GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS MUSVL30L1 688 bp ss-mRNA ROD 27-MAY-1991
DEFINITION Mouse mRNA for virus-like 30S (VL30) long terminal repeat, NVL-1
ACCESSION X17507
KEYWORDS long terminal repeat; retrotransposon; virus-like retro-element.
SOURCE Mus musculus RNA.
ORGANISM Mus musculus
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE 1 (bases 1 to 688)
AUTHORS Norton,J.D.
JOURNAL Unpublished (1989)
STANDARD full automatic
REFERENCE 2 (bases 1 to 688)
AUTHORS Eaton,L. and Norton,J.D.
TITLE Independent regulation of mouse VL30 retrotransposon expression in
response to serum and oncogenic cell transformation
JOURNAL Nucleic Acids Res. 18, 2069-2077 (1990)
STANDARD full automatic
COMMENT *source: cell line=NIH 3T3.
Data kindly reviewed (02-JUL-1990) by Norton J.D.
From EMBL entry MMVL30L1; dated 25-SEP-1990.
FEATURES Location/Qualifiers
misc_feature 1..353
/note="U3 domain"
misc_feature 1..6
/note="5' inverted repeat"
promoter 322..327
/note="promoter"
misc_feature 353..495
/note="R domain"
misc_feature 353..353
/note="5' cap site"
misc_feature 476..481
/note="polyA signal"
misc_feature 481..621
/note="U5 domain"
misc_feature 578..586
/note="3' inverted repeat 1"
misc_feature 587..604
/note="tRNA primer binding site 1"
misc_feature 613..621
/note="3' inverted repeat 2"
misc_feature 622..639
/note="tRNA primer binding site 2"
BASE COUNT 152 a 169 c 153 g 214 t
ORIGIN
1 tgaagaatga aaaattactg gcctcttgtg agaacatgaa ctttcacctc ggagcccacc
61 ccctcccatc tagaaaacat ttttgagata aaggcctcct ggaacaacct caaaatgaca
121 ttgccaaatg ataagacatg actccttagt tacgtaggtt ccttgatggg acatgactcc
181 ttagttacgt aggttccttg ataggacatg actccttagt tacgtagaat cctttggcag
241 aaccccttgt cccttggcag aactccctag tgatgtaaac ttgtactttc cctgcccagt
301 tctcccccct ttgagtttta ctatataagc ctgtgaaaaa ttttggctgg tcgtcgagac
361 tcctctaccc tgtgcaaagg tgtatgagtt tcgaccccag agctctgtgt gctttctgtt
421 gctgctttat ttcgacccca gagctctggt ctgtgtgctt tcatgtcgct gctttattaa
481 atcttacctt ctacatttta tgtatggtct cagtgtcttc ttgggtacgc ggctgtcccg
541 ggacttgagt gtctgagtga gggtcttccc tcgagggtct ttcatttggt acatgggccg
601 ggaattcgag aatctttcat ttggtgcatt ggccgggaat tcacagcgcg accacccaga
661 ggtcctagac cacttagagg taagattc
//GenBank-Updates@genbank.bio.net (05/27/91)
LOCUS MUSVL30L2 720 bp ss-mRNA ROD 27-MAY-1991
DEFINITION Mouse mRNA for virus-like 30S (VL30) long terminal repeat, NVL-2
ACCESSION X17508
KEYWORDS long terminal repeat; retrotransposon; virus-like retro-element.
SOURCE Mus musculus RNA.
ORGANISM Mus musculus
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE 1 (bases 1 to 720)
AUTHORS Norton,J.D.
JOURNAL Unpublished (1989)
STANDARD full automatic
REFERENCE 2 (bases 1 to 720)
AUTHORS Eaton,L. and Norton,J.D.
TITLE Independent regulation of mouse VL30 retrotransposon expression in
response to serum and oncogenic cell transformation
JOURNAL Nucleic Acids Res. 18, 2069-2077 (1990)
STANDARD full automatic
COMMENT *source: cell line=NIH 3T3.
Data kindly reviewed (02-JUL-1990) by Norton J.D.
From EMBL entry MMVL30L2; dated 25-SEP-1990.
FEATURES Location/Qualifiers
misc_feature 1..353
/note="U3 domain"
misc_feature 1..6
/note="5' inverted repeat"
promoter 322..327
/note="promoter"
misc_feature 353..495
/note="R domain"
misc_feature 353..353
/note="5' cap site"
misc_feature 476..481
/note="polyA signal"
misc_feature 481..656
/note="U5 domain"
misc_feature 578..586
/note="3' inverted repeat 1"
misc_feature 587..604
/note="tRNA primer binding site 1"
misc_feature 613..621
/note="3' inverted repeat 2"
misc_feature 622..639
/note="tRNA primer binding site 2"
misc_feature 648..656
/note="3' inverted repeat 3"
misc_feature 657..674
/note="tRNA primer binding site 3"
BASE COUNT 159 a 174 c 163 g 224 t
ORIGIN
1 tgaagaatga aaaattactg gcctcttgtg agaacatgaa ctttcacctc ggagcccacc
61 ccctcccatc tagaaaacat ttttgagata aaggcctcct ggaacaacct caaaatgaca
121 ttgccaaatg ataagacatg actccttagt tacgtaggtt ccttgatggg acatgactcc
181 ttagttacgt aggttccttg ataggacatg actccttagt tacgtagaat cctttggcag
241 aaccccttgt cccttggcag aactccctag tgatgtaaac ttgtactttc cctgcccagt
301 tctcccccct ttgagtttta ctatataagc ctgtgaaaaa ttttggctgg tcgtcgagac
361 tcctctaccc tgtgcaaagg tgtatgagtt tcgaccccag agctctgtgt gctttctgtt
421 gctgctttat ttcgacccca gagctctggt ctgtgtgctt tcatgtcgct gctttattaa
481 atcttacctt ctacatttta tgtatggtct cagtgtcttc ttgggtacgc ggctgtcccg
541 ggacttgagt gtctgagtga gggtcttccc tcgagggtct ttcatttggt acatgggccg
601 ggaattcgag aatctttcat ttggtgcatt ggccgggaat tcgaaaatct ttcatttggt
661 gcgttggccg ggaaacagcg cgaccaccca gaggtcctag accacttaga ggtaagattc
//