GenBank-Updates@genbank.bio.net (05/22/91)
LOCUS FIPFIPVMN 2000 bp ss-mRNA VRL 22-MAY-1991
DEFINITION Feline infectious peritonitis virus (FIPV) genes for membrane and
nucleocapsid proteins
ACCESSION X56496
KEYWORDS M-protein; N-protein; membrane protein; nucleocapsid protein.
SOURCE Feline infectious peritonitis virus RNA.
ORGANISM Feline infectious peritonitis virus
Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
Coronaviridae.
REFERENCE 1 (bases 1 to 2000)
AUTHORS Vennema,H.
JOURNAL Unpublished (1990)
STANDARD full automatic
REFERENCE 2 (sites)
AUTHORS Vennema,H., De,G.R.J., Harbour,D.A., Horzinek,M.C. and Spaan,W.J.
TITLE Primary structure of the membrane & nucleocapsid genes of Feline
Infectious Peritonitis Virus & immunogenicity of recombinant
vaccinia viruses in kittens.
JOURNAL Virology 181, 327-335 (1991)
STANDARD full staff_review
COMMENT See M23694
From EMBL 26 entry COFIPVMN; dated 25-MAR-1991.
FEATURES Location/Qualifiers
repeat_unit 41..48
CDS 52..840
/product="membrane protein"
/evidence=EXPERIMENTAL
/codon_start=52
repeat_unit 839..846
CDS 853..1986
/product="nucleocapsid protein"
/evidence=EXPERIMENTAL
/codon_start=853
repeat_unit 1981..1988
BASE COUNT 609 a 384 c 438 g 569 t
ORIGIN
1 aaaccaaggc atataatccc gacgaagcat ttttggtttg aactaaacaa aatgaagtac
61 attttgctaa tactcgcgtg cataattgca tgcgtttatg gtgaacgcta ctgtgccatg
121 caagacagtg gcttgcagtg tattaatggc acaaattcaa gatgtcaaac ctgctttgaa
181 cgtggtgatc ttatttggca tcttgctaac tggaacttca gctggtctgt aatattgatt
241 gtttttataa cagtgttaca atatggcaga ccacaattta gctggctcgt ttatggcatt
301 aaaatgctga tcatgtggct attatggcct attgttctag cgcttacgat ttttaatgca
361 tactctgagt accaagtttc cagatatgta atgttcggct ttagtgttgc aggtgcagtt
421 gtaacgtttg cactttggat gatgtatttt gtgagatctg ttcagctata tagaagaacc
481 aaatcatggt ggtcttttaa tcctgagact aatgcaattc tttgtgttaa tgcattgggt
541 agaagttatg tgcttccctt agatggtact cctacaggtg ttacccttac tctactttca
601 ggaaatctat atgctgaagg tttcaaaatg gctggtggtt taaccatcga gcatttgcct
661 aaatacgtca tgattgctac acctagtaga accatcgttt atacattagt tggaaaacaa
721 ttaaaagcaa ctactgccac aggatgggct tactacgtaa aatctaaagc tggtgattac
781 tcaacagaag cacgtactga caatttgagt gaacatgaaa aattattaca tatggtgtaa
841 ctaaactttc aaatggccac acagggacaa cgcgtcaact ggggagatga accttccaaa
901 agacgtggtc gttctaactc tcgtggtcgg aagaataatg atataccttt gtcattctac
961 aaccccatta ccctcgaaca aggatctaaa ttttggaatt tatgtccgag agaccttgtt
1021 cccaaaggaa taggtaataa ggatcaacaa attggttatt ggaatagaca gattcgttat
1081 cgtattgtaa aaggccagcg taaggaactc gctgagaggt ggttctttta cttcttaggt
1141 acaggacctc atgctgatgc taaattcaaa gacaagattg atggagtctt ctgggttgca
1201 agggatggtg ccatgaacaa gcccacaacg cttggcactc gtggaaccaa taacgaatcc
1261 aaaccactga gatttgatgg taagataccg ccacagtttc agcttgaagt gaaccgttct
1321 aggaacaatt caaggtctgg ttctcagtct agatctgttt caagaaacag atctcaatct
1381 agaggaagac accattccaa taaccagaat aataatgttg aggatacaat tgtagccgtg
1441 cttgaaaaat taggtgttac tgacaaacaa aggtcacgtt ctaaacctag agaacgtagt
1501 gattccaaac ctagggacac aacacctaag aatgccaaca aacacacctg gaagaaaact
1561 gcaggcaagg gagatgtgac aactttctat ggtgctagaa gtagttcagc taactttggt
1621 gatagtgatc tcgttgccaa tggtaacgct gccaaatgct accctcagat agctgaatgt
1681 gttccatcag tgtctagcat aatctttggc agtcaatggt ctgctgaaga agctggtgat
1741 caagtgaaag tcacgctcac tcacacctac tacctgccaa aggatgatgc caaaactagt
1801 caattcctag aacagattga cgcttacaag cgaccttctg aagtggctaa ggatcagagg
1861 caaagaagat cccgttctaa gtctgctgat aagaagcctg aggagttgtc tgtaactctt
1921 gtggaggcat acacagatgt gtttgatgac acacaggttg agatgattga tgaggttacg
1981 aactaaacgc atgctcgttt
//GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS FIPFIPVE2 4500 bp ss-mRNA VRL 28-MAY-1991
DEFINITION Feline infectious peritonitis virus (FIPV) gene for E2 peplomer
glycoprotein
ACCESSION X06170
KEYWORDS E2 glycoprotein; glycoprotein; peplomer protein;
transmembrane protein.
SOURCE Feline infectious peritonitis virus RNA.
ORGANISM Feline infectious peritonitis virus
Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
Coronaviridae.
REFERENCE 1 (bases 1 to 4500)
AUTHORS Horzinek,M.C., De,G.R.J., Maduro,J., Lenstra,J.A., Van,d.Z.B.A. and
Spaan,W.J.
TITLE DNA Cloning and Sequence Analysis of the Gene Encoding the Peplomer
Protein of Feline Infectious Peritonitis Virus
JOURNAL J. Gen. Virol. 68, 2639-2646 (1987)
STANDARD full automatic
COMMENT SWISS-PROT; P10033; VGL2$FIPV.
*source: strain=79-1146; cell line=Fewf-cells; library=pUC9;
From EMBL entry COFIPVE2; dated 14-NOV-1988.
FEATURES Location/Qualifiers
repeat_region 37..45
/note="direct repeat 1"
CDS 70..4425
/note="E2 glycopreprotein (AA -19 to 1443)"
/codon_start=70
CDS 70..126
/note="put. signal peptide (AA -19 to -1)"
/codon_start=70
CDS 71..4425
/note="put. E2 glycoprotein (AA 1 - 1443)"
/codon_start=71
misc_feature 4249..4311
/note="transmembrane domain"
repeat_region 4465..4473
/note="direct repeat 1"
BASE COUNT 1357 a 763 c 900 g 1480 t
ORIGIN
1 gaagggtaag ttactcatta gaaataatgg caagctacta aactttggta atcatttagt
61 taatgtgcca tgattgtgct cgtaacttgc ctcttgttgt tatgttcata ccacacagtt
121 ttgagtacaa caaataatga atgcatacaa gttaacgtaa cacaattggc tggcaatgaa
181 aaccttatca gagattttct gtttagtaac tttaaagaag aaggaagtgt agttgttggt
241 ggttattacc ctacagaggt gtggtacaac tgctctagaa cagctcgaac tactgccttt
301 cagtatttta ataatataca tgccttttat tttgttatgg aagccatgga aaatagcact
361 ggtaatgcac gtggtaaacc attattattt catgtgcatg gtgagcctgt tagtgttatt
421 atatcggctt atagggatga tgtgcaacaa aggccccttt taaaacatgg gttagtgtgc
481 ataactaaaa atcgccatat taactatgaa caattcacct ccaaccagtg gaattccaca
541 tgtacgggtg ctgacagaaa aattcctttc tctgtcatac ccacggacaa tggaacaaaa
601 atctatggtc ttgagtggaa tgatgacttt gttacagctt atattagtgg tcgttcttat
661 cacttgaaca tcaatactaa ttggtttaac aatgtcacac ttttgtattc acgctcaagc
721 actgctacct gggaatacag tgctgcatat gcttaccaag gtgtttctaa cttcacttat
781 tacaagttaa ataacaccaa tggtctaaaa acctatgaat tatgtgaaga ttatgaacat
841 tgcactggct atgctaccaa tgtatttgct ccgacatcag gtggttacat acctgatgga
901 tttagtttta acaattggtt cttgcttaca aatagttcca cttttgttag tggcaggttt
961 gtaacaaatc aaccattatt gattaattgc ttgtggccag tgcccagttt tggtgtagca
1021 gcacaagaat tttgttttga aggtgcacag tttagccaat gtaatggtgt gtctttaaat
1081 aacacagtgg atgttattag attcaacctt aatttcactg cagatgtaca atctggtatg
1141 ggtgctacag tattttcact gaatacaaca ggtggtgtca ttcttgaaat ttcatgttat
1201 agtgacacag tgagtgagtc tagttcttac agttatggtg aaatcccgtt cggcataact
1261 gacggaccac gatactgtta tgtactttac aatggcacag ctcttaaata tttaggaaca
1321 ttaccaccca gtgtaaagga aattgctatt agtaagtggg gccattttta tattaatggt
1381 tacaatttct ttagcacatt tcctattggt tgtatatctt ttaatttaac cactggtgtt
1441 agtggagctt tttggacaat tgcttacaca tcgtatactg aagcattagt acaagttgaa
1501 aacacagcta ttaaaaatgt gacgtattgt aacagtcaca ttaataacat taaatgttct
1561 caacttactg ctaatttgaa taatggattt tatcctgttg cttcaagtga agtaggtttc
1621 gttaataaga gtgttgtgtt attacctagc tttttcacat acaccgctgt caatataacc
1681 attgatcttg gtatgaagct tagtggttat ggtcaaccca tagcctcgac actaagtaac
1741 atcacactac caatgcagga taacaatact gatgtgtact gtattcgttc taaccaattc
1801 tcagtttatg ttcattccac ttgcaaaagt tctttatggg acaatatttt taatcaagac
1861 tgcacggatg ttttagaggc tacagctgtt ataaaaactg gtacttgtcc tttctcattt
1921 gataaattga acaattactt gacttttaac aagttctgtt tgtcgttgag tcctgttggt
1981 gctaattgca agtttgatgt tgctgcacgt acaagaacca atgagcaggt tgttagaagt
2041 ctatatgtaa tatatgaaga aggagacaac atagtgggtg taccgtctga taatagcggt
2101 ctgcacgatt tgtctgtgct acacctagac tcctgtacag attacaatat atatggtaga
2161 actggtgttg gtattattag acgaactaac agtacgctac ttagtggctt atattacaca
2221 tcactatcag gtgatttgtt aggctttaaa aatgttagtg atggtgtcat ttattctgtg
2281 acgccatgtg atgtaagcgc acaagcggct gttattgatg gtgccatagt tggagctatg
2341 acttccatta acagtgaact gttaggtcta acacattgga caacgacacc taatttttat
2401 tactactcta tatataatta cacaagtgag aggactcgtg gcactgcaat tgacagtaac
2461 gatgttgatt gtgaacctgt cataacctat tctaatatag gtgtttgtaa aaatggtgct
2521 ttggttttta ttaacgtcac acattctgac ggagacgtgc aaccaattag cactggtaat
2581 gtcacgatac ctacaaattt tactatatct gtgcaagttg aatacatgca ggtttacact
2641 acaccagtat caatagattg tgcaagatac gtttgtaatg gtaaccctag atgtaacaaa
2701 ttgttaacac aatatgtgtc tgcatgtcaa actattgaac aagcacttgc aatgggtgcc
2761 agacttgaaa acatggaggt tgattccatg ttgtttgtct cggaaaatgc ccttaaattg
2821 gcatctgttg aggcgttcaa tagtacagaa aatttagatc ctatttacaa agaatggcct
2881 agcataggtg gttcttggct aggaggtcta aaagatatac taccgtccca taatagcaaa
2941 cgtaagtatg gttctgctat agaagatttg ctttttgata aagttgtaac atctggttta
3001 ggtacagttg atgaagatta taaacgttgt actggtggtt acgacatagc agacttggtg
3061 tgtgctcaat attacaatgg catcatggtt ctaccaggtg tagctaatgc tgacaagatg
3121 actatgtaca cagcatcact tgcaggtggt ataacattag gtgcacttgg tggtggcgcc
3181 gtggctatac cttttgcagt agcagtacag gctagactta attatgttgc tctacaaact
3241 gatgtattga ataaaaacca acagatcctg gctaatgctt tcaatcaagc tattggtaac
3301 attacacagg cttttggtaa ggttaatgat gctatacatc aaacatcaca aggtcttgcc
3361 actgttgcta aagcgttggc aaaagtgcaa gatgttgtca acacacaagg gcaagcttta
3421 agtcacctta cagtacaatt gcaaaataat tttcaagcca ttagtagttc tattagtgat
3481 atttataaca ggcttgacga actgagtgct gatgcacaag ttgataggct gattacaggt
3541 agacttacag cacttaatgc atttgtgtct cagactctaa ccagacaagc agaggttagg
3601 gctagtagac aacttgccaa agacaaggtt aatgaatgtg ttaggtctca gtctcagaga
3661 ttcggattct gtggtaatgg tacacatttg ttttcactag caaatgcagc accaaatggc
3721 atgattttct ttcatacagt actattacca acagcttatg aaactgtaac agcttggtca
3781 ggtatttgtg cttcagatgg cgatcgcact ttcggacttg tcgttaaaga tgtgcagttg
3841 acgttgtttc gtaatctaga tgacaagttc tatttgaccc ccagaactat gtatcagcct
3901 agagttgcaa ctagttctga ttttgttcaa attgaagggt gtgatgtgtt gtttgtcaac
3961 gcgactgtaa ttgatttgcc tagtattata cctgactata ttgacattaa tcaaactgtt
4021 caagacatat tagaaaatta cagaccaaac tggactgtac ctgaatttac acttgatatt
4081 ttcaacgcaa cctatttaaa tctgactggt gaaattgatg acttagagtt taggtcagaa
4141 aagctacata acactacagt agaacttgcc attctcattg ataacattaa taatacatta
4201 gtcaatcttg aatggctcaa tagaattgaa acttatgtaa aatggccttg gtatgtgtgg
4261 ctactgatag gtttagtagt agtattttgc ataccattac tgctattttg ctgttttagc
4321 acaggttgtt gtggatgcat aggttgttta ggaagttgtt gtcactctat atgtagtaga
4381 agacaatttg aaaattatga accaattgaa aaagtgcatg tccactaaat ttaaagttaa
4441 ggatgttgaa taaattcctt aagaactaaa cttattagtc attacaggtc ttgtatggac
//