GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS ECORPOI 4714 bp ds-DNA BCT 27-MAY-1991 DEFINITION E. coli genes rpoB and part of rpoC. ACCESSION V00340 KEYWORDS RNA polymerase; rpoB gene; rpoC gene. SOURCE Escherichia coli DNA. ORGANISM Escherichia coli Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 4714) AUTHORS Ovchinnikov,Y.A., Monastyrskaya,G.S., Gubanov,V.V., Guryev,S.O., Modyanov,N.N., Grinkevich,V.A., Makarova,I.A., Marchenko,T.V., Lipkin,V.M. and Sverdlov,E.D. TITLE The primary structure of Escherichia coli RNA polymerase. Nucleotide sequence of the rpoB gene and amino-acid sequence of the beta-subunit JOURNAL Eur. J. Biochem. 116, 621-629 (1981) STANDARD full automatic COMMENT SWISS-PROT; P00575; RPOB$ECOLI. SWISS-PROT; P00577; RPOC$ECOLI. From EMBL entry ECRPOI; dated 06-JUL-1989. FEATURES Location/Qualifiers CDS 82..4107 /note="coding sequence" /codon_start=82 CDS 4187..>4714 /note="coding sequence" /codon_start=4187 BASE COUNT 1188 a 1204 c 1269 g 1053 t ORIGIN 1 ttccggtcaa caaaatagtg ttgcacaaac tgtccgctca atggacagat gggtcgactt 61 gtcagcgagc tgaggaaccc tatggtttac tcctataccg agaaaaaacg tattcgtaag 121 gattttggta aacgtccaca agttctggat gtaccttatc tcctttctat ccagcttgac 181 tcgtttcaga aatttatcga gcaagatcct gaagggcagt atggtctgga agctgctttc 241 cgttccgtat tcccgattca gagctacagc ggtaattccg agctgcaata cgtcagctac 301 cgccttggcg aaccggtgtt tgacgtccag gaatgtcaaa tccgtggcgt gacctattcc 361 gcaccgctgc gcgttaaact gcgtctggtg atctatgagc gcgaagcgcc ggaaggcacc 421 gtaaaagaca ttaaagaaca agaagtctac atgggcgaaa ttccgctcat gacagacaac 481 ggtacctttg ttatcaacgg tactgagcgt gttatcgttt cccagctgca ccgtagtccg 541 ggcgtcttct ttgactccga caaaggtaaa acccactctt cgggtaaagt gctgtataac 601 gcgcgtatca tcccttaccg tggttcctgg ctggacttcg aattcgatcc gaaggacaac 661 ctgttcgtac gtatcgaccg tcgccgtaaa ctgcctgcga ccatcattct gcgcgccctg 721 aactacacca cagagcagat cctcgacctg ttctttgaaa aagttatctt tgaaatccgt 781 gataacaagc tgcagatgga actggtgccg gaacgcctgc gtggtgaaac cgcatctttt 841 gacatcgaag ctaacggtaa agtgtacgta gaaaaaggcc gccgtatcac tgcgcgccac 901 attcgccagc tggaaaaaga cgacgtcaaa ctgatcgaag tcccggttga gtacatcgca 961 ggtaaagtgg ttgctaaaga ctatattgat gagtctaccg gcgagctgat ctgcgcagcg 1021 aacatggagc tgagcctgga tctgctggct aagctgagcc agtctggtca caagcgtatc 1081 gaaacgctgt tcaccaacga tctggatcac ggcccatata tctctgaaac cttacgtgtc 1141 gacccaacta acgaccgtct gagcgcactg gtagaaatct accgcatgat gcgccctggc 1201 gagccgccga ctcgtgaagc agctgaaagc ctgttcgaga acctgttctt ctccgaagac 1261 cgttatgact tgtctgcggt tggtcgtatg aagttcaacc gttctctgct gcgcgaagaa 1321 atcgaaggtt ccggtatcct gagcaaagac gacatcattg atgttatgaa aaagctcatc 1381 gatatccgta acggtaaagg cgaagtcgat gatatcgacc acctcggcaa ccgtcgtatc 1441 cgttccgttg gcgaaatggc ggaaaaccag ttccgcgttg gcctggtacg tgtagagcgt 1501 gcggtgaaag agcgtctgtc tctgggcgat ctggataccc tgatgccaca ggatatgatc 1561 aacgccaagc cgatttccgc agcagtgaaa gagttcttcg gttccagcca gctgtctcag 1621 tttatggtcc agaacaaccc gctgtctgag attacgcaca aacgtcgtat ctccgcactc 1681 ggcccaggcg gtctgacccg tgaacgtgca ggcttcgaag ttcgagacgt acacccgact 1741 cactacggtc gcgtatgtcc aatcgaaacc cctgaaggtc cgaacatcgg tctgatcaac 1801 tctctgtccg tgtacgcaca gactaacgaa tacggcttcc ttgagactcc gtatcgtaaa 1861 gtgaccgacg gtgttgtaac tgacgaaatt cactacctgt ctgctatcga agaaggcaac 1921 tacgttatcg cccaggcgaa ctccaacttg gatgaagaag gccacttcgt agaagacctg 1981 gtaacttgcc gtagcaaagg cgaatccagc ttgttcagcc gcgaccaggt tgactacatg 2041 gacgtatcca cccagcaggt ggtatccgtc ggtgcgtccc tgatcccgtt cctggaacac 2101 gatgacgcca accgtgcatt gatgggtgcg aacatgcaac gtcaggccgt tccgactctg 2161 cgcgctgata agccgctggt tggtactggt atggaacgtg ctgttgccgt tgactccggt 2221 gtaactgcgg tagctaaacg tggtggtgtc gttcagtacg tggatgcttc ccgtatcgtt 2281 atcaaagtta acgaagacga gatgtatccg ggtgaagcag gtatcgacat ctacaacctg 2341 accaaataca cccgttctaa ccagaacacc tgtatcaacc agatgccgtg tgtgtctctg 2401 ggtgaaccgg ttgaacgtgg cgacgtgctg gcagacggtc cgtccaccga cctcggtgaa 2461 ctggcgcttg gtcagaacat gcgcgtagcg ttcatgccgt ggaatggtta caacttcgaa 2521 gactccatcc tcgtatccga gcgtgttgtt caggaagacc gtttcaccac catccacatt 2581 caggaactgg cgtgtgtgtc ccgtgacacc aagctgggtc cggaagagat caccgctgac 2641 atcccgaacg tgggtgaagc tgcgctctcc aaactggatg aatccggtat cgtttacatt 2701 ggtgcggaag tgaccggtgg cgacattctg gttggtaagg taacgccgaa aggtgaaact 2761 cagctgaccc cagaagaaaa actgctgcgt gcgatcttcg gtgagaaagc ctctgacgtt 2821 aaagactctt ctctgcgcgt accaaacggt gtatccggta cggttatcga cgttcaggtc 2881 tttactcgcg atggcgtaga aaaagacaaa cgtgcgctgg aaatcgaaga aatgcagctc 2941 aaacaggcga agaaagacct gtctgaagaa ctgcagatcc tcgaagcggg tctgttcagc 3001 cgtatccgtg ctgtgctggt agccggtggc gttgaagctg agaagctcga caaactgccg 3061 cgcgatcgct ggctggagct gggcctgaca gacgaagaga aacaaaatca gctggaacag 3121 ctggctgagc agtatgacga actgaaacac gagttcgaga agaaactcga agcgaaacgc 3181 cgcaaaatca cccagggcga cgatctggca ccgggcgtgc tgaagattgt taaggtatat 3241 ctggcggtta aacgccgtat ccagcctggt gacaagatgg caggtcgtca cggtaacaag 3301 ggtgtaattt ctaagatcaa cccgatcgaa gatatgcctt acgatgaaaa cggtacgccg 3361 gtagacatcg tactgaaccc gctgggcgta ccgtctcgta tgaacatcgg tcagatcctc 3421 gaaacccacc tgggtatggc tgcgaaaggt atcggcgaca agatcaacgc catgctgaaa 3481 cagcagcaag aagtcgcgaa actgcgcgaa ttcatccagc gtgcgtacga tctgggcgct 3541 gacgttcgtc agaaagttga cctgagtacc ttcagcgatg aagaagttat gcgtctggct 3601 gaaaacctgc gcaaaggtat gccaatcgca acgccggtgt tcgacggtgc gaaagaagca 3661 gaaattaaag agctgctgaa acttggcgac ctgccgactt ccggtcagat ccgcctgtac 3721 gatggtcgca ctggtgaaca gttcgagcgt ccggtaaccg ttggttacat gtacatgctg 3781 aaactgaacc acctggtcga cgacaagatg cacgcgcgtt ccaccggttc ttacagcctg 3841 gttactcagc agccgctggg tggtaaggca cagttcggtg gtcagcgttt cggggagatg 3901 gaagtgtggg cgctggaagc atacggcgca gcatacaccc tgcaggaaat gctcaccgtt 3961 aagtctgatg acgtgaacgg tcgtaccaag atgtataaaa acatcgtgga cggcaaccat 4021 cagatggagc cgggcatgcc agaatccttc aacgtattgt tgaaagagat tcgttcgctg 4081 ggtatcaaca tcgaactgga agacgagtaa ttctcgctca aacaggtcac tgctgtcggg 4141 ttaaaacccg gcagcggatt gtgctaactc cgacgggagc aaatccgtga aagatttatt 4201 aaagtttctg aaagcgcaga ctaaaaccga agagtttgat gcgatcaaaa ttgctctggc 4261 ttcgccagac atgatccgtt catggtcttt cggtgaagtt aaaaagccgg aaaccatcaa 4321 ctaccgtacg ttcaaaccag aacgtgacgg ccttttctgc gcccgtatct ttgggccggt 4381 aaaagattac gagtgcctgt gcggtaagta caagcgcctg aaacaccgtg gcgtcatctg 4441 tgagaagtgc ggcgttgaag tgacccagac taaagtacgc cgtgagcgta tgggccacat 4501 cgaactggct tccccgactg cgcacatctg gttcctgaaa tcgctgccgt cccgtatcgg 4561 tctgctgctc gatatgccgc tgcgcgatat cgaacgcgta ctgtactttg aatcctatgt 4621 ggttatcgaa ggcggtatga ccaacctgga acgtcagcag atcctgactg aagagcagta 4681 tctggacgcg ctggaagagt tcggtgacga attc //