLE Nucleotide sequence of the Escherichia coli pyrE gene and of the DNA in front of the protein-coding region JOURNAL Eur. J. Biochem. 135, 223-229 (1983) STANDARD full automatic REFERENCE 2 (bases 1 to 1609) AUTHORS Lundberg,L.G., Thoresson,H.-O., Karlstroem,O.H. and Nyman,P.O. TITLE Nucleotide sequence of the structural gene for dUTPase of Escherichia coli K-12 JOURNAL EMBO J. 2, 967-971 (1983) STANDARD full automatic REFERENCE 3 (sites) AUTHORS Poulsen,P., Bonekamp,F. and Jensen,K.F. TITLE Structure of the Escherichia coli pyrE operon and control of pyrE expression by a UTP modulated intercistronic attentuation JOURNAL EMBO J. 3, 1783-1790 (1984) STANDARD full staff_review COMMENT SWISS-PROT; P00495; PYRE$ECOLI. SWISS-PROT; P03842; YPYE$ECOLI. SWISS-PROT; P06968; DUT$ECOLI. SWISS-PROT; P17776; LPPE$ECOLI. From EMBL entry ECDUTPYR; dated 06-JUL-1989. FEATURES Location/Qualifiers CDS 343..795 /note="dUTPase (dut)" /codon_start=343 CDS 905..1537 /note="ORF" /codon_start=905 misc_feature 1506..1529 /note="region of dyad symmetry" CDS complement(1540..2175) /note="orotate phosphoribosyltransferase (pyrE)" /codon_start=2175 RBS complement(2183..2187) /note="pot. rRNA-binding site 1" RBS complement(2202..2205) /note="pot. rRNA-binding site 2" misc_feature 2214..2235 /note="region of dyad symmetry" misc_feature 2251..2271 /note="region of dyad symmetry" promoter complement(2279..2284) /note="-10 region (P1)" promoter complement(2296..2308) /note="-35 region (P2)" RBS complement(2406..2409) /note="pot. rRNA-binding site 3" promoter complement(2429..2436) /note="-10 region (P2)" promoter complement(2450..2461) /note="-35 region (P1)" BASE COUNT 613 a 714 c 631 g 610 t ORIGIN 1 cagagaaaat caaaaagcag gccacgcagg gtgatgaatt aacaataaaa atggttaaaa 61 accccgatat cgtcgcaggc gttgccgcac taaaagacca tcgaccctac gtcgttggat 121 ttgccgccga aacaaataat gtggaagaat acgcccggca aaaacgtatc cgtaaaaacc 181 ttgatctgat ctgcgcgaac gatgtttccc agccaactca aggatttaac agcgacaaca 241 acgcattaca ccttttctgg caggacggag ataaagtctt accgcttgag cgcaaagagc 301 tccttggcca attattactc gacgagatcg tgacccgtta tgatgaaaaa aatcgacgtt 361 aagattctgg acccgcgcgt tgggaaggaa tttccgctcc cgacttatgc cacctctggc 421 tctgccggac ttgacctgcg tgcctgtctc aacgacgccg tagaactggc tccgggtgac 481 actacgctgg ttccgaccgg gctggcgatt catattgccg atccttcact ggcggcaatg 541 atgctgccgc gctccggatt gggacataag cacggtatcg tgcttggtaa cctggtagga 601 ttgatcgatt ctgactatca gggccagttg atgatttccg tgtggaaccg tggtcaggac 661 agcttcacca ttcaacctgg cgaacgcatc gcccagatga tttttgttcc ggtagtacag 721 gctgaattta atctggtgga agatttcgac gccaccgacc gcggtgaagg cggctttggt 781 cactctggtc gtcagtaaca catacgcatc cgaataacgt cataacatag ccgcaaacat 841 ttcgtttgcg gtcatagcgt gggtgccgcc tggcaagtgc ttattttcag gggtattttg 901 taacatggca gaaaaacaaa ctgcgaaaag gaaccgtcgc gaggaaatac ttcagtctct 961 ggcgctgatg ctggaatcca gcgatggaag ccaacgtatc acgacggcaa aactggccgc 1021 ctctgtcggc gtttccgaag cggcactgta tcgccacttc cccagtaaga cccgcatgtt 1081 cgatagcctg attgagttta tcgaagatag cctgattact cgcatcaacc tgattctgaa 1141 agatgagaaa gacaccacag cgcgcctgcg tctgattgtg ttgctgcttc tcggttttgg 1201 tgagcgtaat cctggcctga cccgcatcct cactggtcat gcgctaatgt ttgaacagga 1261 tcgcctgcaa gggcgcatca accagctgtt cgagcgtatt gaagcgcagc tgcgccaggt 1321 attgcgtgaa aagagaatgc gtgagggtga aggttacacc accgatgaaa ccctgctggc 1381 aagccagatc ctggccttct gtgaaggtat gctgtcacgt tttgtccgca gcgaatttaa 1441 ataccgcccg acggatgatt ttgacgcccg ctggccgcta attgcggcca gttgcagtaa 1501 tatgacgccg gatgactttt catccggcga gtttctttaa acgccaaact cttcgcgata 1561 ggccttaacc gccgccagat gttccgccat ttccggcttc tcttccaggt aagcaatcag 1621 gtctttcagg gtgatgatag agatcacttt gcagttgtaa tcacgctcaa cttcctgaat 1681 cgccgaaatc tcgccgcgcc cgcgttcctg acgatcgagc gaaatcaaca cgccagcaag 1741 cgtcgcgcca ttggcctgaa taatctccat cgactcgcga gccgttccgg cggtgatcac 1801 atcatctacc agcattacgc gtccttgtaa cgcgctacca accagattgc cgccttcacc 1861 gtggtctttt gcttctttgc ggttaaagca gtacggcagg tccaggtcgt gatgctccgc 1921 cagtgccaca gcggttgtgg tggcaatcgg gatccctttg taagcagggc caaacagcag 1981 atcgaactca atgccggaat ccaccaacgc ttcagcgtaa aaacggccta acagtgccag 2041 atcgcgcccg gtattaaaca gcccggcgtt gaagaaatag gggcttttgc gcccggattt 2101 cagcgtaaac tcgccaaact ttaacacctg cttgctaagc gcaaattcaa taaactggcg 2161 ctgatatggt ttcatgcctt cgctcctcat cttacttttc tacagacaaa aaaaaggcga 2221 ctcatcagtc gccttaaaaa tcagtttgcc agcgccgcct tctgcgtcgc tacaatggat 2281 tcgattcccc ctcgggccag agccaacaag atgagtagct cttcatgggt gaacggctcg 2341 ccttctgccg tcccctgcac ttcaatgatg cgcccgtctt cggtcatcac tacgttcatg 2401 tcggtctctg cggcagagtc ttcaacgtat tccagatcgc aaaccgcttc gccgttcaca 2461 attccgacag aaactgcggc taccatccct ttcatcggat tggttttcag cttgccgttt 2521 tccaccagct tctgtagcgc atctaccagc gccacgcagg cacccgta //