GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS FLAFLD678 1565 bp ss-mRNA VRL 28-MAY-1991
DEFINITION Influenza A/Mallard/NY/6750/78 (H2N2) virus, nucleoprotein (seg 5),
complete genome.
ACCESSION D00050 N00050
KEYWORDS A/Mallard/78; Influenza A/Mallard/NY/6750/78; NP; complete genome;
nucleoprotein.
SOURCE Influenza virus type A RNA.
ORGANISM Influenza virus type A
Viridae; ss-RNA enveloped viruses; Negative strand RNA viruses;
Orthomyxoviridae; Influenzavirus; Influenza A viruses.
REFERENCE 1 (bases 1 to 1565)
AUTHORS Buckler-White,A.J. and Murphy,B.R.
TITLE Nucleotide sequence analysis of the nucleoprotein gene of an avian
and a human influenza virus strain identifies two classes of
nucleoproteins
JOURNAL Virology 155, 345-355 (1986)
STANDARD full automatic
COMMENT SWISS-PROT; P06826; VNUC$INAMN.
The sequence of RNA segment 5 was determined from virion RNA by the
primer extension method using dideoxynucleotides and reverse
transcriptase, except for nucleotides 1-16 and 1564, which could
not be determined by this method. By comparing the sequence with
those of other influenza strains, it was indicated that there are
separate classes of avian and human influenza A NP genes that can
be distinguished on the basis of sites containing amino acids
specific for avian and human influenza viruses and also by amino
acid composition.
From EMBL entry ORFLD678; dated 19-SEP-1987.
FEATURES Location/Qualifiers
CDS 46..1542
/note="NP"
/codon_start=46
BASE COUNT 489 a 315 c 410 g 334 t 17 others
ORIGIN
1 nnnnnnnnnn nnnnnnataa tcactcactg agtgacatca acatcatggc gtctcaaggc
61 accaaacgat cttatgaaca gatggaaact ggtggggaac gccagaatgc cactgaaatc
121 agagcatctg ttgggagaat ggttggtgga atcgggaggt tctacataca gatgtgcact
181 gaactcaaac tcagcgacta tgaagggagg ctgatccaga acagcatcac aatagagaga
241 atggttctct cagcatttga tgaaaggaga aacaaatatc tagaagagca tcccagtgct
301 gggaaggatc ctaagaagac tggaggtcca atctacagga ggagagatgg aaaatgggtg
361 agagaattga tcctgtatga taaagaagag gtcagaagga tttggcgtca agcaaataat
421 ggggaagacg caactgctgg tctcactcat ctaatgattt ggcattccaa tctgaatgat
481 gccacatacc agagaacaag ggctcttgtg cgtactggga tggatcccag gatgtgctct
541 ctgatgcaag gctcaactct tccaagaaga tctggagccg ctggagcagc agtgaaagga
601 gtcggaacaa tggtgatgga attgattcgg atgatcaaac gaggaatcaa tgatcgtaac
661 ttttggagag gcgaaaatgg acggagaaca agaattgctt acgagagaat gtgcaacatc
721 cttaaaggga aattccaaac agcagcacaa cgagcaatga tggaccaggt gcgggaaagc
781 cggaatcctg ggaatgctga gattgaagat ctcatctttc ttgcacggtc tgctctcatt
841 ttgaggggat cagtggctca taagtcctgc ctgcctgctt gtgtgtacgg acttgctgtg
901 gccagcggat acgattttga gagagaggga tactccctag ttggaattga tcctttccgt
961 ctgcttcaaa acagccaagt cttcagcctt atcagaccaa atgaaaatcc agcacataaa
1021 agccagctgg tatggatggc atgccactct ccagcatttg aagatctgag agtatcaagc
1081 ttcatcagag gaacaagagt ggttccaaga ggacagctgt ccaccagagg ggttcagatt
1141 gcttcaaatg agaacatgga gacaatggac tccagtactc ttgaattgag aagcagatac
1201 tgggctataa gaaccagaag cggagggaac accaaccagc agagagcatc tgcaggacaa
1261 atcagcgtac agcccacatt ctctgtgcag agaaacctcc cattcgagag agcaaccatt
1321 atggcagcat ttacaggaaa cactgaaggc agaacttcag acatgagaac tgaaatcata
1381 aggatgatgg aaaatgccag acctgaagat gtgtctttcc aggggcgggg agtcttcgag
1441 ctctcggacg aaaaggcgac gaacccgatc gtgccttcct ttgacatgag taacgaagga
1501 tcttatttct tcggagacaa tgcagaggag tatgacaatt aaagaaaaat acccttgttt
1561 ctacn
//