GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS FLBFLBS27 1187 bp ss-mRNA VRL 28-MAY-1991 DEFINITION Influenza B/Singapore/222/79 virus, membrane protein (seg 7), complete genome. ACCESSION D00052 N00052 KEYWORDS Influenza B/Singapore/222/79; M; M1; M2; complete genome; influenza B virus; membrane protein. SOURCE Influenza virus type B RNA. ORGANISM Influenza virus type B Viridae; ss-RNA enveloped viruses; Negative strand RNA viruses; Orthomyxoviridae; Influenzavirus. REFERENCE 1 (bases 1 to 1187) AUTHORS Hiebert,S.W., Williams,M.A. and Lamb,R.A. TITLE Nucleotide sequence of RNA segment 7 of influenza B/Singapore/222/79: Maintenance of a second large open reading frame JOURNAL Virology 155, 747-751 (1986) STANDARD full automatic COMMENT SWISS-PROT; P06816; VMT1$INBSI. SWISS-PROT; P08383; VMT2$INBSI. In [1], a second large open reading frame is also found (nucleotides 513-1100). This region could encode a maximum of 195 amino acids although the size of a putative protein depends on whether the mRNA is spliced and the subsequent location of the initiation codon. The second open reading frame on RNA segment 7 is conserved as a feature of influenza B viruses and is not peculiar to B/Lee/40. It suggests that this region is important in the replicative cycle of influenza B viruses (discussed in [1]). From EMBL entry ORFLBS27; dated 25-APR-1990. FEATURES Location/Qualifiers CDS 25..771 /note="M1 protein" /codon_start=25 BASE COUNT 442 a 197 c 268 g 280 t ORIGIN 1 agcagaagca ggcactttct taaaatgtcg ctgtttggag acacaattgc ctacctgctt 61 tcattgacag aagatggaga aggcaaagca gaactagcag aaaaattaca ctgttggttc 121 ggtgggaaag aatttgacct agactctgct ttggaatgga taaaaaacaa aagatgccta 181 actgatatac agaaagcact aattggtgcc tctatctgct ttttaaaacc caaagaccaa 241 gaaagaaaaa gaagattcat cacagagccc ctatcaggaa tgggaacaac agcaacaaaa 301 aagaaaggcc tgattctagc tgagagaaaa atgagaagat gtgtgagttt tcatgaagca 361 tttgaaatag cagaaggcca tgaaagctca gcgctactat attgtctcat ggtcatgtac 421 ctgaaccgtg gaaattattc aatgcaagta aaactaggaa cgctctgtgc tttgtgcgag 481 aaacaagcat cacattcaca cagggctcat agcagagcag caagatcttc agtgcctgga 541 gtgaggcgag aaatgcagat ggtttcagct atgaacacag caaaaacaat gaatggaatg 601 gggaagggag aagacgtcca aaaactggca gaagagctgc aaagcaacat tggagtattg 661 agatctctgg gggcaagtca aaagaatggg gaaggaattg caaaggatgt aatggaagtg 721 ctaaagcaga gctctatggg aaattcagct cttgtgaaga aatacctata atgcttgaac 781 catttcagat tctttcaatt tgttctttca tcttatcagc tctccatttc atggcttgga 841 caatagggca tttgaatcaa ataaaaagag gagtaaacct gaaaatacga ataagaaatc 901 caaataaaga gacaataaac agagaggtat caattttgag acacagttac caaaaagaaa 961 tccaagccaa agaaacaatg aaggaagtac tctctgacaa catggagata ttgagtgacc 1021 acatagtaat tgaggggctt tctgctgaag agataataaa aatgggtgaa acagttttgg 1081 aggtagaaga attgcattaa actcaatttt caccgtattt cttgctatgc attaagcaaa 1141 ttgtaatcaa tgtcagcaaa taaactggaa aaagtgcgtt gtttcta //