GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS ECORPMH 1046 bp ds-DNA BCT 27-MAY-1991
DEFINITION E. coli rpmH gene for ribosomal protein L34
ACCESSION X01861
KEYWORDS ribosomal protein; ribosomal protein L34;
unidentified reading frame.
SOURCE Escherichia coli DNA.
ORGANISM Escherichia coli
Prokaryota; Bacteria; Gracilicutes; Scotobacteria;
Facultatively anaerobic rods; Enterobacteriaceae.
REFERENCE 1 (bases 1 to 1046)
AUTHORS Hansen,F.G., Hansen,E.B. and Atlung,T.
TITLE The nucleotide sequence of the dnaA gene promoter and of the
adjacent rpmH gene, coding for the ribosomal protein L34, of
Escherichia coli
JOURNAL EMBO J. 1, 1043-1048 (1982)
STANDARD full automatic
COMMENT SWISS-PROT; P02437; RL34$ECOLI.
From EMBL entry ECRPMH; dated 07-NOV-1985.
FEATURES Location/Qualifiers
CDS complement(<1..66)
/note="dnaA gene (aa 1-22)"
/codon_start=66
RBS complement(73..76)
/note="ribosome binding site (dnaA)"
misc_feature complement(214..219)
/note="put. transcription start region 1"
promoter complement(223..251)
/note="dnaA2p (2 put. TATA box)"
misc_feature complement(297..301)
/note="put. transcription start region 1"
promoter complement(305..335)
/note="dnaA1p (1 put. TATA box)"
promoter 370..398
/note="rpmH3p (minor TATA box)"
misc_feature 402..405
/note="minor transcription start site"
promoter 417..444
/note="rpmH1p (1 major TATA box)"
misc_feature 448..453
/note="1 major transcription start site"
promoter 542..570
/note="rpmH2p (2 major TATA box)"
CDS 553..657
/note="unidentified reading frame (aa 1-35)"
/codon_start=553
misc_feature 574..578
/note="2 major transcription start site"
RBS 659..662
/note="ribosome binding site (rpm H-L34)"
CDS 673..810
/note="L34 (rpmH) (aa 1-46)"
/codon_start=673
CDS 830..1046
/note="unidentified reading frame (aa 1-72) (1046 is 1st
base in codon)"
/codon_start=830
BASE COUNT 272 a 276 c 240 g 256 t 2 others
ORIGIN
1 gaattctgtg gctggtaact catcctgcaa tcgggcaaga cactgctgcc aaagcgaaag
61 tgacacggcg gactccactc gaacaaaagt cgataatgac taaggctgaa acattcatga
121 ttgttgacgt acgtcgaaaa gaccctgctt gagggtgacg cacgaaccgc tgtctgcggt
181 tatatgcccg atcaagatcc tgcaaaacga tcgggaccgc ggatcatagc ctaaactgcg
241 caagagatct tctgtttctc acagattttc ccgatttatc cacaggactt tccagaactc
301 gctaagtgta aacgatcctg ccgcgaggcg ggcacgattt acgccgcata ttggaaaatt
361 taatgaccat agacaaaaat tggcttaatc gatctaataa agatccagga cgatccttgc
421 gctttaccca tcagcccgta taatcctcca cccggcgcgc catgctggtt tccactggtg
481 tgaggtcgta cattttccct gcgaaaaggt gcggaaaagc gcggtaaata aggaaagaga
541 attgactccg gagtgtacaa ttattacaat ccggcctctt taatcaccca tggcttcggt
601 gtccatcgtt tcatttttcg gcggatatcc aataaagcca ttgaatttat tcaagtttag
661 gtagaaatcg ccatgaaacg cacttttcaa ccgtctgtac tgaagcgcaa ccgttctcac
721 ggcttccgtg ctcgtatggc tactaaaaat ggtcgtcagg ttctggcacg tcgtcgtgct
781 aaaggccgcg ctcgtctgac cgtttctaag taataaagct aacccctgag tggttaagct
841 cgcatttccc agggagttac gcttgttaac tcccagtcaa ttcacattcg tcttccagca
901 gccacaacgg gctggcacgc cgcaaattac cattctcggc cgcctgaatt cgctggggca
961 tccccgtatc ggtcttacgg tcgccaagaa aaacgttcga cgcgcccatg aacgcaatcg
1021 gattaaacgt ctgacgcgnn aagctt
//