GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS HAMIAPLTR 349 bp ds-DNA ROD 27-MAY-1991
DEFINITION Chinese hamster intracisternal A particle 5' LTR
ACCESSION X52271
KEYWORDS IAP gene family; endogenous retrovirus; regulatory element;
transcriptional regulation.
SOURCE Cricetulus griseus DNA.
ORGANISM Cricetulus griseus
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Rodentia; Myomorpha; Cricetidae; Cricetinae;
Cricetini.
REFERENCE 1 (bases 1 to 349; 1 to 349)
AUTHORS Emanoil-Ravier,M.S.
JOURNAL Unpublished (1990)
STANDARD full automatic
COMMENT *source: developmental stage=adult; tissue=ovary; *source:
haplotype= 24=22; cell type=fibroblast; cell line=CHO; *source:
library=EMBL 3; clone=X J18 349 pb; See <X07947> for overlapping
sequence.
From EMBL entry CGIAPLTR; dated 04-JUL-1990.
FEATURES Location/Qualifiers
repeat_region 1..348
/note="long terminal repeat LTR"
misc_feature 1..246
/note="U3 region"
misc_feature 26..34
/note="SP1 binding site"
misc_feature 36..42
/note="degenerate glucocorticoid responsive element (GRE)"
misc_feature 118..123
/note="AP1 binding site"
misc_feature 140..146
/note="SV40-like core enhancer"
promoter 168..172
/note="CAT box"
promoter 211..217
/note="TATA box"
misc_feature 247..297
/note="R region"
misc_feature 274..279
/note="degenerate GRE element"
misc_feature 283..288
/note="polyA signal"
misc_feature 298..348
/note="U5 region"
misc_feature 312..318
/note="degenerate GRE element"
BASE COUNT 79 a 85 c 80 g 105 t
ORIGIN
1 tgtgaggagc cgccctcgct atcgctattg ccgttagaag atgcgctcac atccactgca
61 ggagttaact gtctgtctgt ctgtctgtca gttactgtcg gtgtcagtta gagttaatga
121 gtatgtgagt acctgttccg tttaaacgtc tccgtctctc caaaccacca atccgggtct
181 ctacacacat ctagtgggac ctcctaggct tatataaggg gctgggtttc ttagcttggg
241 gtctcatgct aagaagctca tcatctatct ctcaaagatt ccattaaaga tttactcaag
301 aaggatccga gtgttccatg tatttcttgc cacatatagc gcgggacag
//