GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS NGOPIB 1357 bp ds-DNA BCT 27-MAY-1991 DEFINITION N.gonorrhoeae por gene for outer membrane protein PIB ACCESSION X52823 KEYWORDS PIB protein; outer membrane protein; porin. SOURCE Neisseria gonorrhoeae DNA. ORGANISM Neisseria gonorrhoeae Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Neisseriaceae. REFERENCE 1 (bases 1 to 1357) AUTHORS Heckels,J.E. JOURNAL Unpublished (1990) STANDARD full automatic REFERENCE 2 (bases 1 to 1357) AUTHORS Butt,N.J., Lambden,P.R. and Heckels,J.E. TITLE The nucleotide sequence of the por gene from Neisseria gonorrhoeae P9 encoding expression of the outer membrane protein PIB JOURNAL Nucleic Acids Res. 18, 4258-4258 (1990) STANDARD full automatic COMMENT *source: strain=P9, serovar IB-26; From EMBL entry NGPIB; dated 26-JUL-1990. FEATURES Location/Qualifiers RBS 8..11 /note="ribosome binding site" CDS 20..1063 /note="precursor protein (AA -19 to 329)" /codon_start=20 CDS 20..76 /note="signal peptide (AA -19 to -1)" /codon_start=20 CDS 77..1063 /note="mature PIB protein (AA 1-329)" /codon_start=77 misc_feature 1113..1238 /note="heptameric TTTTCTG repeats" misc_feature 1239..1357 /note="heptameric TTTTCTG repeats" BASE COUNT 308 a 361 c 303 g 385 t ORIGIN 1 ccaaaaaagg aatacagcaa tgaaaaaatc cctgattgcc ctgactttgg cagcccttcc 61 tgttgcggca acggccgatg tcaccctgta cggtgccatc aaagccggcg tacaaactta 121 ccgttctgta gaacatacag acggcaaggt aagtaaagtg gaaaccggca gcgaaatcgc 181 cgacttcggt tcaaaaatcg gcttcaaagg ccaagaagac ctcggcaacg gtctgaaggc 241 cgtttggcag ttggaacaag gtgcctccgt cgccggcact aacaccggct ggggcaacaa 301 acaatccttc gtcggcttga agggcggctt cggtaccatc cgcgccggta gcctgaacag 361 ccccctgaaa aacaccgacg ccaacgtcaa tgcttgggaa tccggcaaat ttaccggcaa 421 tgtgctggaa atcagcggaa tggccaaacg ggaacaccgc tacctgtccg tacgctacga 481 ttctcccgaa tttgccggct tcagcggcag cgtacaatac gcacctaaag acaattcagg 541 ctcaaacggc gaatcttacc acgttggctt gaactaccaa aacagcggct tcttcgcaca 601 atacgccggc ttgttccaaa gatacggcga aggcactaaa aaaatcgaat acgaacatca 661 agtttatagt atccccagcc tgtttgttga aaaactgcaa gttcaccgtt tggtaggcgg 721 ttacgacaat aatgccctgt acgtttccgt agccgcgcaa caacaagatg ccaaattgta 781 tggagcaagg agggctaatt cgcacaactc tcaaaccgaa gttgccgcta ccgcggcata 841 ccgtttcggc aatgtaacgc cccgcgtttc ttacgcccac ggcttcaaag gcactgttga 901 tagtgcagac cacgacaata cttatgacca agtggttgtc ggtgcggaat acgacttctc 961 caaacgcact tctgccttgg tttctgccgg ctggttgcaa gaaggcaaag gcgcagacaa 1021 aatcgtatcg actgccagcg ccgtcgttct gcgccacaaa ttctaatctg caaagattgg 1081 tatcaacaaa aagcctgtcg tcagacaggc ttttttctgt tttctgtttt ctgttttctg 1141 ttttctgttt tctgttttct gttttctgtt ttctgttttc tgttttctgt tttctgtttt 1201 ctgttttctg ttttctgttt tctgttttct gttttctgtt ttccgttttc cgttttccgt 1261 tttccgtttt ccgttttccg ttttccgttt tccgttttcc gttttccgtt ttccgttttc 1321 cgttttccgt tttccgtttt ccgttttccg ttttccg //
GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS NGOPOR50 216 bp ds-DNA BCT 27-MAY-1991 DEFINITION N.gonorrhoeae por gene for outer membrane protein PIB (partial) (strain SU50) ACCESSION X52824 KEYWORDS PIB protein; outer membrane protein; por gene. SOURCE Neisseria gonorrhoeae DNA. ORGANISM Neisseria gonorrhoeae Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Neisseriaceae. REFERENCE 1 (bases 1 to 216; 1 to 216) AUTHORS Heckels,J.E. JOURNAL Unpublished (1990) STANDARD full automatic COMMENT *source: strain=SU50, serovar IB-2; See also <X52824> to <X52827> for other PIB proteins. From EMBL entry NGPOR50; dated 30-JUL-1990. FEATURES Location/Qualifiers CDS <1..>216 /note="outer membrane protein PIB (partial) (72 AA)" /codon_start=1 BASE COUNT 68 a 54 c 44 g 50 t ORIGIN 1 caatacgccg gcttgttcca aagatacggc gaaggcacta aaaaaatcga atacgatagt 61 caatattata gtatccccag cctgtttgtt gaaaaactgc aagttcaccg tttggtcggc 121 ggttacgaca ataatgccct gtacgcctcc gtagccgcac aacaacaaga tgccaaattg 181 tatggaacat ggcgtgctaa ttcgcacaac tctcaa //
GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS NGOPOR75 216 bp ds-DNA BCT 27-MAY-1991 DEFINITION N.gonorrhoeae por gene for outer membrane protein PIB (partial) (strain SU75) ACCESSION X52827 KEYWORDS PIB protein; outer membrane protein; por gene. SOURCE Neisseria gonorrhoeae DNA. ORGANISM Neisseria gonorrhoeae Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Neisseriaceae. REFERENCE 1 (bases 1 to 216; 1 to 216) AUTHORS Heckels,J.E. JOURNAL Unpublished (1990) STANDARD full automatic COMMENT *source: strain=SU75, serovar IB-8; See <X52824> to <X52827> for other PIB proteins From EMBL entry NGPOR75; dated 30-JUL-1990. FEATURES Location/Qualifiers CDS <1..>216 /note="outer membrane protein PIB (partial) (72 AA)" /codon_start=1 BASE COUNT 73 a 50 c 42 g 51 t ORIGIN 1 caatacgccg gcttgttcca aagatacggc gaaggcacta aaaaaatgga aggatataca 61 tataatatcc ccagtttgtt tgttgaaaaa ctgcaagttc accgtttggt cggcggttac 121 gacaataatg ccctgtacgc ctccgtagcc gcacaacaac aagatgccaa attgtatcaa 181 aatcaaatag tgcgtgataa ttcgcacaac tctcaa //
GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS NGOPOR85 216 bp ds-DNA BCT 27-MAY-1991 DEFINITION N.gonorrhoeae por gene for outer membrane protein PIB (partial) (strain SU85) ACCESSION X52826 KEYWORDS PIB protein; outer membrane protein; por gene. SOURCE Neisseria gonorrhoeae DNA. ORGANISM Neisseria gonorrhoeae Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Neisseriaceae. REFERENCE 1 (bases 1 to 216; 1 to 216) AUTHORS Heckels,J.E. JOURNAL Unpublished (1990) STANDARD full automatic COMMENT *source: strain=SU85, serovar IB-3; See <X52824> to <X52827> for other PIB proteins From EMBL entry NGPOR85; dated 30-JUL-1990. FEATURES Location/Qualifiers CDS <1..>216 /note="outer membrane protein PIB (partial) (72 AA)" /codon_start=1 BASE COUNT 69 a 49 c 46 g 52 t ORIGIN 1 caatacgccg gcttgttcca aagatacggc gaaggcacta aaaaaatcga atacgatgat 61 caagtttata gtatccccag tctgtttgtt gaaaaactgc aagttcaccg tttggtaggc 121 ggttacgaca ataatgccct gtacgtttcc gtagccgcac aacaacaaga tgccaaattg 181 tatggagcaa tgagcggtaa ttcgcacaac tctcaa //
GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS NGOPOR97 222 bp ds-DNA BCT 27-MAY-1991 DEFINITION N.gonorrhoeae por gene for outer membrane protein PIB (partial) (strain SU97) ACCESSION X52825 KEYWORDS PIB protein; outer membrane protein; por gene. SOURCE Neisseria gonorrhoeae DNA. ORGANISM Neisseria gonorrhoeae Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Neisseriaceae. REFERENCE 1 (bases 1 to 222; 1 to 222) AUTHORS Heckels,J.E. JOURNAL Unpublished (1990) STANDARD full automatic COMMENT *source: strain=SU97, serovar IB-2; See <X52824> to <X52827> for other PIB proteins From EMBL entry NGPOR97; dated 30-JUL-1990. FEATURES Location/Qualifiers CDS <1..>222 /note="outer membrane protein PIB (partial) (74 AA)" /codon_start=1 BASE COUNT 73 a 53 c 42 g 54 t ORIGIN 1 caatacgccg gcttgttcca aagatacggc gaaggcacta aaaaattcga atacgaatat 61 caagcttata gtatccccag cctgtttgtt gaaaaactgc aagttcaccg tttggtaggc 121 ggttacgaca ataatgccct gtacgcctcc gtagccgtac aacaacaaga tgccaaattg 181 tatcaaaatc aattagtgcg tgataattcg cacaactctc aa //