GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS NGOPIIG1 1448 bp ds-DNA BCT 27-MAY-1991 DEFINITION Neisseria gonorrhoeae gene for protein II (pFLOB1100) ACCESSION X06435 Y00550 KEYWORDS . SOURCE Neisseria gonorrhoeae DNA. ORGANISM Neisseria gonorrhoeae Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Neisseriaceae. REFERENCE 1 (bases 1 to 1448) AUTHORS Connell,T.D. JOURNAL Unpublished (1987) STANDARD full automatic REFERENCE 2 (sites) AUTHORS Connell,T.D., Black,W.J., Kawula,T.H., Barritt,D.S., Dempsey,J.A., Kverneland,K., Stephenson,A., Schepart,B.S., Murphey,G.L. and Cannon,J.G. TITLE Recombination among Protein II genes of Neisseria gonorrhoeae generates new coding sequences and increaes structural viability in the Protein II family JOURNAL Mol. Microbiol. 2, 227-236 (1988) STANDARD full staff_review COMMENT *source: strain=FA1090; clone=pFLOB1100; see also x06436-37 for further PII genes each gene probably represents a non-expressed copy of a PII gene. the atg start codon is aout-of-frame with the mat. protein; a frame shift would be consistent with the low level of PII production in E. coli clones (referring to authors). From EMBL entry NGPIIG1; dated 06-JUL-1989. FEATURES Location/Qualifiers promoter 94..99 /note="put. -35 region" promoter 117..122 /note="put. -10 region cds" CDS 187..>186 /note="put. signal peptide; see CC" /codon_start=187 CDS 311..1033 /note="put. mat. PII protein (AA 1-242)" /codon_start=311 BASE COUNT 354 a 447 c 332 g 315 t ORIGIN 1 gatccgcccg gtgcttcatc accttaggga accgttccct ttgagccggg gcggggcaac 61 ccgtaccggt ttttgttcat ccgccatatt gtgttgaaac accgcccgga acccgatata 121 atccgccctt caacatcagt gaaaatcttt ttttttaacc ggtcaaaccg atataaggag 181 ccgaaaatga atccagcccg caaaaaacct tctcttctct tctcttctct tctcttctct 241 tctcttctct tctcttctct tctcttctct tctcttctct tctcttctct tctcttcggc 301 agcgcaggcg gcaagtgaag gcaatggccg cggcccgtat gtgcaggcgg atttagccta 361 cgccgccgaa cgcattaccc acgattatcc ggaaccaacc gctccaggca aaaacaaaat 421 aagcacggta agcgattatt tcagaaacat ccgtacgcat tccatccacc ccagggtgtc 481 ggtcggctac gacttcggcg gctggaggat agcggcagat tatgcccgtt acagaaagtg 541 gaacaacagt aaatattccg tcaacacaaa aaaggtgaac gaaaacaagg gcgaaaagat 601 aaacgtgacg caatatctga aggcggaaaa tcaggaaaac ggtacgttcc acgccgtttc 661 ttctctcggc ttgtccgccg tttacgattt caaactcaac gacaaattca aaccctatat 721 cggtgcgcgc gtcgcctacg gacacgtcag acacagcatc gattcgacta aaaaaataac 781 aggtactctt accgcctacc ctagtgatgc tgacgcagca gttacggttt atcctgacgg 841 acatccgcaa aaaaacacct atcaaaaaag caacagcagc cgccgcttgg gcttcggcgc 901 gatggcgggc gtgggcatag acgtcgcgcc cggcctgacc ttggacgccg gctaccgcta 961 ccacaactgg ggacgcttgg aaaacacccg cttcaaaacc cacgaagcct cattgggcat 1021 gcgctaccgc ttctgattcc ccgataccga tgccgtctga accttcagac ggcatttttg 1081 atgcacctgc cgtttacagg cgcggggcgg gcgcggggaa atacccgaac cgtcattccc 1141 gacaataccg caatctcgaa acccgtcatt cccgcgcagg cgaaatccgg acctgtccgc 1201 acggaaactt atcggataaa acggttgccc aaaccccgcg tcctagattc ccacttccgt 1261 gggaatgacg gttcggttgc tacggcccgc tgattccccg acaccgatgc cgtctgaacc 1321 ttcagacggt catttttgat gcgctcgccg tttacaggcg cggggcgggc gcagtaaaat 1381 acccgaaccg tcatccccga caacaccgta atctcgaaac ccgtcattcc cgcgcaggcg 1441 ggaatcta //
GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS NGOPIIG2 1329 bp ds-DNA BCT 27-MAY-1991 DEFINITION Neisseria gonorrhoeae gene for protein II (pFLOB709) ACCESSION X06436 Y00550 KEYWORDS . SOURCE Neisseria gonorrhoeae DNA. ORGANISM Neisseria gonorrhoeae Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Neisseriaceae. REFERENCE 1 (bases 1 to 1329) AUTHORS Connell,T.D. JOURNAL Unpublished (1987) STANDARD full automatic REFERENCE 2 (sites) AUTHORS Connell,T.D., Black,W.J., Kawula,T.H., Barritt,D.S., Dempsey,J.A., Kverneland,K., Stephenson,A., Schepart,B.S., Murphey,G.L. and Cannon,J.G. TITLE Recombination among Protein II genes of Neisseria gonorrhoeae generates new coding sequences and increaes structural viability in the Protein II family JOURNAL Mol. Microbiol. 2, 227-236 (1988) STANDARD full staff_review COMMENT *source: strain=FA1090; clone=pFLOB709; see also x06435, x06437 for further PII genes each gene probably represents a non-expressed copy of a PII gene. the atg start codon is aout-of-frame with the mat. protein; a frame shift would be consistent with the low level of PII production in E. coli clones (referring to authors). From EMBL entry NGPIIG2; dated 06-JUL-1989. FEATURES Location/Qualifiers promoter 348..353 /note="put. -35 region" promoter 373..378 /note="put. -10 region cds" CDS 441..>440 /note="put. signal peptide; see CC" /codon_start=441 CDS 550..1266 /note="mat. PII protein (AA 1-240)" /codon_start=550 BASE COUNT 335 a 376 c 317 g 299 t 2 others ORIGIN 1 gatctagatt cccgcctgcg cggaatgacg ggtttcgaga ttgcggtgtt gtcgggaatg 61 atggaaaatg gcgggaattg tgtaaaaaat gccgtctgaa accgttggaa gcatcgtaaa 121 cgttggagtc gatgaatcgg tgggcttcag tccgccattc ccatcaatcc aacatttcta 181 ccgttttcat cgaatccatc gaatccgccc ctttcgacaa tctgacccta tgcaaccgaa 241 ccgtcattcc cacggaagtg ggaatctagg acgcggggtt tcagtcattt ccgatagatt 301 cgccgaacgc gcgaaacgna caaaaangca gcaggcgcgg tgctatgtgt tgaaacaccg 361 cccggaaccc gatataatcc gcctttgaag catcagtgaa aatctttttt taaccggtca 421 aaccgaataa ggagccgaaa atgaatccag cccgcaaaaa accttctctt ctcttctctt 481 ctcttctctt ctcttctctt ctcttctctt ctcttctctt ctcttctctt ctcttcggca 541 gcgcaggcgg caagtgaaga cggcggccgc ggcccgtatg tgcaggcgga tttagcctac 601 gccgccgaac gcattaccca cgattatccg gaaccaaccg gtgcaaaaaa aggcaaaata 661 agcacggtaa gcgattattt cagaaacatc cgtacgcatt ccatccaccc cagggtgtcg 721 gtcggctacg acttcggcgg ctggaggata gcggcagatt atgcccgtta cagaaagtgg 781 aacaacagta aatattccgt caacacaaaa aaggtgaacg aaaacaaggg cgaaaagata 841 aacgtgacgc aatatctgaa ggcggaaaat caggaaaacg gtacgttcca cgccgtttct 901 tctctcggct tgtccgccgt ttacgatttc aaactcaacg acaaattcaa accctatatc 961 ggcatgcgcg tcggctacgg gcacgtcaga catcaggttc gttcggttga acaagaaacc 1021 acgactgtta ccacttacct acagagtggt aagccaagtc ctatcgtacg aggttcgacc 1081 ctcaaacttc cccatcacga aagccgcagc agccgccgct tgggcttcgg cgcgatggcg 1141 ggcgtgggca tagacgtcgc gcccggtctg accttggacg ccggctaccg ctaccactat 1201 tggggacgcc tggaaaacac ccgcttcaaa acccacgaag cctcgttggg cgtgcgctac 1261 cgcttctgat tccccgatac cgatgccgtc tcaaccttca gacggcattt ttgatgcacc 1321 tgccgttta //
GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS NGOPIIG3 1912 bp ds-DNA BCT 27-MAY-1991 DEFINITION Neisseria gonorrhoeae gene for protein II (pFLOB210) ACCESSION X06437 Y00550 KEYWORDS . SOURCE Neisseria gonorrhoeae DNA. ORGANISM Neisseria gonorrhoeae Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Neisseriaceae. REFERENCE 1 (bases 1 to 1912) AUTHORS Connell,T.D. JOURNAL Unpublished (1987) STANDARD full automatic REFERENCE 2 (sites) AUTHORS Connell,T.D., Black,W.J., Kawula,T.H., Barritt,D.S., Dempsey,J.A., Kverneland,K., Stephenson,A., Schepart,B.S., Murphey,G.L. and Cannon,J.G. TITLE Recombination among Protein II genes of Neisseria gonorrhoeae generates new coding sequences and increaes structural viability in the Protein II family JOURNAL Mol. Microbiol. 2, 227-236 (1988) STANDARD full staff_review COMMENT *source: strain=FA1090; clone=pFLOB210; see also x06435-36 for further PII genes each gene probably represents a non-expressed copy of a PII gene. the atg start codon is aout-of-frame with the mat. protein; a frame shift would be consistent with the low level of PII production in E. coli clones (referring to authors). From EMBL entry NGPIIG3; dated 06-JUL-1989. FEATURES Location/Qualifiers promoter 185..190 /note="put. -35 region" promoter 208..213 /note="put. -10 region cds" CDS 275..>274 /note="put. signal peptide; see CC" /codon_start=275 CDS 383..1117 /note="mat. PII protein (AA 1-245)" /codon_start=383 BASE COUNT 470 a 570 c 440 g 424 t 8 others ORIGIN 1 gatcaacccg ggcggcttgt cttttaaggg tttgcaaggc gggcggggtc gtccgttccg 61 gtggaaataa tatatcgatt gcgcttcaag gccctgcatg tgcctcattg ccacccgttt 121 aaacacggtt tttatctgac aggcgcgcaa tccgccccct catttgttaa tccgccatat 181 tgtattgaaa caccgcccgg aacccgatat aatccgccct tcaacatcag tgaaaatctt 241 tttttaaccg gttaaaccga ataaggagcc gaaaatgaat ccagcccgca aaaaaccttc 301 tcttctcttc tcttctcttc tcttctcttc tcttctcttc tcttctcttc tcttctcttc 361 tcttctcttc ggcagcgcag gcgcaagtga aggcaatggc cgcggcccgt atgtgcaggc 421 ggatttagcc tacgccgccg aacgcattac ccacgattat ccggaaccaa ccgctccagg 481 caaaaacaaa ataagcacgg taagcgatta tttcagaaac atccgtacgc attccatcca 541 ccccagggtg tcggtcggct acgacttcgg cggctggcgc atcgccgcgg attatgcccg 601 ttacaggaaa tggcacaaca ataaatattc cgtgaacata aaagagttgg aaagaaagaa 661 taataaaact tttggcggca accagcttaa cataaaatac caaaagacgg aacatcagga 721 aaacggcaca ttccacgccg tttcttctct cggcttgtcc gccgtttacg atttcaaact 781 caacgacaaa ttcaaaccct atatcggtgc gcgcgtcgcc tacggacacg tcagacacag 841 catcgattcg actaaaaaaa taacaggtac tcttaccgcc taccctagtg atgctgacgc 901 agcagttacg gtttatcctg acggacatcc gcaaaaaaac acctatcaaa aaagcaacag 961 cagccgccgc ttgggcttcg gcgcgatggc gggcgtgggc atagacgtcg cgcccggcct 1021 gaccttggac gccggctacc gctaccacaa ctggggacgc ttggaaaaca cccgcttcaa 1081 aacccacgaa gcctcgttgg gcatgcgcta ccgcttctga ttccccgata ccgatgccgt 1141 ctgaaccttc agacggcatt tttaatcgcc cgccgtttac aggcgcgggg cgggcgcagt 1201 aaaatacccg aaccgtcatt cccgacaaca ccgcaatctc gaaattcgtc attcccgcgc 1261 aggcgggaat ccggacctgt ccgcacggaa acttatcgga taaaacggtt gcccaaaccc 1321 cgccgtcctt annnnnncnn ttccgtggga atgacggttc agttgcatag ggccgggtgg 1381 tcgaaagagg cggattcgat ggattcgatg aaaacggtag aaatgttgga ttgatgggaa 1441 tggcggactg aagcccaccg attcatcgac tccaacgttt acgatgcttc caacggtttc 1501 agacggcatt ttttacacaa ttcccgccat tttccatcat tcccgacaac accgcaatct 1561 cgaaacccgt catttccgac aacaccgcaa tcttgaaatt cgtcattccc gataacaccg 1621 caatctcgaa acccgtcatt cccgcgcagg cgggaatcca gacccccgac gcggcgggaa 1681 tctatcggaa atgactgaaa ccccgcgtcc tagattccca cttccgtggg aatgacggtt 1741 cggttgctac ggcccgctga ttccccgaca ccgatgccgt ctgaaccttc agacggcatc 1801 caaaacccgg tgtttcaagg cgggcaggcg gttgcggacg ctgttcaggc ggttggcatc 1861 gatgtctgcc gtaacgatgc cttcgccttc gggtaatacg tccaacacgt cg //