GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS IBAIBVS1 1776 bp ss-mRNA VRL 28-MAY-1991
DEFINITION Avian infectious bronchitis virus partial S gene for spike
glycoprotein S1 subunit
ACCESSION X52084
KEYWORDS S gene; glycoprotein; spike glycoprotein;
spike glycoprotein S1 subunit.
SOURCE Avian infectious bronchitis virus RNA.
ORGANISM Avian infectious bronchitis virus
Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
Coronaviridae.
REFERENCE 1 (bases 1 to 1776)
AUTHORS Koch,G.
JOURNAL Unpublished (1990)
STANDARD full automatic
REFERENCE 2 (sites)
AUTHORS Koch,G. and Kant,A.
TITLE Nucleotide and amino acid sequence of the S1 subunit of the spike
glycoprotein of avian infectious bronchitis virus, strain D3896
JOURNAL Nucleic Acids Res. 18, 3063-3064 (1990)
STANDARD full staff_review
COMMENT SWISS-PROT; P17662; VGL2$IBVD3.
*source: strain=D3896;
From EMBL entry COIBVS1; dated 06-JUL-1990.
FEATURES Location/Qualifiers
CDS 127..>1776
/note="spike glycoprotein S1 subunit (AA 1-550)"
/codon_start=127
misc_feature 1726..1740
/note="S1/S2 protein cleavage signal"
BASE COUNT 505 a 283 c 353 g 634 t 1 others
ORIGIN
1 atagtatatt tgacgttgct aagtttgatt tgaaattaaa agcaacgcca gttgtaaatt
61 tgaaaactga acacaagacc gacttagtag ttaatttact aaggaacggt aaattattgg
121 ttagagatgt tggagaagtc actgttatta gtgactcttt tgtttgcact atgtagtgct
181 aatctgtttg gtaataattc ttacgtgtac tactaccaaa gtgccttcag accacctaat
241 ggttggcatt tacatggtgg tgcttatgaa gtagtaaatg tttctacgga atctagtaat
301 gcaggcacga ctgagtgtac tgccggtgct atttattgga gtaagaattt cagtgctgct
361 tccgtggcta tgacagcacc tcaaaatggt atgttatggt ctactgcgca attttgtacg
421 gctcactgca attttactga ttttgtagta tttgttacac attgctataa aagtgcttct
481 ggttcatgtc ctttaacagg tctgattcca cagtatcata ttcgtatttc tgctatgaaa
541 aatagcagtt tgttttataa cttaacagtt gctgtgacta aatatcctag atttaagtcg
601 cttcagtgtg ttaataatat gacatctgta tacctaaatg gcgatctcgt ttttacttct
661 aacgagacta aagatgttag tgctgcaggt gttcatttta aagctggtgg ccctataact
721 tataaagtta tgcgggaagt taaagcattg gcttattttg ttaatggcac cgcacaagat
781 gtgattcttt gtgacggttc acctacaggt ttactagcat gtcagtataa tactggtaat
841 ttttcagatg gcttttatcc ttttactaat agtagtttag ttaaggaaaa gtttattgtt
901 tatcgtgaaa gtagtgttaa cactactttg gagttaacta atttcacttt ttctaatgta
961 agtaatgcta accctaacac agggggtgtc cataccatac aattatatca aaccagcaca
1021 gctcagagtg gtcattataa ttttaatttc tcctttctga gtagttttac ctataaggag
1081 tctgattata tgtatgggtc ttaccaccca agttgtaagt ttagactaga aactattaat
1141 aatggtttgt ggtttaactc actttccgtc tctcttggtt acggacctat tcaaggtggt
1201 tgtaagcaat ctgtgttcca aaatagggca acttgttgtt atgcctactc gtataatgga
1261 cctccccttt gtaaaggtgt ttatagaggt gagttaacaa aaagctttga atgtggattg
1321 ctngtttttg tgactaagac tgatggttcc cgtatacaaa ccagaaatga accatttacg
1381 ttaacccagc acaattataa taatattact ttagatagat gtgttgagta taatatatat
1441 ggtagagtcg gacaaggttt tattactaat gtaactaact atgccattaa ttataattat
1501 ttagctgatg gtggtatggc tattttagat acatctggcg ccatagacat cttcgttgta
1561 caaggtgaat atggtcttaa ttattacaag gtcaaccctt gtgaggatgt taatcagcag
1621 tttgtagttt ctggtggtaa attagtaggt attcttacgt cacgtaatga gactggctcg
1681 cagcctcttg aaaaccagtt ctatatcaaa atcattaatg gaactcgtcg ttctagacgt
1741 tctattactg ggaatgttac aaattgccct tatgtt
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