GenBank-Updates@genbank.bio.net (05/22/91)
LOCUS FIPFIPVMN 2000 bp ss-mRNA VRL 22-MAY-1991 DEFINITION Feline infectious peritonitis virus (FIPV) genes for membrane and nucleocapsid proteins ACCESSION X56496 KEYWORDS M-protein; N-protein; membrane protein; nucleocapsid protein. SOURCE Feline infectious peritonitis virus RNA. ORGANISM Feline infectious peritonitis virus Viridae; ss-RNA enveloped viruses; Positive strand RNA virus; Coronaviridae. REFERENCE 1 (bases 1 to 2000) AUTHORS Vennema,H. JOURNAL Unpublished (1990) STANDARD full automatic REFERENCE 2 (sites) AUTHORS Vennema,H., De,G.R.J., Harbour,D.A., Horzinek,M.C. and Spaan,W.J. TITLE Primary structure of the membrane & nucleocapsid genes of Feline Infectious Peritonitis Virus & immunogenicity of recombinant vaccinia viruses in kittens. JOURNAL Virology 181, 327-335 (1991) STANDARD full staff_review COMMENT See M23694 From EMBL 26 entry COFIPVMN; dated 25-MAR-1991. FEATURES Location/Qualifiers repeat_unit 41..48 CDS 52..840 /product="membrane protein" /evidence=EXPERIMENTAL /codon_start=52 repeat_unit 839..846 CDS 853..1986 /product="nucleocapsid protein" /evidence=EXPERIMENTAL /codon_start=853 repeat_unit 1981..1988 BASE COUNT 609 a 384 c 438 g 569 t ORIGIN 1 aaaccaaggc atataatccc gacgaagcat ttttggtttg aactaaacaa aatgaagtac 61 attttgctaa tactcgcgtg cataattgca tgcgtttatg gtgaacgcta ctgtgccatg 121 caagacagtg gcttgcagtg tattaatggc acaaattcaa gatgtcaaac ctgctttgaa 181 cgtggtgatc ttatttggca tcttgctaac tggaacttca gctggtctgt aatattgatt 241 gtttttataa cagtgttaca atatggcaga ccacaattta gctggctcgt ttatggcatt 301 aaaatgctga tcatgtggct attatggcct attgttctag cgcttacgat ttttaatgca 361 tactctgagt accaagtttc cagatatgta atgttcggct ttagtgttgc aggtgcagtt 421 gtaacgtttg cactttggat gatgtatttt gtgagatctg ttcagctata tagaagaacc 481 aaatcatggt ggtcttttaa tcctgagact aatgcaattc tttgtgttaa tgcattgggt 541 agaagttatg tgcttccctt agatggtact cctacaggtg ttacccttac tctactttca 601 ggaaatctat atgctgaagg tttcaaaatg gctggtggtt taaccatcga gcatttgcct 661 aaatacgtca tgattgctac acctagtaga accatcgttt atacattagt tggaaaacaa 721 ttaaaagcaa ctactgccac aggatgggct tactacgtaa aatctaaagc tggtgattac 781 tcaacagaag cacgtactga caatttgagt gaacatgaaa aattattaca tatggtgtaa 841 ctaaactttc aaatggccac acagggacaa cgcgtcaact ggggagatga accttccaaa 901 agacgtggtc gttctaactc tcgtggtcgg aagaataatg atataccttt gtcattctac 961 aaccccatta ccctcgaaca aggatctaaa ttttggaatt tatgtccgag agaccttgtt 1021 cccaaaggaa taggtaataa ggatcaacaa attggttatt ggaatagaca gattcgttat 1081 cgtattgtaa aaggccagcg taaggaactc gctgagaggt ggttctttta cttcttaggt 1141 acaggacctc atgctgatgc taaattcaaa gacaagattg atggagtctt ctgggttgca 1201 agggatggtg ccatgaacaa gcccacaacg cttggcactc gtggaaccaa taacgaatcc 1261 aaaccactga gatttgatgg taagataccg ccacagtttc agcttgaagt gaaccgttct 1321 aggaacaatt caaggtctgg ttctcagtct agatctgttt caagaaacag atctcaatct 1381 agaggaagac accattccaa taaccagaat aataatgttg aggatacaat tgtagccgtg 1441 cttgaaaaat taggtgttac tgacaaacaa aggtcacgtt ctaaacctag agaacgtagt 1501 gattccaaac ctagggacac aacacctaag aatgccaaca aacacacctg gaagaaaact 1561 gcaggcaagg gagatgtgac aactttctat ggtgctagaa gtagttcagc taactttggt 1621 gatagtgatc tcgttgccaa tggtaacgct gccaaatgct accctcagat agctgaatgt 1681 gttccatcag tgtctagcat aatctttggc agtcaatggt ctgctgaaga agctggtgat 1741 caagtgaaag tcacgctcac tcacacctac tacctgccaa aggatgatgc caaaactagt 1801 caattcctag aacagattga cgcttacaag cgaccttctg aagtggctaa ggatcagagg 1861 caaagaagat cccgttctaa gtctgctgat aagaagcctg aggagttgtc tgtaactctt 1921 gtggaggcat acacagatgt gtttgatgac acacaggttg agatgattga tgaggttacg 1981 aactaaacgc atgctcgttt //
GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS FIPFIPVE2 4500 bp ss-mRNA VRL 28-MAY-1991 DEFINITION Feline infectious peritonitis virus (FIPV) gene for E2 peplomer glycoprotein ACCESSION X06170 KEYWORDS E2 glycoprotein; glycoprotein; peplomer protein; transmembrane protein. SOURCE Feline infectious peritonitis virus RNA. ORGANISM Feline infectious peritonitis virus Viridae; ss-RNA enveloped viruses; Positive strand RNA virus; Coronaviridae. REFERENCE 1 (bases 1 to 4500) AUTHORS Horzinek,M.C., De,G.R.J., Maduro,J., Lenstra,J.A., Van,d.Z.B.A. and Spaan,W.J. TITLE DNA Cloning and Sequence Analysis of the Gene Encoding the Peplomer Protein of Feline Infectious Peritonitis Virus JOURNAL J. Gen. Virol. 68, 2639-2646 (1987) STANDARD full automatic COMMENT SWISS-PROT; P10033; VGL2$FIPV. *source: strain=79-1146; cell line=Fewf-cells; library=pUC9; From EMBL entry COFIPVE2; dated 14-NOV-1988. FEATURES Location/Qualifiers repeat_region 37..45 /note="direct repeat 1" CDS 70..4425 /note="E2 glycopreprotein (AA -19 to 1443)" /codon_start=70 CDS 70..126 /note="put. signal peptide (AA -19 to -1)" /codon_start=70 CDS 71..4425 /note="put. E2 glycoprotein (AA 1 - 1443)" /codon_start=71 misc_feature 4249..4311 /note="transmembrane domain" repeat_region 4465..4473 /note="direct repeat 1" BASE COUNT 1357 a 763 c 900 g 1480 t ORIGIN 1 gaagggtaag ttactcatta gaaataatgg caagctacta aactttggta atcatttagt 61 taatgtgcca tgattgtgct cgtaacttgc ctcttgttgt tatgttcata ccacacagtt 121 ttgagtacaa caaataatga atgcatacaa gttaacgtaa cacaattggc tggcaatgaa 181 aaccttatca gagattttct gtttagtaac tttaaagaag aaggaagtgt agttgttggt 241 ggttattacc ctacagaggt gtggtacaac tgctctagaa cagctcgaac tactgccttt 301 cagtatttta ataatataca tgccttttat tttgttatgg aagccatgga aaatagcact 361 ggtaatgcac gtggtaaacc attattattt catgtgcatg gtgagcctgt tagtgttatt 421 atatcggctt atagggatga tgtgcaacaa aggccccttt taaaacatgg gttagtgtgc 481 ataactaaaa atcgccatat taactatgaa caattcacct ccaaccagtg gaattccaca 541 tgtacgggtg ctgacagaaa aattcctttc tctgtcatac ccacggacaa tggaacaaaa 601 atctatggtc ttgagtggaa tgatgacttt gttacagctt atattagtgg tcgttcttat 661 cacttgaaca tcaatactaa ttggtttaac aatgtcacac ttttgtattc acgctcaagc 721 actgctacct gggaatacag tgctgcatat gcttaccaag gtgtttctaa cttcacttat 781 tacaagttaa ataacaccaa tggtctaaaa acctatgaat tatgtgaaga ttatgaacat 841 tgcactggct atgctaccaa tgtatttgct ccgacatcag gtggttacat acctgatgga 901 tttagtttta acaattggtt cttgcttaca aatagttcca cttttgttag tggcaggttt 961 gtaacaaatc aaccattatt gattaattgc ttgtggccag tgcccagttt tggtgtagca 1021 gcacaagaat tttgttttga aggtgcacag tttagccaat gtaatggtgt gtctttaaat 1081 aacacagtgg atgttattag attcaacctt aatttcactg cagatgtaca atctggtatg 1141 ggtgctacag tattttcact gaatacaaca ggtggtgtca ttcttgaaat ttcatgttat 1201 agtgacacag tgagtgagtc tagttcttac agttatggtg aaatcccgtt cggcataact 1261 gacggaccac gatactgtta tgtactttac aatggcacag ctcttaaata tttaggaaca 1321 ttaccaccca gtgtaaagga aattgctatt agtaagtggg gccattttta tattaatggt 1381 tacaatttct ttagcacatt tcctattggt tgtatatctt ttaatttaac cactggtgtt 1441 agtggagctt tttggacaat tgcttacaca tcgtatactg aagcattagt acaagttgaa 1501 aacacagcta ttaaaaatgt gacgtattgt aacagtcaca ttaataacat taaatgttct 1561 caacttactg ctaatttgaa taatggattt tatcctgttg cttcaagtga agtaggtttc 1621 gttaataaga gtgttgtgtt attacctagc tttttcacat acaccgctgt caatataacc 1681 attgatcttg gtatgaagct tagtggttat ggtcaaccca tagcctcgac actaagtaac 1741 atcacactac caatgcagga taacaatact gatgtgtact gtattcgttc taaccaattc 1801 tcagtttatg ttcattccac ttgcaaaagt tctttatggg acaatatttt taatcaagac 1861 tgcacggatg ttttagaggc tacagctgtt ataaaaactg gtacttgtcc tttctcattt 1921 gataaattga acaattactt gacttttaac aagttctgtt tgtcgttgag tcctgttggt 1981 gctaattgca agtttgatgt tgctgcacgt acaagaacca atgagcaggt tgttagaagt 2041 ctatatgtaa tatatgaaga aggagacaac atagtgggtg taccgtctga taatagcggt 2101 ctgcacgatt tgtctgtgct acacctagac tcctgtacag attacaatat atatggtaga 2161 actggtgttg gtattattag acgaactaac agtacgctac ttagtggctt atattacaca 2221 tcactatcag gtgatttgtt aggctttaaa aatgttagtg atggtgtcat ttattctgtg 2281 acgccatgtg atgtaagcgc acaagcggct gttattgatg gtgccatagt tggagctatg 2341 acttccatta acagtgaact gttaggtcta acacattgga caacgacacc taatttttat 2401 tactactcta tatataatta cacaagtgag aggactcgtg gcactgcaat tgacagtaac 2461 gatgttgatt gtgaacctgt cataacctat tctaatatag gtgtttgtaa aaatggtgct 2521 ttggttttta ttaacgtcac acattctgac ggagacgtgc aaccaattag cactggtaat 2581 gtcacgatac ctacaaattt tactatatct gtgcaagttg aatacatgca ggtttacact 2641 acaccagtat caatagattg tgcaagatac gtttgtaatg gtaaccctag atgtaacaaa 2701 ttgttaacac aatatgtgtc tgcatgtcaa actattgaac aagcacttgc aatgggtgcc 2761 agacttgaaa acatggaggt tgattccatg ttgtttgtct cggaaaatgc ccttaaattg 2821 gcatctgttg aggcgttcaa tagtacagaa aatttagatc ctatttacaa agaatggcct 2881 agcataggtg gttcttggct aggaggtcta aaagatatac taccgtccca taatagcaaa 2941 cgtaagtatg gttctgctat agaagatttg ctttttgata aagttgtaac atctggttta 3001 ggtacagttg atgaagatta taaacgttgt actggtggtt acgacatagc agacttggtg 3061 tgtgctcaat attacaatgg catcatggtt ctaccaggtg tagctaatgc tgacaagatg 3121 actatgtaca cagcatcact tgcaggtggt ataacattag gtgcacttgg tggtggcgcc 3181 gtggctatac cttttgcagt agcagtacag gctagactta attatgttgc tctacaaact 3241 gatgtattga ataaaaacca acagatcctg gctaatgctt tcaatcaagc tattggtaac 3301 attacacagg cttttggtaa ggttaatgat gctatacatc aaacatcaca aggtcttgcc 3361 actgttgcta aagcgttggc aaaagtgcaa gatgttgtca acacacaagg gcaagcttta 3421 agtcacctta cagtacaatt gcaaaataat tttcaagcca ttagtagttc tattagtgat 3481 atttataaca ggcttgacga actgagtgct gatgcacaag ttgataggct gattacaggt 3541 agacttacag cacttaatgc atttgtgtct cagactctaa ccagacaagc agaggttagg 3601 gctagtagac aacttgccaa agacaaggtt aatgaatgtg ttaggtctca gtctcagaga 3661 ttcggattct gtggtaatgg tacacatttg ttttcactag caaatgcagc accaaatggc 3721 atgattttct ttcatacagt actattacca acagcttatg aaactgtaac agcttggtca 3781 ggtatttgtg cttcagatgg cgatcgcact ttcggacttg tcgttaaaga tgtgcagttg 3841 acgttgtttc gtaatctaga tgacaagttc tatttgaccc ccagaactat gtatcagcct 3901 agagttgcaa ctagttctga ttttgttcaa attgaagggt gtgatgtgtt gtttgtcaac 3961 gcgactgtaa ttgatttgcc tagtattata cctgactata ttgacattaa tcaaactgtt 4021 caagacatat tagaaaatta cagaccaaac tggactgtac ctgaatttac acttgatatt 4081 ttcaacgcaa cctatttaaa tctgactggt gaaattgatg acttagagtt taggtcagaa 4141 aagctacata acactacagt agaacttgcc attctcattg ataacattaa taatacatta 4201 gtcaatcttg aatggctcaa tagaattgaa acttatgtaa aatggccttg gtatgtgtgg 4261 ctactgatag gtttagtagt agtattttgc ataccattac tgctattttg ctgttttagc 4321 acaggttgtt gtggatgcat aggttgttta ggaagttgtt gtcactctat atgtagtaga 4381 agacaatttg aaaattatga accaattgaa aaagtgcatg tccactaaat ttaaagttaa 4441 ggatgttgaa taaattcctt aagaactaaa cttattagtc attacaggtc ttgtatggac //