GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS FLCFLCGL5 934 bp ss-mRNA VRL 28-MAY-1991 DEFINITION Influenza C/Great Lakes/1167/54 virus, NS protein (seg 7), complete genome. ACCESSION D00030 N00030 KEYWORDS Great Lakes/1167/54; Influenza C virus; NS; comp/ete genome. SOURCE Influenza virus type C RNA. ORGANISM Influenza virus type C Viridae; ss-RNA enveloped viruses; Negative strand RNA viruses; Orthomyxoviridae. REFERENCE 1 (bases 1 to 934) AUTHORS Buonagurio,D.A., Nakada,S., Fitch,W.M. and Palese,P. TITLE Epidemiology of influenza C virus in man: Multiple evolutionary lineages and low rate of change JOURNAL Virology 153, 12-21 (1986) STANDARD full automatic COMMENT SWISS-PROT; P06822; VNST$INCGL. The nucleotide sequences of nonstructural protein (NS) genes of human influenza C viruses isolated between 1947 and 1983 were determined and compared. In [1], the first 40 nucleotides at the 5' end of the plus sense cDNA could not be determinded by direct RNA sequencing using the dideoxy chain termination method. The position of the initiation codon for NS1 and NS2 proteins is indicated putatively by comparing with the sequence of the previously reported C/CAL/78 virus NS gene. From EMBL entry ORFLCGL5; dated 19-SEP-1987. FEATURES Location/Qualifiers CDS 27..887 /note="NS1 peptide" /codon_start=27 CDS 27..213 /note="NS2 peptide" /codon_start=27 CDS 527..705 /codon_start=527 BASE COUNT 314 a 164 c 170 g 246 t 40 others ORIGIN 1 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn agtcaaatca acaaatttaa 61 tggcatttgt agccacaaaa atgttagaga ggcaagaaga tttagacaca tgcactgaaa 121 tgcaagtaga aaaaatgaaa acgtcaacaa aagccaggtt gagaacagaa tcctcttttg 181 cacctagaac atgggaagat gcaataaaag atggtgagct tctattcaac gggacgattc 241 tgcaagcaga gtctcctaca atgacgccag cgtccgtaga aatgaagggg aagaaatttc 301 ctattgattt tgctccaagc aacatagcac caattgggca aaatccaata tatttgtcac 361 catgtattcc taactttgat ggaaacgtct gggaagcaac gatgtatcat catcgtggag 421 caactttgac aaagacaatg aattgcaact gctttcaaag aacaatttgg tgccatccaa 481 attcttcacg tatgagattg agctatgcat ttgttttgta ttgcagaaat actaagaaga 541 tctgtggata cctcatcgct agacaagtgg ccggaattga aacaggaatt agaaaatgtt 601 tcagatgcat taaaagcgga ttcgttatgg ctaccgatga aatctctctc actatactcc 661 aaagtatcaa atcaggagct cagctcgatc cctattggga aatgaaacac cagatattga 721 caagactgaa gcttatatgc tctcgcttag agaaactgga ccttaacctg agcaaagcag 781 tcttaggaat ccaaaattct gaagatctta ttttgatcat atataacaga gatgtttgta 841 aaaacactat attaatgata aaatctttgt gtaattcact tatataattg ttttaagttg 901 ttattccaaa gttaaaaatc cccttgctcc tgct //