GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS MUSIAPEC 494 bp ss-mRNA ROD 27-MAY-1991
DEFINITION Mouse Intracisternal A Particle (IAP) RNA U3 region
ACCESSION X16839
KEYWORDS endogenous retrovirus; enhancer; glucocorticoid-responsive element;
intracisternal A-particle; long terminal repeat; promoter.
SOURCE Mus sp. RNA.
ORGANISM Mus sp.
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE 1 (bases 1 to 494)
AUTHORS Morgan,R.A., Christy,R.J. and Huang,R.C.
TITLE Murine A type retroviruses promote high levels of gene expression
in embryonal carcinoma cells
JOURNAL Development 102, 23-30 (1988)
STANDARD full automatic
COMMENT *source: developmental stage=embryonal; *source: tissue=
undifferentiated carcinoma; cell line=PCC3-A/1; *source: library=
lambda gt10; clone=EC26;
From EMBL entry MMIAPEC; dated 19-JAN-1990.
FEATURES Location/Qualifiers
misc_feature 266..475
/note="U3 region"
misc_feature 284..293
/note="pot. Sp1-binding site"
misc_feature 316..321
/note="pot. glucocorticoid-responsive element"
misc_feature 324..331
/note="SV40 core enhancer sequence"
misc_feature 342..351
/note="puridine/pyrimidine stretch"
misc_feature 386..397
/note="Adenovirus type 5 E4 promoter homology"
promoter 414..421
/note="CAAT box"
misc_feature 422..431
/note="Adenovirus E1a core enhancer sequence"
promoter 447..453
/note="pot. TATA box"
misc_feature 476..>494
/note="R region"
misc_feature 476..476
/note="transcriptional start point"
BASE COUNT 111 a 124 c 125 g 134 t
ORIGIN
1 ctgcagctag aaaggctctg cggcatctct gagcctattc tagggagaca tgtcatcttt
61 caagaaggtt gagtgtccaa gtgtccttct ctgcaggcaa aacgacaagg gagcaggtca
121 gggttcctct gggtaaaagc ctgtgagcct aagagcctaa tcctgtacat ggctccttaa
181 cctacacatt ggggatttga cctctatctc cactctcatt aatatgggtg gcctatttgc
241 ctcttattaa aaggaaaggg ggagatgttg ggagccgccc ccacattcgc cgttacaaga
301 tggcgctgac agctgtgttc taagtggtaa acaaataatc tgcgcatgtg ccgagggtgg
361 ttctccactc catgtctctg ccttccccgt gacgtcaact cggccatggc tgcagccaat
421 cagggagtga cacgtcctag gcgaaggata attctcctta atagggacgg gttttcgttt
481 tttctctctc tctt
//