GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS ECOFADAC 4950 bp ds-DNA BCT 27-MAY-1991 DEFINITION Escherichia coli fadB and fadA genes and DNA for ORF315 (EC 5.1.2.3,EC 5.3.3.8,EC 4.2.1.17,EC 1.1.1.35,EC 2.3.1.9) ACCESSION X52837 KEYWORDS fadA gene; fadB gene; fatty acid degredation. SOURCE Escherichia coli DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 4950) AUTHORS Nakahigashi,K. JOURNAL Unpublished (1990) STANDARD full automatic REFERENCE 2 (bases 1241 to 4950) AUTHORS Nakahigashi,K. and Inokuchi,H. TITLE Nucleotide sequence of fadB gene from Escherichia coli JOURNAL Nucleic Acids Res. 18, 4937-4937 (1990) STANDARD full automatic COMMENT *source: strain=K12 W3110; **map: map position=86min; fadB and fadA are the beta and alpha subunits of the multifunctional enzyme complex of the fatty acid degredation cycle. From EMBL entry ECFADAB; dated 30-AUG-1990. FEATURES Location/Qualifiers CDS 276..1220 /note="ORF315 (AA 1 - 315)" /codon_start=276 promoter 1266..1271 /note="-35 region" promoter 1289..1294 /note="-10 region" RBS 1492..1497 /note="ribosome binding site" CDS 1503..3689 /note="fadB gene product (AA 1 - 729)" /codon_start=1503 RBS 3692..3696 /note="ribosome binding site" CDS 3702..4862 /note="fadA gene product (AA 1 - 387)" /codon_start=3702 BASE COUNT 1114 a 1319 c 1404 g 1113 t ORIGIN 1 ccgggtcatg ttttccacgt tgttttcgtg gatcaccacg ttgtcttcga tacgaatgcc 61 gccgaacggt ttcagtgctt caattttctg ccagttgaag tgcttgctga actgcccttc 121 acgccacggt gccagtagcg attcgatgaa gtagataccc ggttcgatgg ttaacaccat 181 gcccggctgg agaatacggg tgcagcgcag gtacggatat tttgccggtg ccgcgagtgc 241 gtaccgctat catcctgcat aaaaccagcg acgtcatgca cctgcaggcc cagcggatgg 301 ccgataccat gcggcataaa cggcccggta agatcgtttt cgaccatcgc ttcttcactc 361 atatcggtga tgatttgatg tttacgcagc agtttggcga tgcgctgatg gaactggatg 421 tggtaatcca catagctgac gcctgctttc atggtggcga tcagcgccag ttgttcatca 481 ttaacgtcct tcaccagctg cgcgtagtcg ttgtcacttt ttgccgacca ggtacgggtc 541 aggtcagccg catagccgtt atattctgcc ccggcatcca gcaggaagct gcgcatctct 601 tccggtgcct gatggtccag tttggtgtaa tgcagtaccg cagcgtgttc gttaagcgcc 661 acaatgttgc tgtaaggtac gtcggtatca cgatgaccgg tcgcggtcag ataggcaatg 721 ttgatatcga actcgctcat gccagaacgg aacgcttctt ctgccgcgcg gtgaccgttg 781 accgccattt tctgcgcttc acgcatacag gccagttcgt actcagtttt gaaggagcga 841 tagtaatgca ggtagtcgat aacccctttc gggttgatgt tgctggcctc aatacccagt 901 tgcagcgcac gttccggcac cggaccgata taaccgatat tgccgcgcgc agcaggcagc 961 aggctaccaa tgccatcggc tttcggcagc gcgatcactt ccacatcttc agtccagaaa 1021 gaggtcggca gcggttcgac gttgtgccag taatcaaccg gcagatagaa ccacagtttc 1081 ggcttgttca cgccatccac cagcaaccag cagtttggca cctgagttac cggcacccac 1141 gctttgaatt gcgggttcac tttaaacgga tagggatgat cgtcgagaaa aacattgaac 1201 agctcgccgg agtgaataag taacgcatcc agcttgaagc gcgccagcgc atcgcgagtc 1261 cgttcttgta aggtagctat atgattttta tagagcgagg ccagtgattc cattttttac 1321 ccttctgttt ttttgacctt aagtctccgc atcttagcac atcgttcatc cagagcgtga 1381 tttctgccga gcgtgatcag atcggcattt ctttaatctt ttgtttgcat atttttaaca 1441 caaaatacac acttcgactc atctggtacg accagatcac cttgcggatt caggagactg 1501 acatgcttta caaaggcgac accctgtacc ttgactggct ggaagatggc attgccgaac 1561 tggtatttga tgccccaggt tcagttaata aactcgacac tgcgaccgtc gccagcctcg 1621 gcgaggccat cggcgtgctg gaacagcaat cagatctaaa agggctgctg ctgcgttcga 1681 acaaagcagc ctttatcgtc ggtgctgata tcaccgaatt tttgtccctg ttcctcgttc 1741 ctgaagaaca gttaagtcag tggctgcact ttgccaatag cgtgtttaat cgcctggaag 1801 atctgccggt gccgaccatt gctgccgtca atggctatgc gctgggcggt ggctgcgaat 1861 gcgtgctggc gaccgattat cgtctggcga cgccggatct gcgcatcggt ctgccggaaa 1921 ccaaactggg catcatgcct ggctttggcg gttctgtacg tatgccacgt atgctgggcg 1981 ctgacagtgc gctggaaatc attgccgccg gtaaagatgt cggcgcggat caggcgctga 2041 aaatcggtct ggtggatggc gtagtcaaag cagaaaaact ggttgaaggc gcaaaggcgg 2101 ttttacgcca ggccattaac ggcgacctcg actggaaagc aaaacgtcag ccgaagctgg 2161 aaccactaaa actgagcaag attgaagcca ccatgagctt caccatcgct aaagggatgg 2221 tcgcacaaac agcggggaaa cattatccgg cccccatcac cgcagtaaaa accattgaag 2281 ctgcggcccg ttttggtcgt gaagaagcct taaacctgga aaacaaaagt tttgtcccgc 2341 tggcgcatac caacgaagcc cgcgcactgg tcggcatttt ccttaacgat caatatgtaa 2401 aaggcaaagc gaagaaactc accaaagacg ttgaaacccc gaaacaggcc gcggtgctgg 2461 gtgcaggcat tatgggcggc ggcatcgctt accagtctgc gtggaaaggc gtgccggttg 2521 tcatgaaaga tatcaacgac aagtcgttaa ccctcggcat gaccgaagcc gcgaaactgc 2581 tgaacaagca gcttgagcgc ggcaagatcg atggtctgaa actggctggc gtgatctcca 2641 caatccaccc aacgctcgac tacgccggat ttgaccgcgt ggatattgtg gtagaagcgg 2701 ttgttgaaaa cccgaaagtg aaaaaagccg tactggcaga aaccgaacaa aaagtacgcc 2761 aggataccgt gctggcgtct aacacttcaa ccattcctat cagcgaactg gccaacgcgc 2821 tggaacgccc ggaaaacttc tgcgggatgc acttctttaa cccggtccac cgaatgccgt 2881 tggtagaaat tattcgcggc gagaaaagct ccgacgaaac catcgcgaaa gttgtcgcct 2941 gggcgagcaa gatgggcaag acgccgattg tggttaacga ctgccccggc ttctttgtta 3001 accgcgtgct gttcccgtat ttcgccggtt tcagccagct gctgcgcgac ggcgcggatt 3061 tccgcaagat cgacaaagtg atggaaaaac agtttggctg gccgatgggc ccggcatatc 3121 tgctggacgt tgtgggcatt gataccgcgc atcacgctca ggctgtcatg gcagcaggct 3181 tcccgcagcg gatgcagaaa gattaccgcg atgccatcga cgcgctgttt gatgccaacc 3241 gctttggtca gaagaacggc ctcggtttct ggcgttataa agaagacagc aaaggtaagc 3301 cgaagaaaga agaagacgcc gccgttgaag acctgctggc agaagtgagc cagccgaagc 3361 gcgatttcag cgaagaagag attatcgccc gcatgatgat cccgatggtc aacgaagtgg 3421 tgcgctgtct ggaggaaggc attatcgcca ctccggcgga agcggatatg gcgctggtct 3481 acggcctggg cttgcctgcg ttccacggcg gcgcgttccg ctggctggac accctcggta 3541 gcgcaaaata cctcgatatg gcacagcaat atcagcacct cggcccgctg tatgaagtgc 3601 cggaaggtct gcgtaataaa gcgcgtcata acgaaccgta ctatcctccg gttgagccag 3661 cccgtccggt tggcgacctg aaaacggctt aaggagtcac aatggaacag gttgtcattg 3721 tcgatgcaat tcgcaccccg atgggccgtt cgaagggcgg tgcttttcgt aacgtgcgtg 3781 cagaagatct ctccgctcat ttaatgcgta cgctgctggc gcgtaacccg gcgctggaag 3841 cggcggccct cgacgatatt tactggggtt gtgtgcagca gacgctggag cagggtttta 3901 atatcgcccg taacgcggcg ctgctggcag aagtaccaca ctctgtcccg gcggttaccg 3961 ttaatcgctt gtgtggttca tccatgcagg cactgcatga cgcagcacga atgatcatga 4021 ctggcgatgc gcaggcatgt ctggttggcg gcgtggggca tatgggccat gtgccgatga 4081 gtcacggcgt cgattttcac cccggcctga gccgcaatgt cgccaaagcg gcgggcatga 4141 tgggcttaac ggcagaaatg ctggcgcgta tgcacggtat cagccgtgaa atgcaggatg 4201 cctttgccgc gcggtcacac gcccgcgcct gggccgccac gcagtcggcc gcatttaaaa 4261 atgaaatcat cccgaccggt ggtcacgatg ccgacggcgt cctgaagcag tttaattacg 4321 acgaagtgat tcgcccggaa accaccgtgg aagccctcgc cacgctgcgt ccggcgtttg 4381 atccagtaaa cggtatggta acggcgggca catcttctgc actttccgat ggcgcagctg 4441 ccatgctggt gatgagtgaa agccgcgccc atgaattagg tcttaagccg cgcgctcgtg 4501 tgcgttcgat ggcggtcgtt ggttgtgacc catcgattat gggttacggc ccggttccgg 4561 cctcgaaact ggcgctgaaa aaagcggggc tttctgccag cgatatcggc gtgtttgaaa 4621 tgaacgaagc ctttgccgcg cagatcctgc catgtattaa agatctggga ctaattgagc 4681 agattgacga gaagatcaac ctcaacggtg gcgcgatcgc gctgggtcat ccgctgggtt 4741 gttccggtgc gcgtatcagc accacgctgc tgaatctgat ggaacgcaaa gacgttcagt 4801 ttggtctggc gacgatgtgt atcggtctgg gtcagggtat tgcgacggtg tttgagcggg 4861 tttaaccact tgccggatgc ggcgtgaacg ccttatccgg tctaccgatc cggcaccaat 4921 gtaggcctga taagacgcgc cagctcgcat //