GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS HRVHRV2 1425 bp ss-mRNA VRL 28-MAY-1991
DEFINITION Human rhinovirus strain 2 genome 3'-terminal region (HRV 2)
ACCESSION X00778
KEYWORDS RNA polymerase; polymerase.
SOURCE Human rhinovirus RNA.
ORGANISM Human rhinovirus
Viridae; ss-RNA nonenveloped viruses; Isometric ss-RNA viruses;
Picornaviridae; Rhinovirus.
REFERENCE 1 (bases 1 to 1425)
AUTHORS Skern,T., Sommergruber,W., Blaas,D., Pieler,C. and Kuechler,E.
TITLE Relationship of human rhinovirus strain 2 and poliovirus as
indicated by comparison of the polymerase gene regions
JOURNAL Virology 136, 125-132 (1984)
STANDARD full automatic
REFERENCE 2 (bases 80 to 81)
AUTHORS Kuechler,E.
JOURNAL Unpublished (1985)
STANDARD full automatic
COMMENT Data kindly reviewed (12-SEP-1985) by Kuechler E.
From EMBL entry PIHRV2; dated 06-JUL-1989.
FEATURES Location/Qualifiers
CDS <1..1383
/note="put. polyprotein"
/codon_start=1
misc_feature 3..4
/note="viral protease cleavage site"
CDS 4..1383
/note="put. RNA polymerase"
/codon_start=4
old_sequence 80..81
/note="AG is GA in ref. [1]"
/citation=[1]
polyA_site 1425..1425
/note="polyadenylation site"
BASE COUNT 497 a 232 c 271 g 425 t
ORIGIN
1 cagggccaaa taacgttatc aaagaagacc agtgaatgta acctacccag tatacacacc
61 ccatgcaaaa ccaaattgca gcctagtgtt ttctatgatg tattccctgg ttcaaaagaa
121 ccagctgtgt tgtctgaaaa agatgcccgg ttacaagttg atttcaatga agcactattt
181 tctaaataca aagggaatac agattgctcc attaatgacc acataagaat tgcatcatca
241 cattatgcag cacaactcat taccttagat attgacccaa aacctattac acttgaggac
301 agtgtctttg gcactgatgg attagaggct cttgatttga acactagcgc aggatttcca
361 tatattgcaa tgggagttaa aaagagagat ttaataaaca acaagaccaa ggatataagc
421 aaacttaaag aagcaattga caaatacgga gttgacttac ctatggtcac cttcttgaaa
481 gatgaactca gaaagcatga aaaggtaatt aaaggtaaaa ctagagttat tgaagctagt
541 agtgtgaatg ataccctatt atttagaaca acttttggca acctcttttc aaagttccac
601 ttgaatcctg gaattgttac tggatcagca gttggatgtg atccagaggt gttttggtca
661 aaaataccag caatgttgga tgataaatgt attatggctt ttgattatac aaattatgat
721 ggtagtatac accctatttg gtttgaagct cttaaacagg tactggtaga tctatcattt
781 aatccaacat taatagatag actatgcaag tctaaacaca tcttcaaaaa tacatactat
841 gaagtggagg gaggtgtacc atctgggtgt tcaggtacta gtatttttaa cactatgatc
901 aataatatta tcataaggac cttagtgtta gatgcataca agaatataga tctagataag
961 cttaagataa ttgcctatgg tgatgatgtc atattctcat acatacatga actggacatg
1021 gaggctatag caatagaggg tgttaaatat ggtttgacta taactcctgc tgataaatct
1081 aacacatttg taaaattaga ctatagcaat gttacttttt taaaaagagg gtttaagcaa
1141 gatgagaagt ataactttct aatacatcca actttccctg aagatgaaat atttgaatcc
1201 atcagatgga caaagaaacc atcacaaatg catgaacatg tgttgtctct gtgtcactta
1261 atgtggcaca atggacgtga cgcatacaaa aaatttgtgg agaagatacg cagtgtaagc
1321 gctggtcgtg cactgtacat ccctccgtat gatttgcttt tgcatgagtg gtatgaaaaa
1381 ttttaaagat atagaaatag taaactgata gtttattagt tttat
//