GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS TGETGEVE2 4660 bp ss-mRNA VRL 28-MAY-1991 DEFINITION Transmissible gastroenteritis virus (TGEV) mRNA for protein E2 ACCESSION X05695 KEYWORDS E2 protein; glycoprotein; peplomer protein; unidentified reading frame. SOURCE Transmissible gastroenteritis virus RNA. ORGANISM Transmissible gastroenteritis virus Viridae; ss-RNA enveloped viruses; Positive strand RNA virus; Coronaviridae. REFERENCE 1 (bases 1 to 4660) AUTHORS Rasschaert,D. and Laude,H. TITLE The Predicted Primary Structure of the Peplomer Protein E2 of the Porcine Coronavirus Transmissible Gastroenteritis Virus JOURNAL J. Gen. Virol. 68, 1883-1890 (1987) STANDARD full automatic COMMENT SWISS-PROT; P07946; VGL2$CVPPU. *strain= Purdue-15; From EMBL entry COTGEVE2; dated 06-JUL-1989. FEATURES Location/Qualifiers repeat_region 88..97 /note="direct repeat 1" CDS 121..4461 /note="put. E2 precursor (-16 t0 1431)" /codon_start=121 CDS 121..168 /note="pot. signal peptide (AA -16 to -1)" /codon_start=121 CDS 169..4461 /note="put. mature E2 (AA 1-1431)" /codon_start=169 repeat_region 4552..4561 /note="direct repeat 1" CDS 4583..>4660 /note="ORF (AA 1-26)" /codon_start=4583 BASE COUNT 1392 a 799 c 931 g 1538 t ORIGIN 1 gactatgtaa ttaaagaaaa agaattgaat gaaatggtca tggattacta aggaagggta 61 agttgctcat tagaaataat ggtaagttac taaactttgg taacacttcg ttaacacacc 121 atgaaaaaac tatttgtggt tttggtcgta atgccattga tttatggaga caattttcct 181 tgttctaaat tgactaatag aactataggc aaccagtgga atctcattga aaccttcctt 241 ctaaactata gtagtaggtt accacctaat tcagatgatg tgttaggtga ttattttcct 301 actgtacaac cttggtttaa ttgcattcgc aataatagta atgaccttta tgttacactg 361 gaaaatctta aagcattgta ttgggattat gctacagaaa atatcacttg gaatcacaga 421 caacggttaa acgtagtcgt taatggatac ccatactcca tcacagttac aacaacccgc 481 aattttaatt ctgctgaagg tgctattata tgcatttgta agggctcacc acctactacc 541 accacagaat ctagtttgac ttgcaattgg ggtagtgagt gcaggttaaa ccataagttc 601 cctatatgtc cttctaattc agaggcaaat tgtggtaata tgctgtatgg cctacaatgg 661 tttgcagatg aggttgttgc ttatttacat ggtgctagtt accgtattag ttttgaaaat 721 caatggtctg gcactgtcac atttggtgat atgcgtgcga caacattaga agtcgctggc 781 acgcttgtag acctttggtg gtttaatcct gtttatgatg tcagttatta tagggttaat 841 aataaaaatg gtactaccgt agtttccaat tgcactgatc aatgtgctag ttatgtggct 901 aatgttttta ctacacagcc aggaggtttt ataccatcag attttagttt taataattgg 961 ttccttctaa ctaatagctc cacgttggtt agtggtaaat tagttaccaa acagccgtta 1021 ttagttaatt gcttatggcc agtccctagc tttgaagaag cagcttctac attttgtttt 1081 gagggtgctg gctttgatca atgtaatggt gctgttttaa ataatactgt agacgtcatt 1141 aggttcaacc ttaattttac tacaaatgta caatcaggta agggtgccac agtgttttca 1201 ttgaacacaa cgggtggtgt cactcttgaa atttcatgtt atacagtgag tgactcgagc 1261 tttttcagtt acggtgaaat tccgttcggc gtaactgatg gaccacggta ctgttacgta 1321 cactataatg gcacagctct taagtattta ggaacattac cacctagtgt caaggagatt 1381 gctattagta agtggggcca tttttatatt aatggttaca atttctttag cacatttcct 1441 attgattgta tatcttttaa tttgaccact ggtgatagtg acgttttctg gacaatagct 1501 tacacatcgt acactgaagc attagtacaa gttgaaaaca cagctattac aaaggtgacg 1561 tattgtaata gtcacgttaa taacattaaa tgctctcaaa ttactgctaa tttgaataat 1621 ggattttatc ctgtttcttc aagtgaagtt ggtcttgtca ataagagtgt tgtgttacta 1681 cctagctttt acacacatac cattgttaac ataactattg gtcttggtat gaagcgtagt 1741 ggttatggtc aacccatagc ctcaacatta agtaacatca cactaccaat gcaggatcac 1801 aacaccgatg tgtactgtat tcgttctgac caattttcag tttatgttca ttctacttgc 1861 aaaagtgctt tatgggacaa tatttttaag cgaaactgca cggacgtttt agatgccaca 1921 gctgttataa aaactggtac ttgtcctttc tcatttgata aattgaacaa ttacttaact 1981 tttaacaagt tctgtttgtc gttgagtcct gttggtgcta attgtaagtt tgatgtagct 2041 gcccgtacaa gaaccaatga gcaggttgtt agaagtttgt atgtaatata tgaagaagga 2101 gacaacatag tgggtgtacc gtctgataat agtggtgtgc acgatttgtc agtgctacac 2161 ctagattcct gcacagatta caatatatat ggtagaactg gtgttggtat tattagacaa 2221 actaacagga cgctaattag tggcttatat tacacatcac tatcaggtga tttgttaggt 2281 tttaaaaatg ttagtgatgg tgtcatttac tctgtaacgc catgtgatgt aagcgcacaa 2341 gcagctgtta ttgatggtac catagttggg gctatcactt ccattaacag tgaactgtta 2401 ggtctaacac attggacaac aacacctaat ttttattact actctatata taattacaca 2461 aatgatagga ctcgtggcac tgcaattgac agtaatgatg ttgattgtga acctgtcata 2521 acctattcta acataggtgt ttgtaaaaat ggtgcttttg tttttattaa cgtcacacat 2581 tctgatggag acgtgcaacc aattagcact ggtaatgtca cgatacctac aaactttacc 2641 atatccgtgc aagtcgaata tattcaggtt tacactacac cagtgtcaat agactgttca 2701 agatatgttt gtaatggtaa ccctaggtgt aacaaattgt taacacaata cgtttctgca 2761 tgtcaaacta ttgagcaagc acttgcaatg ggtgccagac ttgaaaacat ggaggttgat 2821 tccatgttgt ttgtttctga aaatgccctt aaattggcat ctgttgaagc attcaatagt 2881 tcagaaactt tagaccctat ttacaaagaa tggcctaata taggtggttc ttggctagaa 2941 ggtctaaaat acatacttcc gtcccataat agcaaacgta agtatcgttc agctatagaa 3001 gacttgcttt ttgataaggt tgtaacatct ggtttaggta cagttgatga agattataaa 3061 cgttgtacag gtggttatga catagctgac ttagtatgtg ctcaatacta taatggcatc 3121 atggtgctac ctggtgtggc taatgctgac aaaatgacta tgtacacagc atcccttgca 3181 ggtggtataa cattaggtgc acttggtgga ggcgccgtgg ctataccttt tgcagtagca 3241 gttcaggcta gacttaatta tgttgctcta caaactgatg tattgaacaa aaaccagcag 3301 attctggcta gtgctttcaa tcaagctatt ggtaacatta cacagtcatt tggtaaggtt 3361 aatgatgcta tacatcaaac atcacgaggt cttgctactg ttgctaaagc attggcaaaa 3421 gtgcaagatg ttgtcaacat acaagggcaa gctttaagcc acctaacagt acaattgcaa 3481 aataatttcc aagccattag tagttctatt agtgacattt ataataggct tgacgaattg 3541 agtgctgatg cacaagttga caggctgatc acaggaagac ttacagcact taatgcattt 3601 gtgtctcaga ctctaaccag acaagcggag gttagggcta gtagacaact tgccaaagac 3661 aaggttaatg aatgcgttag gtctcagtct cagagattcg gattctgtgg taatggtaca 3721 catttgtttt cactcgcaaa tgcagcacca aatggcatga ttttctttca cacagtgcta 3781 ttaccaacgg cttatgaaac tgtgactgct tggccaggta tttgtgcttc agatggtgat 3841 cgcacttttg gacttgtcgt taaagatgtc cagttgactt tgtttcgtaa tctagatgac 3901 aagttctatt tgacccccag aactatgtat cagcctagag ttgcaactag ttctgacttt 3961 gttcaaattg aagggtgcga tgtgctgttt gttaatgcaa ctgtaagtga tttgcctagt 4021 attatacctg attatattga tattaatcag actgttcaag acatattaga aaattttaga 4081 ccaaattgga ctgtacctga gttgacattt gacattttta acgcaaccta tttaaacctg 4141 actggtgaaa ttgatgactt agaatttagg tcagaaaagc tacataacac cactgtagaa 4201 cttgccattc tcattgacaa cattaacaat acattagtca atcttgaatg gctcaataga 4261 attgaaacct atgtaaaatg gccttggtat gtgtggctac taataggctt agtagtaata 4321 ttttgcatac cattactgct attttgctgt tgtagtacag gttgctgtgg atgcataggt 4381 tgtttaggaa gttgttgtca ctctatatgt agtagaagac aatttgaaaa ttacgaacca 4441 attgaaaaag tgcacgtcca ttaaatttaa aatgttaatt ctatcatctg ctataatagc 4501 agttgtttct gctagagaat tttgttaagg atgatgaata aagtctttaa gaactaaact 4561 tacgagtcat tacaggtcct gtatggacat tgtcaaatcc atttacacat ccgtagatgc 4621 tgtacttgac gaacttgatt gtgcatactt tgctgtaaca //