GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS MUSH2KB 5709 bp ds-DNA ROD 27-MAY-1991
DEFINITION Mouse pseudogene for the transplantation antigen complex H-2 K B.
ACCESSION V00748
KEYWORDS germline; pseudogene.
SOURCE Mus musculus DNA.
ORGANISM Mus musculus
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE 1 (bases 1 to 5709)
AUTHORS Steinmetz,M., Moore,K.W., Frelinger,J.G., Sher,B.T., Shen,F.-W.,
Boyse,E.A. and Hood,L.
TITLE A pseudogene homologous to mouse transplantation antigens:
transplantation antigens are encoded by eight exons that correlate
with protein domains
JOURNAL Cell 25, 683-692 (1981)
STANDARD full automatic
COMMENT SWISS-PROT; P14429; HA17$MOUSE.
From EMBL entry MMH2KB; dated 06-JUL-1989.
FEATURES Location/Qualifiers
mRNA <5233..5232
/note="messenger RNA"
CDS 927..990
/note="1st part of reading frame (990 is 1st base in
codon)"
/codon_start=927
CDS 1157..1426
/note="2nd part of reading frame (1157 is 2nd base in
codon) (1426 is 1st base in codon)"
/codon_start=1157
CDS 1614..1889
/note="3rd part of reading frame (1614 is 2nd base in
codon) (1889 is 1st base in codon)"
/codon_start=1614
CDS 3950..4234
/note="4th part of reading frame (3950 is 2nd base in
codon) (4234 is 1st base in codon)"
/codon_start=3950
CDS 4360..4476
/note="5th part of reading frame (4360 is 2nd base in
codon) (4476 is 1st base in codon)"
/codon_start=4360
CDS 4640..4672
/note="6th part of reading frame (4640 is 2nd base in
codon) (4672 is 1st base in codon)"
/codon_start=4640
CDS 4843..4881
/note="7th part of reading frame (4843 is 2nd base in
codon) (4881 is 1st base in codon)"
/codon_start=4843
CDS 5021..5022
/note="8th part of reading frame (5021 is 2nd base in
codon)"
/codon_start=5021
BASE COUNT 1260 a 1518 c 1488 g 1443 t
ORIGIN
1 agatctttgt tttaaaaaac aaaaacaaaa caaagattcc gggcgtggtg gcacatgctt
61 taatcccagc acttgggagg cagaggcagg tggactttct gagttcgagg ccagcctgga
121 gtacaaagtg agttccagga cagccagtct ctatacagaa aaaccctatc tctaaaaaaa
181 aaaaaaaaaa aaaaaccaaa gaacgaaaca aacaaacaaa caaacaaaca aaaatccctg
241 cagctacagc tcttcaacta ggaggtaaca caaggaatct gtgagaagac agatcctgag
301 gggagaggcg aaatctacac ttaactgatg agagtcctgc actcaggctt ggcagtgtga
361 gctgcccatt gcaggtgaac agagcctggt ctctgtggag tccatgtggg gctttgcaga
421 ccagcgcctc tgctttaagg agaagcctat cttcactgca tccccaagtg cttgtgtctc
481 cattgtattc ccagaagtgg catttcttct agaagactcc aaggtctaac ttctgaagag
541 aagaaggaag aggaagagtt ggaggatagg gcacagagag tgtggcctgc gggtctctcc
601 tggtgtcctg acagcatctg gatcagaact cggagacacc atgacaaaca gctctctgtc
661 cccggcacag ggttcaggca aagtcttaat ctccaggcag tgaggtcaag ggtagggaag
721 cccatggctg gggattctcc atcttcccca tttcactctg ctcctaacct gggtcagttc
781 attctgccag gacactgatg acgtgtaaca gtctccaccc tattgggtga ggtgattacc
841 cgaaccaatc acggtcggcg cgggagcggg ttgtaaagtc cacgctgccc acaggagtca
901 gtcgaccgga atcccccagg ggagcaatgg ctctaacaat gctgctcttg ctggtggcgg
961 ccgccctgac cctgatcgag acccgcgcgg gtgagtgcgg ggtcgggagg gaaacagccc
1021 ctggtgcgtc ccccgtcgcc caccggaccc ctccgcccct tctccacccg agccccgagc
1081 cctgctccac tcccggcccg cgtacccgac cggggtcccg ggaggaggtc ggggtctcac
1141 cgcgcgccgc ccccaggcca acactcgctg caatatttcc acaccgctgt gtcccggccc
1201 ggcctcgggg agccctggtt catctctgtc ggctacgtgg acgacacgca gttcgtgcgc
1261 ttcgacagcg atgcggaaaa tccgaggatg gagccgcggg cgcggtggat ggagcaggag
1321 gggccggagt attgggagcg ggagacacag atggccaagg gccatgagca gagtttccga
1381 gggagcctga ggactgcaca gagctactac aaccagagca agggcggtga gtgagccccg
1441 ggtcggaggt cacgacccct ccacgtcccg aaacagaggc cggtgaggtc ccgggtccaa
1501 agtccgagtt tcaggagcag aactgaccca ggaccggatt ccctttcagt ttggaggagt
1561 ccgcggtggg ggggaggggg ggggcggagg agggactgac cactgggtcc caggctctca
1621 cacactccaa tggatgtatg gctgtgacat ggggtccgac gggcgcctcc tccgcgggta
1681 cctgcagttc gcctatgaag gccgcgatta catcgccctg aacgaagacc tgaaaacgtg
1741 gacggcggtg gacatggcgg cacagatcac ccgacgcaag tgggagcagg ctggtattgc
1801 agagaaagac caggcctacc tggagggcac gtgcatgcag tcgctccgca gatacctgca
1861 gctcgggaag gagacgctgc tgcgcacagg tgcaggggcc gcgggcagct cctccctctg
1921 ccctcgggtg gggctcagtc ctggggaaga agaaaccctc agctggggtg atgcccctgt
1981 ctcagagggg agagagtgac cctgggtctc ctgatccctc atcacagtga ctgcactgac
2041 tctcccaggg ctcagccttc tccctggaca gtgcccaggc tgtctcagga gggaaggaga
2101 gaatttcccc gaggtaacaa cagctgctcc cttcagttcc cctgcagcat ctgtcagcca
2161 tggcctctcc caggcccggt tgtctgccca cacccactgc tatcctgctg agtgtgtcag
2221 cccttacacc tcatgacctg aagtctcctt taccgatggg agacatggac tatcctacac
2281 taggctgttc ccccagtttc tagaactttc caaagaatac agtctatcag atccctccgt
2341 gtctgtgggg tttgcatcct ttgacaccca attctatcta ttcctgcaat ggtgaatggt
2401 cacatgagcc attatgggtt accctaaaca aatacttttc ttgtgttttt cccctctcgt
2461 tttcttttta tctttacttt ttttaagggt attatgttgc ttataatcgc tttttcttcg
2521 gcactggaat gatgttgctc tctctcccca ccataccccc acccccacct atatcatttg
2581 tatcagtagc cctggctgtc gtggaactca ctctgtagac caggctggcc ttgaactcag
2641 aatcagcctg cctctgcctc tgcctctgcc tctgcctctg cctctgcctc tgcctctgcc
2701 tctgcctctg cctctgcctc tgcctctgcc tctgcctctg cctctgcctc tggattaaag
2761 gctgggccac caccactggg aggagaaagg ttcctgtgag cttaaaatgt tttctgggca
2821 gaattaacca tccagatcac tcctgatatc cctgtgcccc accaagttac agtgctcccc
2881 ctggtgaatc agaacttgga ctctgagaga caggtcttct gcaatccagg cctgagtgag
2941 agggaagacc acacaccctg tgagcccact gtgttccagt gagtgctgca ctgggtccac
3001 agcacactcc agggatcctg tgtgacacat ctgtaccttg tcccccagag tcaggggctg
3061 ggagtcattt tctctggctg agtgtcagag gttcaccaca tttctgctac acactccctg
3121 atggctgttt acttggactg acagttaatg ttggtcagca agatgaccac agtggtttag
3181 tctcaatggt gtcactcttc cagtagcata tggtcctgat ttctaattta gatacgaact
3241 caaacacatg aaatttctta ttttccattc catcttccat tatatagctg cctatctcgt
3301 gctattgaac atcacataag atgaccatgt ttacccactg gctcatgtgg attccctctt
3361 agcttctgag tcccctcagg aaaatgtgca gtcctgtgct gaggggacca gctctgcctg
3421 caggtcacta gtgccatgac agttaaagtg ttcatacaga cacatagttc attgtaatta
3481 ctgatttaac gttgtcttgg cagttttcag tttgcattta tttatttatt tatttattta
3541 tttatttatt tatttaatgc atggaagtac actgttgctg tactgatggt tgtttgcctt
3601 tgtgtggttg ttgggaattg aatttttttt taggacctct ctttgctctg gtcgaccctg
3661 ctcactccgg tcaactccta tgggtcaact ctgctcactc agtccctgct tgttctggcc
3721 caaagattta tttattattt attatacata aatacactgt agctgacttc agatgcacca
3781 gaagagggcg tcagatctca ttacagatgg ttgtgagtca ccatgtggtt gctggggttt
3841 gaactcagga ccttcaaaag agcagtcagt gctcttaccc tctgagccat ctccccagtc
3901 ctcagtttgt cttcttaatt atacgatttc ttgaaatctc tccaaacaga tcccccaaag
3961 gcacatgtga cccatcaccc caggtcttat ggtgctgtca ccctgaggtg ctgggccctg
4021 ggcttctacc ctgctgacat caccctgact tggcagttga atggggagga gctgacccag
4081 gacacggagc ttgtggagac caggcctgca ggggttggaa ccttccagaa gtgggcatct
4141 gtggtggtgc ctcttgggaa ggagcagaat tacacatgcc atgtgaacca tgaggggctg
4201 cctgagcccc ttaccctgag atgggggaga tggggtaagg agggtgtggg tgcagagctg
4261 tggtcaggga aagctggagc attgcggaga gctgctgagc tgctcagggc tcagatctgg
4321 gatgaccctc accttcatta cctgtacctg tcctcccaga gcctcctcca tacactgtct
4381 ccaacatggc gaccattgct gttgtggttg accttggagc tgtggccatc attggagctg
4441 tggtggcttt tgtgatgaat aggaggtgaa acacaggtag gaaagggcag ggtctgagtt
4501 ctctctcagt ctcctttaga agtgtgctct aatcattaat gggaaaccca tctacacccc
4561 acattgctac cttctccaac tgggtcctct gtcagttctg ggaacttcca agatcttcct
4621 tcagctttcc ttctcacagg tggacaagga ggggactgtg ctccagctcc aggttagtgt
4681 ggggacagga ttgtctgtgg acattgcagt gaagctggag atgttgggga gctctgagaa
4741 tccatagtaa ctcttccaga gaaatcttcc agggcctcag ttgtaccaat atgaatacat
4801 atatgtacat atgcatatac attttttacc ttggcaggga cagctcctag agctctgata
4861 gatctctccc agatggtaaa ggtgacactc tggggcctga ttggagaggg gcaatgtgga
4921 tatgattggg tttcagggac tccacgaatc ccctctgagt gagtggtggg ttgttggaat
4981 gttgtcttca cagtgatggg tcttgtccct cattctctag catgaagaca gctgcctgga
5041 ctgcactgag tgacagacga tgtgttcatg tctctcctgt gacatccaga gccctcagtt
5101 ctctttagac aacagtgtct catgttccct gtgagcctat ggactcaatg tgaggaactg
5161 tggagcccag cctgccctgc acacctggac cctgtccctg cactgccctg ttcccttcca
5221 cagccaacct tcctgttcca gccaaccact gggtacatct acatcctgtc agctccatgc
5281 tgccccgagc tccagctcca tactttcaca cgaagagtat gtgaccttga ttgttatcat
5341 cttgagcctg agggttgatt gcttgttaat ttaatggttg agaatactta gcatttttct
5401 cttttttaaa aaaataaata aatggcagat ggagaacttt caggatctgt gtcactgagc
5461 tgtgtgtgtc tgttgggaga gcttgaggct atgagagctg tgtgtgaaca gggctgtgca
5521 caggtggtct cagtcattta ttttctttaa tgggttcact gtgtaacatg cgggctctac
5581 tctctccatc actatgaagc acataccgag agtctgtgat ctcaaggaca cagtgaaggc
5641 ctgagccttg tcctgtcccc aggattatga gctcccaagg gctaaagatc agaactcatc
5701 tggggatcc
//