GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS VACVACC1 967 bp ds-DNA VRL 28-MAY-1991
DEFINITION Vaccinia virus DNA fragment of the inverted terminal repetition
region
ACCESSION X01541
KEYWORDS direct repeat; terminal repeat.
SOURCE Vaccinia virus DNA.
ORGANISM Vaccinia virus
Viridae; ds-DNA enveloped viruses; Poxviridae; Orthopoxvirus.
REFERENCE 1 (bases 1 to 967)
AUTHORS Baroudy,B.M. and Moss,B.
TITLE Sequence homologies of diverse length tandem repetitions near ends
of vaccinia virus genome suggest unequal crossing over
JOURNAL Nucleic Acids Res. 10, 5673-5679 (1982)
STANDARD full automatic
COMMENT From EMBL entry ORVACC1; dated 28-JAN-1986.
FEATURES Location/Qualifiers
repeat_region 1..70
/note="70 bp direct repeat"
repeat_region 57..182
/note="125 bp direct repeat"
repeat_region 183..306
/note="125 bp direct repeat"
repeat_region 307..738
/note="region of 8 perfect 54 bp direct repeats"
repeat_region 739..753
/note="partial 54 bp direct repeat"
repeat_region 754..789
/note="imperfect partial 70 bp direct repeat"
repeat_region 790..796
/note="7 bp direct repeat"
repeat_region 797..814
/note="region of 3 perfect 6 bp repeats"
BASE COUNT 416 a 87 c 179 g 285 t
ORIGIN
1 tcgaagagag aaagagataa aactttttta cgactccatc agaaagaggt ttaatatttt
61 tgtgagacca tcgaagagag aaagagaata aaaatatttt atgactccat tgaagagaga
121 aagagaaaat gagaatgaga ataaaaatat tttagtgaca ccatcagaaa gaggtttaat
181 atttttgtga gaccatcgaa gagagaaaga gaataaaaat attttatgac tccattgaag
241 agagaaagag aaaatgagaa tgagaataaa aatattttag tgacaccatc agaaagaggt
301 ttaatatttt ttatgagacc atcaaagaga gaaagagaat aaaaatattt ttgtaaaact
361 ttttttatga gaccatcaaa gagagaaaga gaataaaaat atttttgtaa aacttttttt
421 atgagaccat caaagagaga aagagaataa aaatattttt gtaaaacttt ttttatgaga
481 ccatcaaaga gagaaagaga ataaaaatat ttttgtaaaa ctttttttat gagaccatca
541 aagagagaaa gagaataaaa atatttttgt aaaacttttt ttatgagacc atcaaagaga
601 gaaagagaat aaaaatattt ttgtaaaact ttttttatga gaccatcaaa gagagaaaga
661 gaataaaaat atttttgtaa aacttttttt atgagaccat caaagagaga aagagaataa
721 aaatattttt gtaaaacttt ttttatgaga ccaacagaaa gaggtttaat atttttgtga
781 taccctgaaa ggaaatagga ataggaatag gaatagtgtc ataatcgtat cacactattg
841 agacagaaaa agaagaagtc gcgagaggta actttttgtg aatgtagtta agaacatttt
901 tgttttgcaa accggaatat agtgtccggt acactttttt aattcgtggt gtgcctgaat
961 cgttcga
//