GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS FLBFLBS27 1187 bp ss-mRNA VRL 28-MAY-1991
DEFINITION Influenza B/Singapore/222/79 virus, membrane protein (seg 7),
complete genome.
ACCESSION D00052 N00052
KEYWORDS Influenza B/Singapore/222/79; M; M1; M2; complete genome;
influenza B virus; membrane protein.
SOURCE Influenza virus type B RNA.
ORGANISM Influenza virus type B
Viridae; ss-RNA enveloped viruses; Negative strand RNA viruses;
Orthomyxoviridae; Influenzavirus.
REFERENCE 1 (bases 1 to 1187)
AUTHORS Hiebert,S.W., Williams,M.A. and Lamb,R.A.
TITLE Nucleotide sequence of RNA segment 7 of influenza
B/Singapore/222/79: Maintenance of a second large open reading
frame
JOURNAL Virology 155, 747-751 (1986)
STANDARD full automatic
COMMENT SWISS-PROT; P06816; VMT1$INBSI. SWISS-PROT; P08383; VMT2$INBSI.
In [1], a second large open reading frame is also found
(nucleotides 513-1100). This region could encode a maximum of 195
amino acids although the size of a putative protein depends on
whether the mRNA is spliced and the subsequent location of the
initiation codon. The second open reading frame on RNA segment 7 is
conserved as a feature of influenza B viruses and is not peculiar
to B/Lee/40. It suggests that this region is important in the
replicative cycle of influenza B viruses (discussed in [1]).
From EMBL entry ORFLBS27; dated 25-APR-1990.
FEATURES Location/Qualifiers
CDS 25..771
/note="M1 protein"
/codon_start=25
BASE COUNT 442 a 197 c 268 g 280 t
ORIGIN
1 agcagaagca ggcactttct taaaatgtcg ctgtttggag acacaattgc ctacctgctt
61 tcattgacag aagatggaga aggcaaagca gaactagcag aaaaattaca ctgttggttc
121 ggtgggaaag aatttgacct agactctgct ttggaatgga taaaaaacaa aagatgccta
181 actgatatac agaaagcact aattggtgcc tctatctgct ttttaaaacc caaagaccaa
241 gaaagaaaaa gaagattcat cacagagccc ctatcaggaa tgggaacaac agcaacaaaa
301 aagaaaggcc tgattctagc tgagagaaaa atgagaagat gtgtgagttt tcatgaagca
361 tttgaaatag cagaaggcca tgaaagctca gcgctactat attgtctcat ggtcatgtac
421 ctgaaccgtg gaaattattc aatgcaagta aaactaggaa cgctctgtgc tttgtgcgag
481 aaacaagcat cacattcaca cagggctcat agcagagcag caagatcttc agtgcctgga
541 gtgaggcgag aaatgcagat ggtttcagct atgaacacag caaaaacaat gaatggaatg
601 gggaagggag aagacgtcca aaaactggca gaagagctgc aaagcaacat tggagtattg
661 agatctctgg gggcaagtca aaagaatggg gaaggaattg caaaggatgt aatggaagtg
721 ctaaagcaga gctctatggg aaattcagct cttgtgaaga aatacctata atgcttgaac
781 catttcagat tctttcaatt tgttctttca tcttatcagc tctccatttc atggcttgga
841 caatagggca tttgaatcaa ataaaaagag gagtaaacct gaaaatacga ataagaaatc
901 caaataaaga gacaataaac agagaggtat caattttgag acacagttac caaaaagaaa
961 tccaagccaa agaaacaatg aaggaagtac tctctgacaa catggagata ttgagtgacc
1021 acatagtaat tgaggggctt tctgctgaag agataataaa aatgggtgaa acagttttgg
1081 aggtagaaga attgcattaa actcaatttt caccgtattt cttgctatgc attaagcaaa
1141 ttgtaatcaa tgtcagcaaa taaactggaa aaagtgcgtt gtttcta
//