GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS TGETGEVE1 957 bp ss-mRNA VRL 28-MAY-1991 DEFINITION TGEV genomic RNA for E1 matrix protein and nucleocapsid protein TGEV = Transmissible gastroenteritis virus ACCESSION X05598 KEYWORDS E1 membrane protein; matrix protein; transmembrane protein. SOURCE Transmissible gastroenteritis virus RNA. ORGANISM Transmissible gastroenteritis virus Viridae; ss-RNA enveloped viruses; Positive strand RNA virus; Coronaviridae. REFERENCE 1 (bases 1 to 957) AUTHORS Laude,H., Rasschaert,D. and Huet,J.-C. TITLE Sequence and N-terminal processing of the transmembrane protein E1 of the coronavirus transmissible gastroenteritis virus JOURNAL J. Gen. Virol. 68, 1687-1693 (1987) STANDARD full automatic COMMENT SWISS-PROT; P04135; VME1$CVPPU. *source: clone= pTG2.15.; strain=Purdue-115; Data kindly reviewed (28-JAN-1988) by Laude H. From EMBL entry COTGEVE1; dated 06-JUL-1989. FEATURES Location/Qualifiers misc_feature 110..119 /note="transcription initiation consensus sequence" CDS 121..171 /note="signal peptide (AA -17 to -1)" /codon_start=121 CDS 172..906 /note="mature E1 matrix protein (AA 1-245)" /codon_start=172 misc_feature 214..216 /note="pot.N-glycosylation site" misc_feature 283..285 /note="pot.N-glycosylation site" misc_feature 871..873 /note="pot.N-glycosylation site" misc_feature 908..917 /note="transcription initiation consensus sequence" CDS 922..>957 /note="nucleocapsid protein (AA 1-12)" /codon_start=922 BASE COUNT 279 a 164 c 213 g 301 t ORIGIN 1 gcaatttagg aaggacagtt attattgttc cagcgcaaca tgcttacgat gcctataaga 61 attttatgcg aattaaagca tacaaccccg atggagcact ccttgcttga actaaacaaa 121 atgaagattt tgttaatatt agcgtgtgtg attgcatgcg catgtggaga acgctattgt 181 gctatgaaat ccgatacaga tttgtcatgt cgcaatagta cagcgtctga ttgtgagtca 241 tgcttcaacg gaggcgatct tatttggcat cttgcaaact ggaacttcag ctggtctata 301 atattgatcg tttttataac tgtgctacaa tatggaagac ctcaattcag ctggttcgtg 361 tatggcatta aaatgcttat aatgtggcta ttatggcccg ttgttttggc tcttacgatt 421 tttaatgcat actcggaata ccaagtgtcc agatatgtaa tgttcggctt tagtattgca 481 ggtgcaattg ttacatttgt actctggatt atgtattttg taagatccat tcagttgtac 541 agaaggacta actcttggtg gtctttcaac cctgaaacta aagcaattct ttgcgttagt 601 gcattaggaa gaagctatgt gcttcctctc gaaggtgtgc caactggtgt cactctaact 661 ttgctttcag ggaatttgta cgctgaaggg ttcaaaattg cagatggtat gaacatcgac 721 aatttaccaa aatacgtaat ggttgcatta cctagcagga ctattgtcta cacacttgtt 781 ggcaagaagt tgaaagcaag tagtgcgact ggatgggctt actatgtaaa atctaaagct 841 ggtgattact caacagaggc aagaactgat aatttgagtg agcaagaaaa attattacat 901 atggtataac taaacttcta aatggccaac cagggacaac gtgtcagttg gggagat //