GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS HS2HSV2P4 1649 bp ds-DNA VRL 28-MAY-1991 DEFINITION Herpes simplex virus type 2, p40k gene, the short unique region (Us) between the termination codon of glycoprotein D and the initiation codon of glycoprotein E. ACCESSION D00026 N00026 KEYWORDS 40 K protein; Herpes simplex virus type 2; US7; Us; short unique region. SOURCE Herpes simplex virus type 2 DNA. ORGANISM Herpes simplex virus type 2 Viridae; ds-DNA enveloped viruses; Herpesviridae; Alphaherpesvirinae. REFERENCE 1 (bases 1 to 1649) AUTHORS Hodgman,T.C. and Minson,A.C. TITLE The herpes simplex virus type 2 equivalent of the herpes simplex virus type 1 US7 gene and its flanking sequences JOURNAL Virology 153, 1-11 (1986) STANDARD full automatic COMMENT SWISS-PROT; P06764; VGLI$HSV23. HSV-2 had an equivalent to the US7 gene of HSV-1, referred to as p40k. The sequence of p40k gene was compared with US7. From EMBL entry HEHSV2P4; dated 19-SEP-1987. FEATURES Location/Qualifiers CDS <1..9 /note="glycoprotein D" /codon_start=1 CDS 211..1329 /note="p40k peptide" /codon_start=211 CDS 1647..>1649 /note="glycoprotein E" /codon_start=1647 BASE COUNT 261 a 583 c 503 g 302 t ORIGIN 1 ttttactaga ggagtatccc cgctcccgtg tacctctggg cccgtgtggg agggtggctg 61 gggtatttgg gtgggacttg gactccgcat aaagggagtc tcgaaggagg gaaactagga 121 cagttcatag gccgggagcg tggggcgcgc accgctgtcc cgacgattag ccaccgcgcc 181 cacagtcacc tcgacccgtc cgatcccggt atgcccggcc gctcgctgca gggcctggcg 241 atcctgggcc tgtgggtctg cgccaccggc ctggtcgtcc gcggccccac ggtcagtctg 301 gtctcagact cactcgtgga tgccggggcc gtggggcccc agggcttcgt ggaagaggac 361 ctgcgtgttt tcggggagct tcattttgtg ggggcccagg tcccccacac aaactactac 421 gacggcatca tcgagctgtt tcactacccc ctggggaacc actgcccccg cgttgtacac 481 gtggtcacac tgaccgcatg cccccgccgc cccgccgtgg cgttcacctt gtgtcgctcg 541 acgcaccacg cccacagccc cgcctatccg accctggagc tgggtctggc gcggcagccg 601 cttctgcggg ttcgaacggc aacgcgcgac tatgccggtc tgtatgtcct gcgcgtatgg 661 gtcggcagcg cgacgaacgc cagcctgttt gttttggggg tggcgctctc tgccaacggg 721 acgtttgtgt ataacggctc ggactacggc tcctgcgatc cggcgcagct tcccttttcg 781 gccccgcgcc tgggaccctc gagcgtatac acccccggag cctcccggcc cacccctcca 841 cggacaacga catccccgtc ctccccccga gacccgaccc ccgcccccgg ggacacaggg 901 acgcccgcgc ccgcgagcgg cgagagagcc ccgcccaatt ccacgcgatc ggccagcgaa 961 tcgagacaca ggctaaccgt agcccaggta atccagatcg ccataccggc gtccatcatc 1021 gcctttgtgt ttctgggcag ctgtatctgc ttcatccata gatgccagcg ccgatacagg 1081 cgcccccgcg gccagattta caaccccggg ggcgtttcct gcgcggtcaa cgaggcggcc 1141 atggcccgcc tcggagccga gctgcgatcc cacccaaaca ccccccccaa accccgacgc 1201 cgttcgtcgt cgtccacgac catgccttcc ctaacgtcga tagctgagga atcggagcca 1261 ggtccagtcg tgctgctgtc cgtcagtcct cggccccgca gtggcccgac ggccccccaa 1321 gaggtctagg tccaagcggg ccgttcggca ggcccgccca ccgcccccat cgtggttatt 1381 tcccccccaa taaaccgatg ttatttgcct atatgcgtgt gttggatccc tttgtgatcg 1441 ttcgtcattc cccggatggc atgggaggcg ggtaatggat gggcggggcc cgggggggga 1501 ggaaaaagaa taaagggggt agtgtcggag aggcccgccg cgcatttaag gagtcgccgc 1561 cccgactctg tgtcttcggg tgacttggtg cgccgccgtc agctagtctc cgatctgccc 1621 cgaccgacgg ctcctgccac ccgaacatg //