GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS MUSCOL1A11 3992 bp ds-DNA ROD 27-MAY-1991
DEFINITION Murine COL1A1 gene for alpha-1 type I collagen, exons 1-5
ACCESSION X54876
KEYWORDS collagen; collagen type I.
SOURCE Mus musculus DNA.
ORGANISM Mus musculus
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE 1 (bases 1 to 3992)
AUTHORS Breindl,M.J.
JOURNAL Unpublished (1990)
STANDARD full automatic
COMMENT *source: tissue=liver; strain=C57BL/6 See also K01688.
From EMBL entry MMCOL1A11; dated 24-JAN-1991.
FEATURES Location/Qualifiers
mat_peptide join(1745..1820,3284..3478,3601..3632,3752..3787,
3878..3980)
/partial
/product="alpha 1 type I collagen"
/gene="COL1A1"
mRNA join(1628..1820,3284..3478,3601..3632,3752..3787,
3878..3980)
/partial
/gene="COL1A1"
/evidence=EXPERIMENTAL
CDS join(1745..1820,3284..3478,3601..3632,3752..3787,
3878..3980)
/partial
/product="alpha 1 type I collagen"
/gene="COL1A1"
/codon_start=1745
TATA_signal 1601..1606
exon 1628..1820
/number=1
prim_transcript 1628..>3922
/gene="COL1A1"
/evidence=EXPERIMENTAL
exon 1628..1820
intron 1821..3283
/number=1
exon 3284..3478
/number=2
exon 3284..3478
exon 3284..3478
exon 3284..3478
intron 3479..3600
/number=2
exon 3601..3632
/number=3
exon 3601..3632
exon 3601..3632
exon 3601..3632
intron 3633..3751
/number=3
exon 3752..3787
/number=4
exon 3752..3787
exon 3752..3787
exon 3752..3787
intron 3788..3877
/number=4
exon 3878..3980
/number=5
exon 3878..3980
exon 3878..3980
exon 3878..3980
intron 3981..>3992
/number=5
BASE COUNT 916 a 1080 c 1067 g 929 t
ORIGIN
1 ctgcagtctc cctccgccac cccacccgca ctgctcggcc tagctgccca cgcgcagcga
61 cgtgctccct ccccttctgt tcccttggtc tttttttttt ttccctttgc cttcgttgca
121 caaaactagc tcagggaggg cgtgaagggg ggggggggag caatggaatc ttggatggtt
181 tggaggaggc gggactccct gcttccacgt ttacagctct aaagaagccg gtgggggaag
241 tgatacagga tgtctatggg ccctgcaagg agaccccagt gccttcccac accacccaca
301 cagtttgaca agatgaagtt cctaagcaga ttggacagag cacctttgca gggtgcaggg
361 agcaccgggg aagaacggac actgtctttt agcgacaact ttaaatataa gctgctgttc
421 ttgggggact acagatgacc ctttcctgac ggcagaggtg gggagcaatg gccaagattt
481 tcagcaaaga agtgaggaca tgggaagaaa ccattaaata aagtccctca gctaccaaac
541 acaagtttct gccacacact gagttcacct aggtgtcccc agaccacatc caagtacaat
601 tagaaaagag ggctctctgt agctttgaga acacccctct atggccaagt accttctacc
661 tgttcattct gcattgatat tgctacataa gagggcctct aacaaatctc tggctgtggc
721 cacagctgac acaagacctt tttctaaaac atccctggtc acaggcttcc tgcaacaaac
781 tcacatccca gtgctgggat ggaggaggtc agagaagaat ttatacaaca tgccccaggc
841 cccagctttg aggacccaga aagccccctg cccacactgc tgctcatcac ttaatgcata
901 agcattcttc tggaaggaca aggatgtcaa aggtctcccc aagcctcagc ctcagagctg
961 ttatttatta gaaaggtgtg tctggcatgg cagaacagat aggcaccccc ttcctttcaa
1021 accaccacat atctgactct tagtatctgt gaagagatgt ataactgttc acaaatattc
1081 ctaccctcca ttcctgggtc cacaccatga ggtgatcccc tccctccaac aggcacatct
1141 gcttagctga taggttctaa tcagattaat ctaacttatt ccttagttct tccccaggat
1201 gcctgaaaga ttactagcat ggccaggagg accttttccc aattattcct gacactgatc
1261 cctttgtagt gtttcccaac tcagattctc agttctacat ccttctgatt tgaagtccca
1321 gaaagaaagt acaaggggta ttctctaccc acactcagta tactgagggc ccagccacac
1381 tccagtgaca gcacctctgg cccatgtaga tctggggggc aagggcggca gagttgcggg
1441 agggggggcg ctgggtggac tcctttccct tcctttccct cctcccccct cttcgttcca
1501 aattgggggc cgggccaggc agttctgatt ggctgggggc cgggctgctg gctccccctc
1561 tccgagaggc agggttcctc ccagctctcc atcaagatgg tataaaaggg gcccagccag
1621 tcgtcggagc agacgggagt ttctcctcgg gacggagcag gaggcacgcg gagtgaggcc
1681 acgcatgagc cgaagctaac cccccacccc agccgcaaag agtctacatg tctagggtct
1741 agacatgttc agctttgtgg acctccggct cctgctcctc ttaggggcca ctgccctcct
1801 gacgcatggc caagaagaca gtaagttcca aactctgggg agtttactac agcttcttgg
1861 tattgcgttc tgtatagagg ggtcctagca gataagactt aaatggaggt gcagggctgc
1921 tccagaggca gggatgggac ggtgatggag aggaaacggg atgagagagg tcaccctgct
1981 gagcagtgag gggagcagtt ctcagaagtg gagccttgca tgagatggcc caggaagaaa
2041 tttcaagcac ccatctgtag cacaacagga aaagtgggaa tctggacacg ggttggggca
2101 gagtacgtcg aaaatgaaat aaggcctctg gaatagagat tcggagctca agatgtaaaa
2161 gctatcaaaa aggctgcggg atgattcata aggaaagatt gtttgccctc tctgcaggct
2221 agacagtgtt gctggggcct ccggggtgct gggctctcgg ggggggggga ggggacgcac
2281 ggagagggcg ggttgctgga tgagaaagtt tggctaggac ttgactgggc gcggtccctg
2341 tgcctcctgc tggccagccg agagcactac gagtcctggt acagcacttt acagcgcaca
2401 ggctgagaag gaaaacctgg gttattgcgg accctcatct ccagactagg aaaataaaag
2461 cagggatgga tggggtagct ctggtctttg aaagaagtga cccaggccga gtaaaagtcg
2521 gtccgcccct gcattgctta gttttgcccg ccacctagtg gttgccttga tcaggtcctg
2581 gagcggtggg cgtggttaac tcatcattac tatttgtaga cttgacttct ttggctaagg
2641 agattccaaa gcactactgg ctttgaagga cccggcttgt ctagttagca agttttcaag
2701 attcctggga gctggaaatt gggatgtatc taactttagg gatacatttt actacactgg
2761 acagggctcc actgaaatca gcccctccac attgtagccc cgcccattcc gccccacctg
2821 ccccgggaaa ggaggtggga ccagggctga atttcccctt ctctcctccc acccccgcct
2881 cctgtctccg cgcaaaccac gtcccacgag cccccaccta ctgcgtagga gccctcctac
2941 tctccttcag caggcttttt tatttcattt ggttcccgcg cggctgggct gaagttgttt
3001 ggaagaaacc ccagtctaga gctttgttta aattcctgag aactgggacg ttatagtcct
3061 ggccaggcgc cctggtgctg tcactgaacg tcgccgatat ggagcagacc tgcatttaag
3121 gatttgaggg aagaatatag ggagtggggg gaaagattca ggaagtggga agtctccgtg
3181 cgcctcttag acagggcaaa gagtgagtaa ggctgggatc cctggtgctc cggggtaagg
3241 tctctgaccc gcacacatcc tgtgtctctt cccatttgct cagtccctga agtcagctgc
3301 atacacaatg gcctaagggt ccccaatggt gagacgtgga aacccgaggt atgcttgatc
3361 tgtatctgcc acaatggcac ggctgtgtgc gatgacgtgc aatgcaatga agaactggac
3421 tgtcccaacc cccaaagacg ggagggcgag tgctgtgctt tctgcccgga agaatacggt
3481 acggttctgg tcctagggtt aagggaggtt ggagtccctc cctcgcctat gtcttgaaag
3541 cctataacac ccccaggtac cttagtaaat ttacttctaa ctgaacgttt ttctccccag
3601 tatcaccaaa ctcagaagat gtaggagtcg aggtaataat ctgctcccta ctttgctccc
3661 acccgtgcac gacccccact gtcctccaat aaactgcagt tttctttgct tctcttaacg
3721 gccttttgtt tcttcatcct caaccccaca gggacccaag ggagaccctg gcccccaagg
3781 cccaagggta agcatggtat tctaaatgag ctgggaaact ggagggggcg tggctctgat
3841 ttgtgctcat agcagccccc tccgtctctt gggtgcaggg acccgttggc ccccctggac
3901 gagatggcat ccctggacag cctggacttc ctggtcctcc tggtccccct gggccccccg
3961 gaccccctgg ccttggagga gtaagtagat ct
//