GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS BNYBNYVV1 6746 bp ss-mRNA VRL 28-MAY-1991
DEFINITION Beet Necrotic Yellow Vein Virus complete RNA-1 with 237K ORF
ACCESSION X05147
KEYWORDS subgenome; unidentified reading frame.
SOURCE Beet necrotic yellow vein mosaic virus RNA.
ORGANISM Beet necrotic yellow vein mosaic virus
Viridae; ss-RNA nonenveloped viruses; Rod-shaped ss-RNA viruses;
Tobamovirus.
REFERENCE 1 (bases 1 to 6746)
AUTHORS Bouzoubaa,S., Quillet,L., Guilley,H., Jonard,G. and Richards,K.
TITLE Nucleotide sequence of Beet Necrotic Yellow Vein Virus RNA-1
JOURNAL J. Gen. Virol. 68, 615-626 (1987)
STANDARD full automatic
COMMENT *source: strain=isolate F2(for clone pBF5), isolate F13(other cl.)
*source: clone=pBF553, pBF541, pBF542, pBF5201, pBF5220, pBF51,
*source: clone=pBF5;
Data kindly reviewed (21-DEC-1987) by RICHARDS K.
From EMBL entry NCBNYVV1; dated 06-JUL-1989.
FEATURES Location/Qualifiers
CDS 154..6480
/note="237K ORF (AA 1-2109)"
/codon_start=154
BASE COUNT 1741 a 1042 c 1643 g 2320 t
ORIGIN
1 aaattcgatt cttcccattc gccatcattg aatcattact cgtgtactgg aacgcagtta
61 ggagtggctc caaagcatct tctttgaaaa tagattgcga agtgagttca cctaagacga
121 cgtcggtgtt ttacgagttt ttacataatc aacatggcag attcgttcgg ttttactcca
181 atggaggttt tgctttttgg tggtgaatcg gttcagttgt tgacttcaga catgcctatt
241 gatgtccagt ggggctttgt atactccact cgatgttatg ctctctggaa agacgacttg
301 attcatctca atccgctgtt gaaatattca cagcgaattg caaaacggtg ggaaaagtta
361 gtttcgggct ttgttggccc agtaccgctt gataagttgt tgtctttgtt ggcaaaactt
421 atgaggtatt gtgttaacat gggggtgtct gtacaggaga tatatttgtc tgatgctatt
481 gtttcatcgt cttatatgtt gcatgtgtct aggagtgcag gttgtgtgtc ttttagttgg
541 ttgtatgcta agttgtccat gttcgcttcg tgtggcaagt tctgggtagg gtcttcacat
601 cacacggctg ctaacatgat tgaaggttcc cgtgctgtga atggtccgga tgtggctatt
661 tctgagatgg ttgaagcctt ccatttagag gtgaagtcat cactcgttgt aactgtatct
721 ttgactccta gggagaaaaa gattttggag cgagagccag gttttgtgcc gttgtacaaa
781 cagaaaagta gagctccacg caatcaccca gtgctggctg ctcttcgtga ggttatgagg
841 caggagtatt ccgctagttg taatattctt aatacaaagt tgaaaacact ggtagttggt
901 gctgccagtc gtgaagttaa ttgttattcg tctaatccgt ctgtacatta ctattttgct
961 aataaagata gtaaggattt ggtaaggacc actctggagt tgttgcatag tgctttggct
1021 acaaagtacc gcaatatgga aagtggtgag cgagaactca tgaataattt gaagggttgt
1081 ggttatattg tcaaaaggtc ggtcgaaaac gctatctatg aggttgtttc cgataaagat
1141 gttgctgaag tgttaaggta tgcgcaaact gtcgcttcaa cgaagaaaga ggcgaaaagg
1201 aaacctaaca ctggaaagcg aaaaatggtc atgtcggaag caactcgtag aacaatcgaa
1261 ctgcatgagt tgtcgcgtat tgtagccgaa gagaagaaga ttcctaacca tttccacttt
1321 gatgaaagtg attttgcttc tgttggtaat tttactcagt tggtttgtga agatgttggt
1381 tacaattttt ctgtggatgc ttggttgcat ttgttcgagg tgaccggtgc gcagactgcc
1441 gttggttata tggcattgcc taatgaactt ttgtttgaac attatccaat atcagattat
1501 tatgattatt gggagggtgt tgaaaagcat ggttcattgg gtggtattac tatttcccct
1561 ttgcggaatg gacaggttgt tggtatgccg actggggttt ttcaacctgt tcattttgac
1621 aagacgtctg ctggtttagg tattcctggt tcaaagatgg gtactgctga acgtgttata
1681 tgtcacatgt cagatggact tggaaatggc tacaatcatg ttaaaagtga ttggcagacg
1741 ttgttgaaac atcctatttt gtcttcttca aagtataatt ttgctgttga agtggattta
1801 acgggacgtt atggttgtct tgccaccttt cggttaactc gtgtgactgg agtcaagtat
1861 gttgctagaa ctataaaatt gcgtccagaa gataggtatg ttcgggtatt ggatttgtta
1921 catattgtgc gtagtattag gttgaaaggg catgccggtt tgaaagaacc ttatcagtat
1981 tttcctgtgt ataaacgtga ggtagatacg acggtgtctt actgtttttc tattgctgaa
2041 aaatcgttga cagtacaaaa cattgctaat tttattagac atcacattgg tggtgtttct
2101 ttagttaaca aagaattagt atcggcgtgg cgtttgaatc cgcaacttgt tccttcgttc
2161 gcatatgccg tttactttta tgttgttaat ttgagaggtg agttggatgg gatgttgcag
2221 aagttaatga aaaagggtat cacatgggca gataggttga aggctaatgt ttcagcgttt
2281 ttgcgagata tggtagatcc tattagtttt ttgtggacgt ggttatttga gagaagatta
2341 gtcgatcaaa tttttcagga tgggactgat gttttttacc agatggatcg tgcttgtgtt
2401 gatgagaagg cattgcgttt gaacgatcac attaaaatta cacgagattt tttgcctgct
2461 gacactttac ttcctgaagg atggtcttta gacgattggg aaaaagctcc cgatagtttg
2521 aagactcttt cggcagctgc ttcgttgcca gtagagtgcg gggcggtaaa ttgtgttggt
2581 aagtcgttta agagcgtgcg tactctatta ccaccatctg ttgttacttc acctgttgag
2641 cagtttttca aatctggtgg taaatttaga gatgatgccg agtttgcaga attgttgagt
2701 gcgcactatc gctggcagat ggacaattct ttttgtgctt gtcaggtttg tgctgctttg
2761 actggtaaaa cgggttctca agttgttgaa tgcagatgga aagatgagtc tatgtataca
2821 ttttctatgt cacaaactga ggttgatgat tttagaaatg agattaaggc tcaatctatt
2881 gaaaagggaa atcgttttgg tgaattgcta ataggtgtac atcagaaaat tcctacacaa
2941 gcctttgagg tttcagttcg actcgaatat gttaaaggtg ggcctggtac gggtaaatct
3001 tttcttataa gatcattggc cgaccctatt agggatcttg tggttgctcc gttcataaaa
3061 ttgcgttctg attatcagaa tcaacgagtt ggtgatgagc ttctttcttg ggactttcac
3121 acgcctcaca aagcattgga tgttactggt aagcaaatta tttttgttga tgagtttaca
3181 gcctacgatt ggcgtttact agctgtgttg gcttatagaa atcatgccca tactatttac
3241 ttagttggtg atgagcagca gactggtatt caagagggtc gtggagaagg aatttcgata
3301 cttaacaaaa ttgatttgtc taaggtttct acacatgttc caatcatgaa ctttagaaat
3361 cctgtccatg atgttaaggt attaaattat ctgtttgggt ctcgtatggt tcctatgtct
3421 tccgttgaaa agggatttag tttcggggat attaaagaat tttcgtcttt gtcaaatatc
3481 ccagacacta aaatcattca ttattccgat gagactggtg agcatatgat gcctgattac
3541 gttaggggag tgtcaaaaac tactgtccgt gctaatcagg gtagtaccta cgataatgtt
3601 gttttgcctg ttttgccatc tgatttgaaa ctgattaact cagctgagtt aaatctggta
3661 gctttatctc gtcacaggaa taagttaacc attttattgg acaatgatgg tatgaatatt
3721 ggtgctgttt tgaaaggcat gcttgagggt gtgccggaag aactcgaaag aagggattac
3781 attgttggga tgtaccttgg gttacattta cctattaaga aagagttctt ctttcctgag
3841 tctgagtttg ctaagtcgtt tagattaatg gttgctaagt atgaggcatt cgtaccttac
3901 gatagtgatc tgccaacttt ggtttcacaa ggagatgtcg ttgttttgga catagcacgt
3961 gtggaaaacg atattaatga tgcctttgat tgtgcagatt tctataatct tgtgtctcgt
4021 cctaacaatt gtttagtggt agctatttca gaatgtttag gtgtgacgct agaaaaattg
4081 gacaatctta tgcaagctaa cgctgtgacg cttgataagt atcacgcgtg gttgtctaag
4141 aagtctccat caacttggca agactgtaga atgtttgccg atgctctgaa ggtttccatg
4201 tacgttaagg ttttatctga caaaccttac gatttaactt atgaggttga tggggctggt
4261 tcctcagtga cattatattt aactggtaag gaaagcgatg ggcattttat tgctgcccca
4321 cttagttcgt cgctttctac caatgagaga gagtccggag ataatagtaa gaaaccggct
4381 gatgattctg acacctttga tgctgctaat ttgtttgctg acaagggtgt ttcttccgct
4441 gatatggagg ctttttgtgc ctatttagaa aagactttaa tggcaacaat tatgaagtat
4501 gatttgagct tgcaatcgtg ggctaatgtg gttgatgata ctgacgattt ttatcaaatc
4561 aatatttctg agtttcgtca gtccacgtgt tttggtaaat tgttgtcagc gcttgaagtt
4621 ttgaaggttg atgtttcgag gaagaggttt atatctgatt ggttgtgtaa aaatcttgag
4681 aataaacaat tccggtggcg ttggtcttct agtgtggctt cagctagttc ggccgggtcg
4741 aatgtcgacg atgattttgt caatatggca gggggaaaga ctgatgctaa tgctgatcct
4801 gctgatgttt tgaggcagag ttttatggat tatgcatcgg aatttgttcc tatccttatc
4861 gctgaatcac caatatttat gccgttggtt gagcctgaac caatattgtc caagtgtatg
4921 gtgcctgagt ttgacgcctt tttgttaata aaggaatttg atttggacaa tggtgctgat
4981 gagtatcaat gcgcttatct taatgaatct gttgctaatc gtattggtga caaatttgtt
5041 tcgggtgttt tagacactga tattatatct ccattaaatc tgaggggaca tcctattgct
5101 gaaaatgtta aatatcacag catgtgtgtg gccccggctc agatatattt taagcggaat
5161 cagtggcaag aattgcaggt tcaacaggct cggtacttat ttcgaaaagt gagaaattct
5221 ccatcatcga cacaagatag tgttgcacgt atggttgctc agctatttgt ttctgattgt
5281 ttggtgccaa atgtagctga tactttttct gcttccaatt tgtggcgaat tatggacaaa
5341 gctatgcatg acatggtcgc aaaaaattac caaggccaaa tggaagagga gtttacgcgt
5401 aatgctaaac tatatcgttt tcagttgaag gatattgaaa aacctttgaa ggacccagag
5461 actgatttgg caaaggctgg tcaagggata ttggcatggt ctaaggaggc acatgttaag
5521 tttatggttg cttttagagt tttaaatgat ttgttattga agtcattaaa ctctaatgtt
5581 gtttacgata acacaatgtc tgagaccgaa tttgttggaa aaataaatgc cgccatgaat
5641 acagtaccag atagtgctat aaacggggtt atcgatgctg ctgcttgcga ttctgggcaa
5701 ggggttttca cccaattgat agaaagacat atttatgctg ctttgggcat ttctgacttc
5761 tttttggatt ggtatttctc atttcgtgag aaatatgtta tgcagtccag atatgtcaga
5821 gcacatatgt cttatgttaa gactagtgga gaacccggca ctttgcttgg taataccatt
5881 ttaatgggtg ctatgttaaa tgctatgctt cgtgggaccg gaccattttg tatggccatg
5941 aagggcgatg atggttttaa aaggcaggct aatttgaaaa ttaacgatca aatgttaaag
6001 ttgattaaaa aggaaactgt cttggatttc aaattggatt taaatgttcc tatcactttt
6061 tgtggttatg ctttatctaa tggacatttg tttccaagtg tttcgcgtaa attgacgaag
6121 atagcagcac acaggttccg tgagtataag catttttgtg aataccagga atctttgcgt
6181 gattggatta aaaatcttcc caaagaccca gctgtttatg ctgatttttt ggagtgtaac
6241 gctagcttat cttgtcgcaa tgttgatgat gttcaacgtt ggttggatgc tattatctct
6301 gtgtctcgaa tcgggcgtga gcaatttatg atgatgttcc cgatacggga agtttttatg
6361 tcattgccac ccgttgagga tagtttgggt gaattatctt ctacgaaagt ggctgtgtct
6421 attggcgaca atgtttctaa tgttgttaga aaggttgctc gtgttgatat gaaaaagttt
6481 taatgtgtaa tatggtaata taatacgttg tacacttgtg agtagtataa gttttaaaat
6541 aaataaaggc catgccacag gcctcctatc ttgatgaagg ttgttgtggt tttctcgtta
6601 ctgttttatt attgtttgag ttgcttatgt tggttcttga ttatgtggta cataattatt
6661 gaactaattg tttgttgggt tgtaatgtac tgactgggtg tgaattgtac cagtcattaa
6721 agggtttact atcagtatat tgatat
//