GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS HS2HSV2P4 1649 bp ds-DNA VRL 28-MAY-1991
DEFINITION Herpes simplex virus type 2, p40k gene, the short unique region
(Us) between the termination codon of glycoprotein D and the
initiation codon of glycoprotein E.
ACCESSION D00026 N00026
KEYWORDS 40 K protein; Herpes simplex virus type 2; US7; Us;
short unique region.
SOURCE Herpes simplex virus type 2 DNA.
ORGANISM Herpes simplex virus type 2
Viridae; ds-DNA enveloped viruses; Herpesviridae;
Alphaherpesvirinae.
REFERENCE 1 (bases 1 to 1649)
AUTHORS Hodgman,T.C. and Minson,A.C.
TITLE The herpes simplex virus type 2 equivalent of the herpes simplex
virus type 1 US7 gene and its flanking sequences
JOURNAL Virology 153, 1-11 (1986)
STANDARD full automatic
COMMENT SWISS-PROT; P06764; VGLI$HSV23.
HSV-2 had an equivalent to the US7 gene of HSV-1, referred to as
p40k. The sequence of p40k gene was compared with US7.
From EMBL entry HEHSV2P4; dated 19-SEP-1987.
FEATURES Location/Qualifiers
CDS <1..9
/note="glycoprotein D"
/codon_start=1
CDS 211..1329
/note="p40k peptide"
/codon_start=211
CDS 1647..>1649
/note="glycoprotein E"
/codon_start=1647
BASE COUNT 261 a 583 c 503 g 302 t
ORIGIN
1 ttttactaga ggagtatccc cgctcccgtg tacctctggg cccgtgtggg agggtggctg
61 gggtatttgg gtgggacttg gactccgcat aaagggagtc tcgaaggagg gaaactagga
121 cagttcatag gccgggagcg tggggcgcgc accgctgtcc cgacgattag ccaccgcgcc
181 cacagtcacc tcgacccgtc cgatcccggt atgcccggcc gctcgctgca gggcctggcg
241 atcctgggcc tgtgggtctg cgccaccggc ctggtcgtcc gcggccccac ggtcagtctg
301 gtctcagact cactcgtgga tgccggggcc gtggggcccc agggcttcgt ggaagaggac
361 ctgcgtgttt tcggggagct tcattttgtg ggggcccagg tcccccacac aaactactac
421 gacggcatca tcgagctgtt tcactacccc ctggggaacc actgcccccg cgttgtacac
481 gtggtcacac tgaccgcatg cccccgccgc cccgccgtgg cgttcacctt gtgtcgctcg
541 acgcaccacg cccacagccc cgcctatccg accctggagc tgggtctggc gcggcagccg
601 cttctgcggg ttcgaacggc aacgcgcgac tatgccggtc tgtatgtcct gcgcgtatgg
661 gtcggcagcg cgacgaacgc cagcctgttt gttttggggg tggcgctctc tgccaacggg
721 acgtttgtgt ataacggctc ggactacggc tcctgcgatc cggcgcagct tcccttttcg
781 gccccgcgcc tgggaccctc gagcgtatac acccccggag cctcccggcc cacccctcca
841 cggacaacga catccccgtc ctccccccga gacccgaccc ccgcccccgg ggacacaggg
901 acgcccgcgc ccgcgagcgg cgagagagcc ccgcccaatt ccacgcgatc ggccagcgaa
961 tcgagacaca ggctaaccgt agcccaggta atccagatcg ccataccggc gtccatcatc
1021 gcctttgtgt ttctgggcag ctgtatctgc ttcatccata gatgccagcg ccgatacagg
1081 cgcccccgcg gccagattta caaccccggg ggcgtttcct gcgcggtcaa cgaggcggcc
1141 atggcccgcc tcggagccga gctgcgatcc cacccaaaca ccccccccaa accccgacgc
1201 cgttcgtcgt cgtccacgac catgccttcc ctaacgtcga tagctgagga atcggagcca
1261 ggtccagtcg tgctgctgtc cgtcagtcct cggccccgca gtggcccgac ggccccccaa
1321 gaggtctagg tccaagcggg ccgttcggca ggcccgccca ccgcccccat cgtggttatt
1381 tcccccccaa taaaccgatg ttatttgcct atatgcgtgt gttggatccc tttgtgatcg
1441 ttcgtcattc cccggatggc atgggaggcg ggtaatggat gggcggggcc cgggggggga
1501 ggaaaaagaa taaagggggt agtgtcggag aggcccgccg cgcatttaag gagtcgccgc
1561 cccgactctg tgtcttcggg tgacttggtg cgccgccgtc agctagtctc cgatctgccc
1621 cgaccgacgg ctcctgccac ccgaacatg
//