GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS HEIHP1ATT 636 bp ds-DNA BCT 27-MAY-1991
DEFINITION Haemophilus influenzae genes for tRNA-gly, tRNA-leu and tRNA-lys
and HP1 host attachment site
ACCESSION X53782
KEYWORDS bacteriophage attachment site; transfer RNA; transfer RNA-Gly;
transfer RNA-Leu; transfer RNA-Lys.
SOURCE Haemophilus influenzae DNA.
ORGANISM Haemophilus influenzae
Prokaryota; Bacteria; Gracilicutes; Scotobacteria;
Facultatively anaerobic rods; Pasteurellaceae.
REFERENCE 1 (bases 1 to 636)
AUTHORS Scocca,J.J.
JOURNAL Unpublished (1990)
STANDARD full automatic
REFERENCE 2 (bases 1 to 636)
AUTHORS Hauser,M.A. and Scocca,J.J.
TITLE Location of the host attachment site for phage HP1 within a cluster
of Haemophilus influenzae tRNA genes
JOURNAL Nucleic Acids Res. 18, 5305-5305 (1990)
STANDARD full automatic
COMMENT *source: strain=Rd001; clone=pHPC102 and subclones;
Data kindly reviewed (08-OCT-1990) by Scocca J.
From EMBL entry HIHP1ATT; dated 15-NOV-1990.
FEATURES Location/Qualifiers
terminator complement(125..143)
/note="pot. transcriptional terminator"
tRNA complement(161..236)
/note="tRNA-lys"
misc_feature 161..342
/note="HP1 attB/attP common core"
tRNA complement(287..373)
/note="tRNA-leu"
misc_feature 330..347
/note="HP1 attB sequence"
tRNA complement(378..453)
/note="tRNA-gly"
misc_feature 486..486
/note="transcriptional start"
promoter complement(494..499)
/note="pot. -10 region"
promoter complement(516..521)
/note="pot. -35 region"
BASE COUNT 199 a 111 c 127 g 199 t
ORIGIN
1 gaagtgattc gtgagtctat taaacgttgg aatgagcgtt aattaattaa agacgtttga
61 ttgtaaaagt ccctgattct ttgagtcggg gattttttat atgagtttca gagatttaga
121 taataaaaaa acacctttcg gtgcttactt tatttttaag tggtgggtcg tgaaggattc
181 gaaccttcga ccaacggatt aaaagtccgc tgctctaccg actgagctaa cgacccaatt
241 agatgatttt aaaataaatt ttaaaatctt tgaattggtg tttaaatggt gcccgaagcc
301 agacttgaac tggcacgcct cgaaaggcga gggattttaa atcccttgtg tctaccgatt
361 ccaccactcg ggcaaattgg agcgggaaac gaggctcgaa ctcgcgaccc cgaccttggc
421 aaggtcgtgc tctaccaact gagctattcc cgcatttatc actaatcagc actactgcgt
481 gacaacgggg cgtattttac ggatttatat attgctgtca aacgaaaaaa ataaaaaata
541 ttttatttga ttaaaaataa ctcaaatata gatggttatc ataaaaaata actgtgtttt
601 atttaatttt ataattgaat attatctagc aagctt
//