GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS ECORPOI 4714 bp ds-DNA BCT 27-MAY-1991
DEFINITION E. coli genes rpoB and part of rpoC.
ACCESSION V00340
KEYWORDS RNA polymerase; rpoB gene; rpoC gene.
SOURCE Escherichia coli DNA.
ORGANISM Escherichia coli
Prokaryota; Bacteria; Gracilicutes; Scotobacteria;
Facultatively anaerobic rods; Enterobacteriaceae.
REFERENCE 1 (bases 1 to 4714)
AUTHORS Ovchinnikov,Y.A., Monastyrskaya,G.S., Gubanov,V.V., Guryev,S.O.,
Modyanov,N.N., Grinkevich,V.A., Makarova,I.A., Marchenko,T.V.,
Lipkin,V.M. and Sverdlov,E.D.
TITLE The primary structure of Escherichia coli RNA polymerase.
Nucleotide sequence of the rpoB gene and amino-acid sequence of the
beta-subunit
JOURNAL Eur. J. Biochem. 116, 621-629 (1981)
STANDARD full automatic
COMMENT SWISS-PROT; P00575; RPOB$ECOLI. SWISS-PROT; P00577; RPOC$ECOLI.
From EMBL entry ECRPOI; dated 06-JUL-1989.
FEATURES Location/Qualifiers
CDS 82..4107
/note="coding sequence"
/codon_start=82
CDS 4187..>4714
/note="coding sequence"
/codon_start=4187
BASE COUNT 1188 a 1204 c 1269 g 1053 t
ORIGIN
1 ttccggtcaa caaaatagtg ttgcacaaac tgtccgctca atggacagat gggtcgactt
61 gtcagcgagc tgaggaaccc tatggtttac tcctataccg agaaaaaacg tattcgtaag
121 gattttggta aacgtccaca agttctggat gtaccttatc tcctttctat ccagcttgac
181 tcgtttcaga aatttatcga gcaagatcct gaagggcagt atggtctgga agctgctttc
241 cgttccgtat tcccgattca gagctacagc ggtaattccg agctgcaata cgtcagctac
301 cgccttggcg aaccggtgtt tgacgtccag gaatgtcaaa tccgtggcgt gacctattcc
361 gcaccgctgc gcgttaaact gcgtctggtg atctatgagc gcgaagcgcc ggaaggcacc
421 gtaaaagaca ttaaagaaca agaagtctac atgggcgaaa ttccgctcat gacagacaac
481 ggtacctttg ttatcaacgg tactgagcgt gttatcgttt cccagctgca ccgtagtccg
541 ggcgtcttct ttgactccga caaaggtaaa acccactctt cgggtaaagt gctgtataac
601 gcgcgtatca tcccttaccg tggttcctgg ctggacttcg aattcgatcc gaaggacaac
661 ctgttcgtac gtatcgaccg tcgccgtaaa ctgcctgcga ccatcattct gcgcgccctg
721 aactacacca cagagcagat cctcgacctg ttctttgaaa aagttatctt tgaaatccgt
781 gataacaagc tgcagatgga actggtgccg gaacgcctgc gtggtgaaac cgcatctttt
841 gacatcgaag ctaacggtaa agtgtacgta gaaaaaggcc gccgtatcac tgcgcgccac
901 attcgccagc tggaaaaaga cgacgtcaaa ctgatcgaag tcccggttga gtacatcgca
961 ggtaaagtgg ttgctaaaga ctatattgat gagtctaccg gcgagctgat ctgcgcagcg
1021 aacatggagc tgagcctgga tctgctggct aagctgagcc agtctggtca caagcgtatc
1081 gaaacgctgt tcaccaacga tctggatcac ggcccatata tctctgaaac cttacgtgtc
1141 gacccaacta acgaccgtct gagcgcactg gtagaaatct accgcatgat gcgccctggc
1201 gagccgccga ctcgtgaagc agctgaaagc ctgttcgaga acctgttctt ctccgaagac
1261 cgttatgact tgtctgcggt tggtcgtatg aagttcaacc gttctctgct gcgcgaagaa
1321 atcgaaggtt ccggtatcct gagcaaagac gacatcattg atgttatgaa aaagctcatc
1381 gatatccgta acggtaaagg cgaagtcgat gatatcgacc acctcggcaa ccgtcgtatc
1441 cgttccgttg gcgaaatggc ggaaaaccag ttccgcgttg gcctggtacg tgtagagcgt
1501 gcggtgaaag agcgtctgtc tctgggcgat ctggataccc tgatgccaca ggatatgatc
1561 aacgccaagc cgatttccgc agcagtgaaa gagttcttcg gttccagcca gctgtctcag
1621 tttatggtcc agaacaaccc gctgtctgag attacgcaca aacgtcgtat ctccgcactc
1681 ggcccaggcg gtctgacccg tgaacgtgca ggcttcgaag ttcgagacgt acacccgact
1741 cactacggtc gcgtatgtcc aatcgaaacc cctgaaggtc cgaacatcgg tctgatcaac
1801 tctctgtccg tgtacgcaca gactaacgaa tacggcttcc ttgagactcc gtatcgtaaa
1861 gtgaccgacg gtgttgtaac tgacgaaatt cactacctgt ctgctatcga agaaggcaac
1921 tacgttatcg cccaggcgaa ctccaacttg gatgaagaag gccacttcgt agaagacctg
1981 gtaacttgcc gtagcaaagg cgaatccagc ttgttcagcc gcgaccaggt tgactacatg
2041 gacgtatcca cccagcaggt ggtatccgtc ggtgcgtccc tgatcccgtt cctggaacac
2101 gatgacgcca accgtgcatt gatgggtgcg aacatgcaac gtcaggccgt tccgactctg
2161 cgcgctgata agccgctggt tggtactggt atggaacgtg ctgttgccgt tgactccggt
2221 gtaactgcgg tagctaaacg tggtggtgtc gttcagtacg tggatgcttc ccgtatcgtt
2281 atcaaagtta acgaagacga gatgtatccg ggtgaagcag gtatcgacat ctacaacctg
2341 accaaataca cccgttctaa ccagaacacc tgtatcaacc agatgccgtg tgtgtctctg
2401 ggtgaaccgg ttgaacgtgg cgacgtgctg gcagacggtc cgtccaccga cctcggtgaa
2461 ctggcgcttg gtcagaacat gcgcgtagcg ttcatgccgt ggaatggtta caacttcgaa
2521 gactccatcc tcgtatccga gcgtgttgtt caggaagacc gtttcaccac catccacatt
2581 caggaactgg cgtgtgtgtc ccgtgacacc aagctgggtc cggaagagat caccgctgac
2641 atcccgaacg tgggtgaagc tgcgctctcc aaactggatg aatccggtat cgtttacatt
2701 ggtgcggaag tgaccggtgg cgacattctg gttggtaagg taacgccgaa aggtgaaact
2761 cagctgaccc cagaagaaaa actgctgcgt gcgatcttcg gtgagaaagc ctctgacgtt
2821 aaagactctt ctctgcgcgt accaaacggt gtatccggta cggttatcga cgttcaggtc
2881 tttactcgcg atggcgtaga aaaagacaaa cgtgcgctgg aaatcgaaga aatgcagctc
2941 aaacaggcga agaaagacct gtctgaagaa ctgcagatcc tcgaagcggg tctgttcagc
3001 cgtatccgtg ctgtgctggt agccggtggc gttgaagctg agaagctcga caaactgccg
3061 cgcgatcgct ggctggagct gggcctgaca gacgaagaga aacaaaatca gctggaacag
3121 ctggctgagc agtatgacga actgaaacac gagttcgaga agaaactcga agcgaaacgc
3181 cgcaaaatca cccagggcga cgatctggca ccgggcgtgc tgaagattgt taaggtatat
3241 ctggcggtta aacgccgtat ccagcctggt gacaagatgg caggtcgtca cggtaacaag
3301 ggtgtaattt ctaagatcaa cccgatcgaa gatatgcctt acgatgaaaa cggtacgccg
3361 gtagacatcg tactgaaccc gctgggcgta ccgtctcgta tgaacatcgg tcagatcctc
3421 gaaacccacc tgggtatggc tgcgaaaggt atcggcgaca agatcaacgc catgctgaaa
3481 cagcagcaag aagtcgcgaa actgcgcgaa ttcatccagc gtgcgtacga tctgggcgct
3541 gacgttcgtc agaaagttga cctgagtacc ttcagcgatg aagaagttat gcgtctggct
3601 gaaaacctgc gcaaaggtat gccaatcgca acgccggtgt tcgacggtgc gaaagaagca
3661 gaaattaaag agctgctgaa acttggcgac ctgccgactt ccggtcagat ccgcctgtac
3721 gatggtcgca ctggtgaaca gttcgagcgt ccggtaaccg ttggttacat gtacatgctg
3781 aaactgaacc acctggtcga cgacaagatg cacgcgcgtt ccaccggttc ttacagcctg
3841 gttactcagc agccgctggg tggtaaggca cagttcggtg gtcagcgttt cggggagatg
3901 gaagtgtggg cgctggaagc atacggcgca gcatacaccc tgcaggaaat gctcaccgtt
3961 aagtctgatg acgtgaacgg tcgtaccaag atgtataaaa acatcgtgga cggcaaccat
4021 cagatggagc cgggcatgcc agaatccttc aacgtattgt tgaaagagat tcgttcgctg
4081 ggtatcaaca tcgaactgga agacgagtaa ttctcgctca aacaggtcac tgctgtcggg
4141 ttaaaacccg gcagcggatt gtgctaactc cgacgggagc aaatccgtga aagatttatt
4201 aaagtttctg aaagcgcaga ctaaaaccga agagtttgat gcgatcaaaa ttgctctggc
4261 ttcgccagac atgatccgtt catggtcttt cggtgaagtt aaaaagccgg aaaccatcaa
4321 ctaccgtacg ttcaaaccag aacgtgacgg ccttttctgc gcccgtatct ttgggccggt
4381 aaaagattac gagtgcctgt gcggtaagta caagcgcctg aaacaccgtg gcgtcatctg
4441 tgagaagtgc ggcgttgaag tgacccagac taaagtacgc cgtgagcgta tgggccacat
4501 cgaactggct tccccgactg cgcacatctg gttcctgaaa tcgctgccgt cccgtatcgg
4561 tctgctgctc gatatgccgc tgcgcgatat cgaacgcgta ctgtactttg aatcctatgt
4621 ggttatcgaa ggcggtatga ccaacctgga acgtcagcag atcctgactg aagagcagta
4681 tctggacgcg ctggaagagt tcggtgacga attc
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