GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS IBAIBVS1 1776 bp ss-mRNA VRL 28-MAY-1991 DEFINITION Avian infectious bronchitis virus partial S gene for spike glycoprotein S1 subunit ACCESSION X52084 KEYWORDS S gene; glycoprotein; spike glycoprotein; spike glycoprotein S1 subunit. SOURCE Avian infectious bronchitis virus RNA. ORGANISM Avian infectious bronchitis virus Viridae; ss-RNA enveloped viruses; Positive strand RNA virus; Coronaviridae. REFERENCE 1 (bases 1 to 1776) AUTHORS Koch,G. JOURNAL Unpublished (1990) STANDARD full automatic REFERENCE 2 (sites) AUTHORS Koch,G. and Kant,A. TITLE Nucleotide and amino acid sequence of the S1 subunit of the spike glycoprotein of avian infectious bronchitis virus, strain D3896 JOURNAL Nucleic Acids Res. 18, 3063-3064 (1990) STANDARD full staff_review COMMENT SWISS-PROT; P17662; VGL2$IBVD3. *source: strain=D3896; From EMBL entry COIBVS1; dated 06-JUL-1990. FEATURES Location/Qualifiers CDS 127..>1776 /note="spike glycoprotein S1 subunit (AA 1-550)" /codon_start=127 misc_feature 1726..1740 /note="S1/S2 protein cleavage signal" BASE COUNT 505 a 283 c 353 g 634 t 1 others ORIGIN 1 atagtatatt tgacgttgct aagtttgatt tgaaattaaa agcaacgcca gttgtaaatt 61 tgaaaactga acacaagacc gacttagtag ttaatttact aaggaacggt aaattattgg 121 ttagagatgt tggagaagtc actgttatta gtgactcttt tgtttgcact atgtagtgct 181 aatctgtttg gtaataattc ttacgtgtac tactaccaaa gtgccttcag accacctaat 241 ggttggcatt tacatggtgg tgcttatgaa gtagtaaatg tttctacgga atctagtaat 301 gcaggcacga ctgagtgtac tgccggtgct atttattgga gtaagaattt cagtgctgct 361 tccgtggcta tgacagcacc tcaaaatggt atgttatggt ctactgcgca attttgtacg 421 gctcactgca attttactga ttttgtagta tttgttacac attgctataa aagtgcttct 481 ggttcatgtc ctttaacagg tctgattcca cagtatcata ttcgtatttc tgctatgaaa 541 aatagcagtt tgttttataa cttaacagtt gctgtgacta aatatcctag atttaagtcg 601 cttcagtgtg ttaataatat gacatctgta tacctaaatg gcgatctcgt ttttacttct 661 aacgagacta aagatgttag tgctgcaggt gttcatttta aagctggtgg ccctataact 721 tataaagtta tgcgggaagt taaagcattg gcttattttg ttaatggcac cgcacaagat 781 gtgattcttt gtgacggttc acctacaggt ttactagcat gtcagtataa tactggtaat 841 ttttcagatg gcttttatcc ttttactaat agtagtttag ttaaggaaaa gtttattgtt 901 tatcgtgaaa gtagtgttaa cactactttg gagttaacta atttcacttt ttctaatgta 961 agtaatgcta accctaacac agggggtgtc cataccatac aattatatca aaccagcaca 1021 gctcagagtg gtcattataa ttttaatttc tcctttctga gtagttttac ctataaggag 1081 tctgattata tgtatgggtc ttaccaccca agttgtaagt ttagactaga aactattaat 1141 aatggtttgt ggtttaactc actttccgtc tctcttggtt acggacctat tcaaggtggt 1201 tgtaagcaat ctgtgttcca aaatagggca acttgttgtt atgcctactc gtataatgga 1261 cctccccttt gtaaaggtgt ttatagaggt gagttaacaa aaagctttga atgtggattg 1321 ctngtttttg tgactaagac tgatggttcc cgtatacaaa ccagaaatga accatttacg 1381 ttaacccagc acaattataa taatattact ttagatagat gtgttgagta taatatatat 1441 ggtagagtcg gacaaggttt tattactaat gtaactaact atgccattaa ttataattat 1501 ttagctgatg gtggtatggc tattttagat acatctggcg ccatagacat cttcgttgta 1561 caaggtgaat atggtcttaa ttattacaag gtcaaccctt gtgaggatgt taatcagcag 1621 tttgtagttt ctggtggtaa attagtaggt attcttacgt cacgtaatga gactggctcg 1681 cagcctcttg aaaaccagtt ctatatcaaa atcattaatg gaactcgtcg ttctagacgt 1741 tctattactg ggaatgttac aaattgccct tatgtt //